RNA–Protein interactions for RNA: ENST00000461489.1

COL21A1-205, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 4

Gene COL21A1, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-205ENST00000461489 SPANXA1Q9NS26 97 aa1.35□□□□□ -2.19
COL21A1-205ENST00000461489 NAT8BQ9UHF3 227 aa1.35□□□□□ -2.19
COL21A1-205ENST00000461489 LINC00588Q9Y4M8 146 aa1.35□□□□□ -2.19
COL21A1-205ENST00000461489 ZNF706Q9Y5V0 76 aaPredicted RBP1.35□□□□□ -2.19
COL21A1-205ENST00000461489 YLPM1P49750 1951 aaKnown RBP1.34□□□□□ -2.19
COL21A1-205ENST00000461489 TRAV9-1A0A075B6T8 112 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 IGKV1OR2-108A0A075B7D4 117 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 IGKV2-40A0A087WW87 121 aaPredicted RBP1.34□□□□□ -2.19
COL21A1-205ENST00000461489 A0A096LPF7 62 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 LOC107984640A0A0U1RRK4 108 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 A0A1B0GUT8 65 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 ZNF815PA8K554 130 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 F6UB75 175 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 M0R036 132 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 COX7A2LO14548 114 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 NDUFA1O15239 70 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 ARPC5O15511 151 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 CRXO43186 299 aaPredicted RBP1.34□□□□□ -2.19
COL21A1-205ENST00000461489 GATCO43716 136 aaKnown RBP1.34□□□□□ -2.19
COL21A1-205ENST00000461489 NUPR1O60356 82 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 SIX6O95475 246 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 LTAP01374 205 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 IGKV2D-40P01614 121 aaPredicted RBP1.34□□□□□ -2.19
COL21A1-205ENST00000461489 HLA-DQA1P01909 254 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 MT-ND4LP03901 98 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 MT-ND6P03923 174 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 TYMSP04818 313 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 ARMS2P0C7Q2 107 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 RAB4AP20338 218 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 CKS1BP61024 79 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 RPL37AP61513 92 aaKnown RBP1.34□□□□□ -2.19
COL21A1-205ENST00000461489 CNBPP62633 177 aaKnown RBP1.34□□□□□ -2.19
COL21A1-205ENST00000461489 HERVK_113P63121 156 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 HBBP68871 147 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 REG3AQ06141 175 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 CIRBPQ14011 172 aaKnown RBP1.34□□□□□ -2.19
COL21A1-205ENST00000461489 RHEBQ15382 184 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 IQCJQ1A5X6 159 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 CFAP126Q5VTH2 177 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 Q6ZTI0 123 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 Q86TA4 180 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 AKAP14Q86UN6 197 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 NIT1Q86X76 327 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 EXOC3-AS1Q8N2X6 119 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 SLC25A29Q8N8R3 303 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 FAM213BQ8TBF2 198 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 DIRC1Q969H9 104 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 FXYD5Q96DB9 178 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 FAM19A4Q96LR4 140 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 C20orf78Q9BR46 151 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 MIEN1Q9BRT3 115 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 GNB1LQ9BYB4 327 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 SMIM3Q9BZL3 60 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 MAP1LC3AQ9H492 121 aa1.34□□□□□ -2.19
COL21A1-205ENST00000461489 NXT2Q9NPJ8 142 aaKnown RBP1.34□□□□□ -2.19
COL21A1-205ENST00000461489 MRPL16Q9NX20 251 aaKnown RBP1.34□□□□□ -2.19
COL21A1-205ENST00000461489 CSDC2Q9Y534 153 aaKnown RBP1.34□□□□□ -2.19
COL21A1-205ENST00000461489 STAB2Q8WWQ8 2551 aa1.34□□□□□ -2.2
COL21A1-205ENST00000461489 CUBNO60494 3623 aa1.34□□□□□ -2.2
COL21A1-205ENST00000461489 PKD1L1Q8TDX9 2849 aa1.34□□□□□ -2.2
COL21A1-205ENST00000461489 TENM1Q9UKZ4 2725 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 TRAV8-2A0A0B4J237 113 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 IGKV2-24A0A0C4DH68 120 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 TRBV30A0A0K0K1B3 111 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 C19orf71A6NCJ1 209 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 H3BQ15 152 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 H3BVH4 76 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 M0R3E3 92 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 MRPS12O15235 138 aaKnown RBP1.33□□□□□ -2.2
COL21A1-205ENST00000461489 IGHV3-30P01768 117 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 IGHV3-33P01772 117 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 SFTA3P0C7M3 94 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 IGHV3-30-3P0DP02 117 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 IGHV3-30-5P0DP03 117 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 PYYP10082 97 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 ESDP10768 282 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 CKS2P33552 79 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 RPL35P42766 123 aaKnown RBP1.33□□□□□ -2.2
COL21A1-205ENST00000461489 RPL28P46779 137 aaKnown RBP1.33□□□□□ -2.2
COL21A1-205ENST00000461489 UBE2D3P61077 147 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 UBE2D2P62837 147 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 UBE2BP63146 152 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 KIAA0087Q14695 138 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 JOSD1Q15040 202 aaPredicted RBP1.33□□□□□ -2.2
COL21A1-205ENST00000461489 ESRGQ1W209 222 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 Q5BKY6 102 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 GDF5OSQ5U4N7 250 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 Q5VSD8 79 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 SPINK6Q6UWN8 80 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 TEX43Q6ZNM6 134 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 FAM231DQ6ZW35 169 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 ZNF767PQ75MW2 155 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 MIR17HGQ75NE6 70 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 ORMDL3Q8N138 153 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 FAM24BQ8N5W8 94 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 ZFAND2AQ8N6M9 145 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 C11orf72Q8NBR9 251 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 MBD3L1Q8WWY6 194 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 TVP23CQ96ET8 276 aa1.33□□□□□ -2.2
COL21A1-205ENST00000461489 CARD19Q96LW7 228 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms