RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 LINC00242Q5T6M2 205 aa10.5□□□□□ -0.73
NCL-207ENST00000461347 FAM110AQ9BQ89 295 aa10.49□□□□□ -0.73
NCL-207ENST00000461347 ESM1Q9NQ30 184 aa10.49□□□□□ -0.73
NCL-207ENST00000461347 BRI3O95415 125 aa10.49□□□□□ -0.73
NCL-207ENST00000461347 COX6A2Q02221 97 aa10.49□□□□□ -0.73
NCL-207ENST00000461347 A0A1B0GX51 115 aa10.48□□□□□ -0.73
NCL-207ENST00000461347 LINC00694P0DN24 101 aa10.48□□□□□ -0.73
NCL-207ENST00000461347 CITED2Q99967 270 aaPredicted RBP10.48□□□□□ -0.73
NCL-207ENST00000461347 DEFB113Q30KQ7 82 aa10.48□□□□□ -0.73
NCL-207ENST00000461347 C5orf47Q569G3 176 aa10.48□□□□□ -0.73
NCL-207ENST00000461347 UBL5Q9BZL1 73 aa10.48□□□□□ -0.73
NCL-207ENST00000461347 KLK5Q9Y337 293 aaPredicted RBP10.48□□□□□ -0.73
NCL-207ENST00000461347 HAMPP81172 84 aa10.48□□□□□ -0.73
NCL-207ENST00000461347 RBMY1FQ15415 496 aaKnown RBP10.47□□□□□ -0.73
NCL-207ENST00000461347 PRORYQ9H606 182 aa10.47□□□□□ -0.73
NCL-207ENST00000461347 F5H768 121 aa10.47□□□□□ -0.73
NCL-207ENST00000461347 TRACP01848 142 aa10.47□□□□□ -0.73
NCL-207ENST00000461347 SLPIP03973 132 aa10.46□□□□□ -0.73
NCL-207ENST00000461347 TRAV25A0A0B4J276 109 aa10.46□□□□□ -0.73
NCL-207ENST00000461347 LOC100131303A0A0U1RQF7 123 aa10.46□□□□□ -0.73
NCL-207ENST00000461347 SDIM1Q6ZPB5 146 aa10.46□□□□□ -0.74
NCL-207ENST00000461347 PKIGQ9Y2B9 76 aa10.46□□□□□ -0.74
NCL-207ENST00000461347 J3KT08 172 aa10.45□□□□□ -0.74
NCL-207ENST00000461347 IGHV4-31P0DP07 118 aa10.45□□□□□ -0.74
NCL-207ENST00000461347 FHL3Q13643 280 aa10.45□□□□□ -0.74
NCL-207ENST00000461347 WFDC10AQ9H1F0 79 aa10.45□□□□□ -0.74
NCL-207ENST00000461347 SMIM1B2RUZ4 78 aa10.45□□□□□ -0.74
NCL-207ENST00000461347 KLK9Q2XQG4 91 aa10.45□□□□□ -0.74
NCL-207ENST00000461347 TMEM126AQ9H061 195 aa10.45□□□□□ -0.74
NCL-207ENST00000461347 ATOX1O00244 68 aa10.44□□□□□ -0.74
NCL-207ENST00000461347 DAD1P61803 113 aa10.44□□□□□ -0.74
NCL-207ENST00000461347 LRBAP50851 2863 aa10.44□□□□□ -0.74
NCL-207ENST00000461347 ODF3L2Q3SX64 289 aa10.43□□□□□ -0.74
NCL-207ENST00000461347 DCHS1Q96JQ0 3298 aa10.42□□□□□ -0.74
NCL-207ENST00000461347 Q6Q795 121 aa10.42□□□□□ -0.74
NCL-207ENST00000461347 SBSPONQ8IVN8 264 aa10.42□□□□□ -0.74
NCL-207ENST00000461347 CDC42SE2Q9NRR3 84 aa10.42□□□□□ -0.74
NCL-207ENST00000461347 DEFB4AO15263 64 aa10.42□□□□□ -0.74
NCL-207ENST00000461347 NCR3O14931 201 aa10.41□□□□□ -0.74
NCL-207ENST00000461347 DNAJC9-AS1A6NH13 148 aa10.41□□□□□ -0.74
NCL-207ENST00000461347 ATMQ13315 3056 aa10.41□□□□□ -0.74
NCL-207ENST00000461347 FAM240AA0A1B0GVK7 77 aa10.4□□□□□ -0.74
NCL-207ENST00000461347 hADV29S1A0JD25 119 aa10.4□□□□□ -0.75
NCL-207ENST00000461347 GHRHP01286 108 aa10.39□□□□□ -0.75
NCL-207ENST00000461347 UQCRQO14949 82 aa10.39□□□□□ -0.75
NCL-207ENST00000461347 SMIM11BQ8TCY0 68 aa10.39□□□□□ -0.75
NCL-207ENST00000461347 TRBV6-8A0A0A6YYG3 113 aa10.39□□□□□ -0.75
NCL-207ENST00000461347 HRCT1Q6UXD1 115 aa10.39□□□□□ -0.75
NCL-207ENST00000461347 SMIM9A6NGZ8 99 aa10.38□□□□□ -0.75
NCL-207ENST00000461347 C1orf158Q8N1D5 194 aa10.38□□□□□ -0.75
NCL-207ENST00000461347 IBA57-AS1B1ANH7 110 aa10.37□□□□□ -0.75
NCL-207ENST00000461347 DSCR8Q96T75 97 aa10.37□□□□□ -0.75
NCL-207ENST00000461347 CCL18P55774 89 aa10.37□□□□□ -0.75
NCL-207ENST00000461347 Q8N2B8 174 aa10.37□□□□□ -0.75
NCL-207ENST00000461347 A0A0U1RQV1 116 aa10.36□□□□□ -0.75
NCL-207ENST00000461347 FAM19A5Q7Z5A7 132 aaPredicted RBP10.36□□□□□ -0.75
NCL-207ENST00000461347 IMUPQ9GZP8 106 aa10.36□□□□□ -0.75
NCL-207ENST00000461347 C3orf22Q8N5N4 141 aa10.36□□□□□ -0.75
NCL-207ENST00000461347 TRBV6-4A0A1B0GX49 114 aa10.36□□□□□ -0.75
NCL-207ENST00000461347 CSDC2Q9Y534 153 aaKnown RBP10.35□□□□□ -0.75
NCL-207ENST00000461347 ZNF561-AS1K7EIQ3 104 aa10.35□□□□□ -0.75
NCL-207ENST00000461347 BEAN1Q3B7T3 259 aa10.35□□□□□ -0.75
NCL-207ENST00000461347 FAM222AQ5U5X8 452 aa10.35□□□□□ -0.75
NCL-207ENST00000461347 JMJD7-PLA2G4BH0Y9G9 81 aa10.35□□□□□ -0.75
NCL-207ENST00000461347 LINC00269Q8N2A0 174 aa10.34□□□□□ -0.75
NCL-207ENST00000461347 MRAPQ8TCY5 172 aa10.34□□□□□ -0.75
NCL-207ENST00000461347 PRO0255Q9UI72 69 aa10.34□□□□□ -0.75
NCL-207ENST00000461347 TRAV23DV6A0A075B6W5 121 aa10.34□□□□□ -0.75
NCL-207ENST00000461347 DEFB135Q30KP9 77 aa10.34□□□□□ -0.75
NCL-207ENST00000461347 C11orf72Q8NBR9 251 aa10.34□□□□□ -0.75
NCL-207ENST00000461347 WFDC11Q8NEX6 87 aa10.34□□□□□ -0.75
NCL-207ENST00000461347 LITAFQ99732 161 aa10.34□□□□□ -0.75
NCL-207ENST00000461347 IGLV4-60A0A075B6I1 120 aa10.33□□□□□ -0.76
NCL-207ENST00000461347 EIF4EBP3O60516 100 aaPredicted RBP10.33□□□□□ -0.76
NCL-207ENST00000461347 ZZEF1O43149 2961 aa10.33□□□□□ -0.76
NCL-207ENST00000461347 KRTAP10-9P60411 292 aa10.32□□□□□ -0.76
NCL-207ENST00000461347 LAMA5O15230 3695 aa10.32□□□□□ -0.76
NCL-207ENST00000461347 SPAG11BQ08648 103 aa10.32□□□□□ -0.76
NCL-207ENST00000461347 TMEM256-PLSCR3K7ERE1 68 aa10.32□□□□□ -0.76
NCL-207ENST00000461347 SOSTDC1Q6X4U4 206 aa10.32□□□□□ -0.76
NCL-207ENST00000461347 A0A087WYN8 130 aa10.31□□□□□ -0.76
NCL-207ENST00000461347 IGLV5-39A0A0G2JS06 123 aa10.31□□□□□ -0.76
NCL-207ENST00000461347 LINC00959A0A1B0GUT2 108 aa10.31□□□□□ -0.76
NCL-207ENST00000461347 RPL28P46779 137 aaKnown RBP10.3□□□□□ -0.76
NCL-207ENST00000461347 RPL18AQ02543 176 aaKnown RBP10.3□□□□□ -0.76
NCL-207ENST00000461347 NTM-AS1Q6ZSK4 140 aa10.3□□□□□ -0.76
NCL-207ENST00000461347 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.3□□□□□ -0.76
NCL-207ENST00000461347 KLK12Q9UKR0 248 aa10.3□□□□□ -0.76
NCL-207ENST00000461347 PLA2G2AP14555 144 aa10.3□□□□□ -0.76
NCL-207ENST00000461347 C6orf99Q4VX62 202 aa10.3□□□□□ -0.76
NCL-207ENST00000461347 LINC00337Q8N6G1 96 aa10.3□□□□□ -0.76
NCL-207ENST00000461347 RBM3P98179 157 aaKnown RBP10.29□□□□□ -0.76
NCL-207ENST00000461347 A0A087WVE0 104 aa10.29□□□□□ -0.76
NCL-207ENST00000461347 CHCHD10Q8WYQ3 142 aaPredicted RBP10.29□□□□□ -0.76
NCL-207ENST00000461347 LINC00526Q96FQ7 95 aa10.29□□□□□ -0.76
NCL-207ENST00000461347 LRRC75A-AS1Q8N1F1 130 aa10.28□□□□□ -0.76
NCL-207ENST00000461347 BBC3Q96PG8 261 aaPredicted RBP10.28□□□□□ -0.76
NCL-207ENST00000461347 APOC4P55056 127 aa10.28□□□□□ -0.76
NCL-207ENST00000461347 COX7CP15954 63 aa10.28□□□□□ -0.76
NCL-207ENST00000461347 USP17L23D6RBM5 183 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms