RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 TENM1Q9UKZ4 2725 aa1.11□□□□□ -2.23
SPTLC1-203ENST00000461132 ABCC3O15438 1527 aa1.11□□□□□ -2.23
SPTLC1-203ENST00000461132 EPRSP07814 1512 aaKnown RBP1.11□□□□□ -2.23
SPTLC1-203ENST00000461132 A0A0D9SFI3 127 aa1.11□□□□□ -2.23
SPTLC1-203ENST00000461132 FDCSPQ8NFU4 85 aa1.11□□□□□ -2.23
SPTLC1-203ENST00000461132 SPRR4Q96PI1 79 aa1.11□□□□□ -2.23
SPTLC1-203ENST00000461132 C10orf95Q9H7T3 257 aa1.11□□□□□ -2.23
SPTLC1-203ENST00000461132 UACAQ9BZF9 1416 aa1.11□□□□□ -2.23
SPTLC1-203ENST00000461132 UNC13BO14795 1591 aa1.11□□□□□ -2.23
SPTLC1-203ENST00000461132 KIAA1551Q9HCM1 1747 aa1.11□□□□□ -2.23
SPTLC1-203ENST00000461132 ATP10BO94823 1461 aa1.11□□□□□ -2.23
SPTLC1-203ENST00000461132 SBF2Q86WG5 1849 aa1.1□□□□□ -2.23
SPTLC1-203ENST00000461132 SSC5DA1L4H1 1573 aa1.1□□□□□ -2.23
SPTLC1-203ENST00000461132 EDC4Q6P2E9 1401 aaKnown RBP1.1□□□□□ -2.23
SPTLC1-203ENST00000461132 H3BQF6 201 aa1.1□□□□□ -2.23
SPTLC1-203ENST00000461132 S100A13Q99584 98 aa1.1□□□□□ -2.23
SPTLC1-203ENST00000461132 FANCAO15360 1455 aa1.1□□□□□ -2.23
SPTLC1-203ENST00000461132 HELZ2Q9BYK8 2649 aaKnown RBP1.09□□□□□ -2.23
SPTLC1-203ENST00000461132 ARMS2P0C7Q2 107 aa1.09□□□□□ -2.23
SPTLC1-203ENST00000461132 LINC00472Q9H8W2 130 aa1.09□□□□□ -2.23
SPTLC1-203ENST00000461132 CLTCQ00610 1675 aaKnown RBP1.09□□□□□ -2.24
SPTLC1-203ENST00000461132 PDCD11Q14690 1871 aaKnown RBP1.09□□□□□ -2.24
SPTLC1-203ENST00000461132 MYO7AQ13402 2215 aa1.08□□□□□ -2.24
SPTLC1-203ENST00000461132 KMT2BQ9UMN6 2715 aaPredicted RBP1.08□□□□□ -2.24
SPTLC1-203ENST00000461132 IQSEC2Q5JU85 1478 aa1.08□□□□□ -2.24
SPTLC1-203ENST00000461132 A0A0D9SG42 100 aa1.08□□□□□ -2.24
SPTLC1-203ENST00000461132 TRBV6-1A0A0K0K1D8 114 aa1.08□□□□□ -2.24
SPTLC1-203ENST00000461132 D6R8Y8 96 aa1.08□□□□□ -2.24
SPTLC1-203ENST00000461132 LEPROTL1O95214 131 aa1.08□□□□□ -2.24
SPTLC1-203ENST00000461132 COX6A2Q02221 97 aa1.08□□□□□ -2.24
SPTLC1-203ENST00000461132 SSBP3-AS1Q7Z2R9 100 aa1.08□□□□□ -2.24
SPTLC1-203ENST00000461132 MUSTN1Q8IVN3 82 aa1.08□□□□□ -2.24
SPTLC1-203ENST00000461132 KANTRA0A1W2PQU2 76 aa1.07□□□□□ -2.24
SPTLC1-203ENST00000461132 C10orf142B7Z368 130 aa1.07□□□□□ -2.24
SPTLC1-203ENST00000461132 SPINK7P58062 85 aa1.07□□□□□ -2.24
SPTLC1-203ENST00000461132 SNRPFP62306 86 aaKnown RBP1.07□□□□□ -2.24
SPTLC1-203ENST00000461132 C10orf113Q5VZT2 155 aa1.07□□□□□ -2.24
SPTLC1-203ENST00000461132 HIGD1BQ9P298 99 aa1.07□□□□□ -2.24
SPTLC1-203ENST00000461132 SPCS1Q9Y6A9 102 aa1.07□□□□□ -2.24
SPTLC1-203ENST00000461132 ZNF236Q9UL36 1845 aa1.07□□□□□ -2.24
SPTLC1-203ENST00000461132 ARHGEF5Q12774 1597 aa1.07□□□□□ -2.24
SPTLC1-203ENST00000461132 CADP27708 2225 aa1.07□□□□□ -2.24
SPTLC1-203ENST00000461132 CEP162Q5TB80 1403 aa1.06□□□□□ -2.24
SPTLC1-203ENST00000461132 A0A087WVE0 104 aa1.06□□□□□ -2.24
SPTLC1-203ENST00000461132 F8WEM9 126 aa1.06□□□□□ -2.24
SPTLC1-203ENST00000461132 HMGN2P05204 90 aaKnown RBP1.06□□□□□ -2.24
SPTLC1-203ENST00000461132 ACYP1P07311 99 aa1.06□□□□□ -2.24
SPTLC1-203ENST00000461132 GNGT1P63211 74 aa1.06□□□□□ -2.24
SPTLC1-203ENST00000461132 ADIRFQ15847 76 aa1.06□□□□□ -2.24
SPTLC1-203ENST00000461132 MED14O60244 1454 aa1.05□□□□□ -2.24
SPTLC1-203ENST00000461132 ERCC6L2Q5T890 1561 aa1.05□□□□□ -2.24
SPTLC1-203ENST00000461132 COL4A6Q14031 1691 aa1.05□□□□□ -2.24
SPTLC1-203ENST00000461132 NAV3Q8IVL0 2385 aa1.05□□□□□ -2.24
SPTLC1-203ENST00000461132 RGPD4Q7Z3J3 1758 aa1.04□□□□□ -2.24
SPTLC1-203ENST00000461132 WNK3Q9BYP7 1800 aa1.04□□□□□ -2.24
SPTLC1-203ENST00000461132 H0Y9P7 68 aa1.04□□□□□ -2.24
SPTLC1-203ENST00000461132 LINC01600Q96MT4 127 aa1.04□□□□□ -2.24
SPTLC1-203ENST00000461132 CNFNQ9BYD5 112 aa1.04□□□□□ -2.24
SPTLC1-203ENST00000461132 PSENENQ9NZ42 101 aa1.04□□□□□ -2.24
SPTLC1-203ENST00000461132 POLA1P09884 1462 aaPredicted RBP1.04□□□□□ -2.24
SPTLC1-203ENST00000461132 NRXN1Q9ULB1 1477 aa1.04□□□□□ -2.24
SPTLC1-203ENST00000461132 BTAF1O14981 1849 aa1.03□□□□□ -2.24
SPTLC1-203ENST00000461132 LINC00643Q86TS7 51 aa1.03□□□□□ -2.24
SPTLC1-203ENST00000461132 DEFB107AQ8IZN7 70 aa1.03□□□□□ -2.24
SPTLC1-203ENST00000461132 FAM103A1Q9BTL3 118 aaKnown RBP1.03□□□□□ -2.24
SPTLC1-203ENST00000461132 MON2Q7Z3U7 1717 aa1.03□□□□□ -2.24
SPTLC1-203ENST00000461132 C1orf167Q5SNV9 1468 aa1.02□□□□□ -2.25
SPTLC1-203ENST00000461132 MYO7BQ6PIF6 2116 aa1.02□□□□□ -2.25
SPTLC1-203ENST00000461132 SPATA8Q6RVD6 105 aa1.02□□□□□ -2.25
SPTLC1-203ENST00000461132 KDM3BQ7LBC6 1761 aa1.02□□□□□ -2.25
SPTLC1-203ENST00000461132 ST20Q9HBF5 79 aa1.02□□□□□ -2.25
SPTLC1-203ENST00000461132 SCN7AQ01118 1682 aa1.01□□□□□ -2.25
SPTLC1-203ENST00000461132 NLRP1Q9C000 1473 aa1.01□□□□□ -2.25
SPTLC1-203ENST00000461132 PLGLAQ15195 96 aa1.01□□□□□ -2.25
SPTLC1-203ENST00000461132 PIGYQ3MUY2 71 aa1.01□□□□□ -2.25
SPTLC1-203ENST00000461132 NMSQ5H8A3 153 aa1.01□□□□□ -2.25
SPTLC1-203ENST00000461132 RGPD3A6NKT7 1758 aaPredicted RBP1.01□□□□□ -2.25
SPTLC1-203ENST00000461132 LRP6O75581 1613 aa1□□□□□ -2.25
SPTLC1-203ENST00000461132 ARHGAP35Q9NRY4 1499 aa1□□□□□ -2.25
SPTLC1-203ENST00000461132 TRBV7-4A0A0J9YYF1 115 aa1□□□□□ -2.25
SPTLC1-203ENST00000461132 A0A1B0GU69 56 aa1□□□□□ -2.25
SPTLC1-203ENST00000461132 TDRG1Q3Y452 100 aa1□□□□□ -2.25
SPTLC1-203ENST00000461132 C6orf201Q7Z4U5 140 aa1□□□□□ -2.25
SPTLC1-203ENST00000461132 TP53AIP1Q9HCN2 124 aa1□□□□□ -2.25
SPTLC1-203ENST00000461132 NUP188Q5SRE5 1749 aa1□□□□□ -2.25
SPTLC1-203ENST00000461132 ASXL3Q9C0F0 2248 aa1□□□□□ -2.25
SPTLC1-203ENST00000461132 CUX1P39880 1505 aa0.99□□□□□ -2.25
SPTLC1-203ENST00000461132 PLXNB2O15031 1838 aa0.99□□□□□ -2.25
SPTLC1-203ENST00000461132 MYMXA0A1B0GTQ4 84 aa0.99□□□□□ -2.25
SPTLC1-203ENST00000461132 MYO3AQ8NEV4 1616 aa0.99□□□□□ -2.25
SPTLC1-203ENST00000461132 MYH4Q9Y623 1939 aa0.99□□□□□ -2.25
SPTLC1-203ENST00000461132 PPLO60437 1756 aa0.98□□□□□ -2.25
SPTLC1-203ENST00000461132 SUPT6HQ7KZ85 1726 aaKnown RBP0.98□□□□□ -2.25
SPTLC1-203ENST00000461132 IQCF6A8MYZ5 107 aa0.98□□□□□ -2.25
SPTLC1-203ENST00000461132 WFDC2Q14508 124 aa0.98□□□□□ -2.25
SPTLC1-203ENST00000461132 PRO0255Q9UI72 69 aa0.98□□□□□ -2.25
SPTLC1-203ENST00000461132 JMJD1CQ15652 2540 aa0.98□□□□□ -2.25
SPTLC1-203ENST00000461132 MAGI2Q86UL8 1455 aa0.98□□□□□ -2.25
SPTLC1-203ENST00000461132 AHCTF1Q8WYP5 2266 aa0.98□□□□□ -2.25
SPTLC1-203ENST00000461132 CACNA1CQ13936 2221 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms