RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 C5orf38Q86SI9 138 aa13.29□□□□□ -0.28
RPUSD3-210ENST00000460909 UBE2D1P51668 147 aa13.28□□□□□ -0.28
RPUSD3-210ENST00000460909 LINC00242Q5T6M2 205 aa13.28□□□□□ -0.28
RPUSD3-210ENST00000460909 Q6ZN92 141 aa13.28□□□□□ -0.28
RPUSD3-210ENST00000460909 VCX2Q9H322 139 aa13.28□□□□□ -0.28
RPUSD3-210ENST00000460909 SDIM1Q6ZPB5 146 aa13.27□□□□□ -0.29
RPUSD3-210ENST00000460909 LINC00526Q96FQ7 95 aa13.27□□□□□ -0.29
RPUSD3-210ENST00000460909 A0A096LNJ9 63 aa13.26□□□□□ -0.29
RPUSD3-210ENST00000460909 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.26□□□□□ -0.29
RPUSD3-210ENST00000460909 LINC01549A6NIU2 74 aa13.26□□□□□ -0.29
RPUSD3-210ENST00000460909 LINC00614P0C842 121 aa13.26□□□□□ -0.29
RPUSD3-210ENST00000460909 MALP21145 153 aa13.26□□□□□ -0.29
RPUSD3-210ENST00000460909 COX6A2Q02221 97 aa13.26□□□□□ -0.29
RPUSD3-210ENST00000460909 Q8N1X5 172 aa13.26□□□□□ -0.29
RPUSD3-210ENST00000460909 SCGB3A1Q96QR1 104 aa13.26□□□□□ -0.29
RPUSD3-210ENST00000460909 COLCA2A8K830 154 aa13.25□□□□□ -0.29
RPUSD3-210ENST00000460909 FAM19A3Q7Z5A8 133 aa13.25□□□□□ -0.29
RPUSD3-210ENST00000460909 C2orf88Q9BSF0 95 aa13.25□□□□□ -0.29
RPUSD3-210ENST00000460909 PAPPA-AS1Q5QFB9 102 aa13.24□□□□□ -0.29
RPUSD3-210ENST00000460909 KRTAP4-5Q9BYR2 181 aa13.24□□□□□ -0.29
RPUSD3-210ENST00000460909 IGHV3-64A0A075B6Q5 118 aa13.22□□□□□ -0.29
RPUSD3-210ENST00000460909 A0A087WZ39 114 aa13.22□□□□□ -0.29
RPUSD3-210ENST00000460909 ZNF561-AS1K7EIQ3 104 aa13.22□□□□□ -0.29
RPUSD3-210ENST00000460909 TRGC2P03986 189 aa13.22□□□□□ -0.29
RPUSD3-210ENST00000460909 SCXQ7RTU7 201 aa13.22□□□□□ -0.29
RPUSD3-210ENST00000460909 CHAC1Q9BUX1 264 aa13.22□□□□□ -0.29
RPUSD3-210ENST00000460909 IGLV4-69A0A075B6H9 119 aa13.21□□□□□ -0.29
RPUSD3-210ENST00000460909 PANO1I0J062 215 aa13.21□□□□□ -0.29
RPUSD3-210ENST00000460909 APOMO95445 188 aa13.21□□□□□ -0.29
RPUSD3-210ENST00000460909 RAB5BP61020 215 aa13.21□□□□□ -0.29
RPUSD3-210ENST00000460909 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.21□□□□□ -0.29
RPUSD3-210ENST00000460909 SCO1O75880 301 aa13.2□□□□□ -0.3
RPUSD3-210ENST00000460909 SMR3BP02814 79 aaPredicted RBP13.2□□□□□ -0.3
RPUSD3-210ENST00000460909 OR10D4PQ8NGN7 298 aa13.2□□□□□ -0.3
RPUSD3-210ENST00000460909 PMCHL1Q16048 86 aa13.19□□□□□ -0.3
RPUSD3-210ENST00000460909 CIRBP-AS1Q8TBR5 109 aa13.19□□□□□ -0.3
RPUSD3-210ENST00000460909 HBDP02042 147 aa13.18□□□□□ -0.3
RPUSD3-210ENST00000460909 SPAG11BQ08648 103 aa13.18□□□□□ -0.3
RPUSD3-210ENST00000460909 SYCNQ0VAF6 134 aa13.18□□□□□ -0.3
RPUSD3-210ENST00000460909 CIRBPQ14011 172 aaKnown RBP13.18□□□□□ -0.3
RPUSD3-210ENST00000460909 PDZD11Q5EBL8 140 aa13.18□□□□□ -0.3
RPUSD3-210ENST00000460909 ORAOV1Q8WV07 137 aa13.18□□□□□ -0.3
RPUSD3-210ENST00000460909 C2orf48Q96LS8 159 aa13.18□□□□□ -0.3
RPUSD3-210ENST00000460909 CARD19Q96LW7 228 aa13.18□□□□□ -0.3
RPUSD3-210ENST00000460909 CST9LQ9H4G1 147 aa13.18□□□□□ -0.3
RPUSD3-210ENST00000460909 LINC01561Q8N1V8 128 aa13.17□□□□□ -0.3
RPUSD3-210ENST00000460909 CHCHD1Q96BP2 118 aaKnown RBP13.17□□□□□ -0.3
RPUSD3-210ENST00000460909 A0A0J9YXV3 536 aa13.16□□□□□ -0.3
RPUSD3-210ENST00000460909 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.16□□□□□ -0.3
RPUSD3-210ENST00000460909 Q6ZRU5 148 aa13.16□□□□□ -0.3
RPUSD3-210ENST00000460909 HERVK_113P63121 156 aa13.15□□□□□ -0.3
RPUSD3-210ENST00000460909 SEC11AP67812 179 aa13.15□□□□□ -0.3
RPUSD3-210ENST00000460909 KIAA0087Q14695 138 aa13.15□□□□□ -0.3
RPUSD3-210ENST00000460909 PMVKQ15126 192 aa13.15□□□□□ -0.3
RPUSD3-210ENST00000460909 CHTF8P0CG12 524 aa13.14□□□□□ -0.31
RPUSD3-210ENST00000460909 CAMK2N2Q96S95 79 aa13.14□□□□□ -0.31
RPUSD3-210ENST00000460909 CDKN2A-AS1Q9UH64 79 aa13.14□□□□□ -0.31
RPUSD3-210ENST00000460909 TINCRA0A1B0GVN0 87 aa13.13□□□□□ -0.31
RPUSD3-210ENST00000460909 EPM2AB3EWF7 344 aa13.12□□□□□ -0.31
RPUSD3-210ENST00000460909 F8WDY8 70 aa13.12□□□□□ -0.31
RPUSD3-210ENST00000460909 Q5VSD8 79 aa13.12□□□□□ -0.31
RPUSD3-210ENST00000460909 SPACA4Q8TDM5 124 aa13.12□□□□□ -0.31
RPUSD3-210ENST00000460909 GEMIN7Q9H840 131 aaKnown RBP13.12□□□□□ -0.31
RPUSD3-210ENST00000460909 IGLV5-45A0A087WSX0 123 aa13.11□□□□□ -0.31
RPUSD3-210ENST00000460909 LINC00310P59036 64 aa13.11□□□□□ -0.31
RPUSD3-210ENST00000460909 BAGE3Q86Y29 109 aa13.11□□□□□ -0.31
RPUSD3-210ENST00000460909 ABCA13Q86UQ4 5058 aa13.11□□□□□ -0.31
RPUSD3-210ENST00000460909 SRRM2Q9UQ35 2752 aaKnown RBP13.1□□□□□ -0.31
RPUSD3-210ENST00000460909 VPS13BQ7Z7G8 4022 aa13.1□□□□□ -0.31
RPUSD3-210ENST00000460909 A0A096LNI7 61 aa13.1□□□□□ -0.31
RPUSD3-210ENST00000460909 ATP5LO75964 103 aa13.1□□□□□ -0.31
RPUSD3-210ENST00000460909 C10orf25Q5T742 122 aa13.1□□□□□ -0.31
RPUSD3-210ENST00000460909 RNF151Q2KHN1 245 aa13.09□□□□□ -0.31
RPUSD3-210ENST00000460909 MRPL35Q9NZE8 188 aaKnown RBP13.09□□□□□ -0.31
RPUSD3-210ENST00000460909 A0A087WYN8 130 aa13.08□□□□□ -0.32
RPUSD3-210ENST00000460909 UNQ6190/PRO20217Q6UXQ8 127 aa13.08□□□□□ -0.32
RPUSD3-210ENST00000460909 LINC00528Q8N1L1 170 aa13.08□□□□□ -0.32
RPUSD3-210ENST00000460909 LINC00469Q8N7U9 141 aa13.08□□□□□ -0.32
RPUSD3-210ENST00000460909 IGKV2-24A0A0C4DH68 120 aa13.07□□□□□ -0.32
RPUSD3-210ENST00000460909 FAM229AH3BQW9 127 aa13.07□□□□□ -0.32
RPUSD3-210ENST00000460909 NDUFA1O15239 70 aa13.07□□□□□ -0.32
RPUSD3-210ENST00000460909 HSBP1O75506 76 aa13.07□□□□□ -0.32
RPUSD3-210ENST00000460909 SERF1AO75920 110 aa13.07□□□□□ -0.32
RPUSD3-210ENST00000460909 IGLC3P0DOY3 106 aa13.07□□□□□ -0.32
RPUSD3-210ENST00000460909 FAM19A2Q8N3H0 131 aa13.07□□□□□ -0.32
RPUSD3-210ENST00000460909 PKIGQ9Y2B9 76 aa13.07□□□□□ -0.32
RPUSD3-210ENST00000460909 PCLOQ9Y6V0 5065 aa13.07□□□□□ -0.32
RPUSD3-210ENST00000460909 LOC107984640A0A0U1RRK4 108 aa13.06□□□□□ -0.32
RPUSD3-210ENST00000460909 NDUFA6P56556 154 aa13.06□□□□□ -0.32
RPUSD3-210ENST00000460909 SMIM1B2RUZ4 78 aa13.05□□□□□ -0.32
RPUSD3-210ENST00000460909 NUPR1O60356 82 aa13.05□□□□□ -0.32
RPUSD3-210ENST00000460909 C2orf82Q6UX34 121 aa13.05□□□□□ -0.32
RPUSD3-210ENST00000460909 Q8IZM0 81 aa13.05□□□□□ -0.32
RPUSD3-210ENST00000460909 PLAC8Q9NZF1 115 aa13.05□□□□□ -0.32
RPUSD3-210ENST00000460909 C6orf48Q9UBA6 75 aa13.05□□□□□ -0.32
RPUSD3-210ENST00000460909 PTTG1IPP53801 180 aa13.04□□□□□ -0.32
RPUSD3-210ENST00000460909 MAJINQ3KP22 176 aa13.04□□□□□ -0.32
RPUSD3-210ENST00000460909 DPH3Q96FX2 82 aa13.04□□□□□ -0.32
RPUSD3-210ENST00000460909 PACRGQ96M98 296 aaPredicted RBP13.04□□□□□ -0.32
RPUSD3-210ENST00000460909 IFI27L1Q96BM0 104 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms