RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 LINC01549A6NIU2 74 aa9.11□□□□□ -0.95
HDLBP-229ENST00000460826 GCSHP23434 173 aa9.11□□□□□ -0.95
HDLBP-229ENST00000460826 COX6A2Q02221 97 aa9.11□□□□□ -0.95
HDLBP-229ENST00000460826 LINC01620Q4KN68 170 aa9.11□□□□□ -0.95
HDLBP-229ENST00000460826 PDZD11Q5EBL8 140 aa9.11□□□□□ -0.95
HDLBP-229ENST00000460826 CHCHD1Q96BP2 118 aaKnown RBP9.11□□□□□ -0.95
HDLBP-229ENST00000460826 IGHV3OR16-9A0A0B4J2B5 98 aa9.1□□□□□ -0.95
HDLBP-229ENST00000460826 COX7A2LO14548 114 aa9.1□□□□□ -0.95
HDLBP-229ENST00000460826 SLPIP03973 132 aa9.1□□□□□ -0.95
HDLBP-229ENST00000460826 CFAP161Q6P656 301 aa9.1□□□□□ -0.95
HDLBP-229ENST00000460826 C2orf88Q9BSF0 95 aa9.1□□□□□ -0.95
HDLBP-229ENST00000460826 HSPG2P98160 4391 aa9.09□□□□□ -0.95
HDLBP-229ENST00000460826 GVQW2A0A096LPI5 108 aaPredicted RBP9.09□□□□□ -0.95
HDLBP-229ENST00000460826 IGHV1-58A0A0C4DH39 117 aa9.09□□□□□ -0.95
HDLBP-229ENST00000460826 NUPR1O60356 82 aa9.09□□□□□ -0.95
HDLBP-229ENST00000460826 SERF1AO75920 110 aa9.09□□□□□ -0.95
HDLBP-229ENST00000460826 PAPPA-AS1Q5QFB9 102 aa9.09□□□□□ -0.95
HDLBP-229ENST00000460826 LINC00526Q96FQ7 95 aa9.09□□□□□ -0.95
HDLBP-229ENST00000460826 HERC2O95714 4834 aa9.08□□□□□ -0.96
HDLBP-229ENST00000460826 A0A0J9YXV3 536 aa9.08□□□□□ -0.96
HDLBP-229ENST00000460826 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.08□□□□□ -0.96
HDLBP-229ENST00000460826 FAM19A3Q7Z5A8 133 aa9.08□□□□□ -0.96
HDLBP-229ENST00000460826 FAM19A2Q8N3H0 131 aa9.08□□□□□ -0.96
HDLBP-229ENST00000460826 HIST1H2BKO60814 126 aa9.07□□□□□ -0.96
HDLBP-229ENST00000460826 HIST1H2BJP06899 126 aa9.07□□□□□ -0.96
HDLBP-229ENST00000460826 MALP21145 153 aa9.07□□□□□ -0.96
HDLBP-229ENST00000460826 HIST1H2BOP23527 126 aa9.07□□□□□ -0.96
HDLBP-229ENST00000460826 HIST1H2BBP33778 126 aa9.07□□□□□ -0.96
HDLBP-229ENST00000460826 HIST1H2BDP58876 126 aa9.07□□□□□ -0.96
HDLBP-229ENST00000460826 HIST1H2BCP62807 126 aa9.07□□□□□ -0.96
HDLBP-229ENST00000460826 HIST2H2BEQ16778 126 aa9.07□□□□□ -0.96
HDLBP-229ENST00000460826 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.07□□□□□ -0.96
HDLBP-229ENST00000460826 HIST1H2BHQ93079 126 aa9.07□□□□□ -0.96
HDLBP-229ENST00000460826 HIST1H2BNQ99877 126 aa9.07□□□□□ -0.96
HDLBP-229ENST00000460826 HIST1H2BMQ99879 126 aa9.07□□□□□ -0.96
HDLBP-229ENST00000460826 CST9LQ9H4G1 147 aa9.07□□□□□ -0.96
HDLBP-229ENST00000460826 HSBP1O75506 76 aa9.06□□□□□ -0.96
HDLBP-229ENST00000460826 CNBPP62633 177 aaKnown RBP9.06□□□□□ -0.96
HDLBP-229ENST00000460826 PMVKQ15126 192 aa9.06□□□□□ -0.96
HDLBP-229ENST00000460826 A0A087WZ39 114 aa9.05□□□□□ -0.96
HDLBP-229ENST00000460826 C9orf163Q8N9P6 203 aa9.05□□□□□ -0.96
HDLBP-229ENST00000460826 IGHV3-64A0A075B6Q5 118 aa9.04□□□□□ -0.96
HDLBP-229ENST00000460826 ATP5LO75964 103 aa9.04□□□□□ -0.96
HDLBP-229ENST00000460826 FAM30AQ9NZY2 134 aa9.04□□□□□ -0.96
HDLBP-229ENST00000460826 IGLV4-69A0A075B6H9 119 aa9.03□□□□□ -0.96
HDLBP-229ENST00000460826 ZNF561-AS1K7EIQ3 104 aa9.03□□□□□ -0.96
HDLBP-229ENST00000460826 APOMO95445 188 aa9.03□□□□□ -0.96
HDLBP-229ENST00000460826 NDUFA6P56556 154 aa9.03□□□□□ -0.96
HDLBP-229ENST00000460826 HERVK_113P63121 156 aa9.03□□□□□ -0.96
HDLBP-229ENST00000460826 SPAG11BQ08648 103 aa9.03□□□□□ -0.96
HDLBP-229ENST00000460826 ORAOV1Q8WV07 137 aa9.03□□□□□ -0.96
HDLBP-229ENST00000460826 CDKN2A-AS1Q9UH64 79 aa9.03□□□□□ -0.96
HDLBP-229ENST00000460826 TINCRA0A1B0GVN0 87 aa9.02□□□□□ -0.97
HDLBP-229ENST00000460826 SEC11AP67812 179 aa9.02□□□□□ -0.97
HDLBP-229ENST00000460826 HAMPP81172 84 aa9.02□□□□□ -0.97
HDLBP-229ENST00000460826 OR10D4PQ8NGN7 298 aa9.02□□□□□ -0.97
HDLBP-229ENST00000460826 IFI27L1Q96BM0 104 aa9.02□□□□□ -0.97
HDLBP-229ENST00000460826 GEMIN7Q9H840 131 aaKnown RBP9.02□□□□□ -0.97
HDLBP-229ENST00000460826 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.01□□□□□ -0.97
HDLBP-229ENST00000460826 CDK2AP2O75956 126 aa9.01□□□□□ -0.97
HDLBP-229ENST00000460826 XGP55808 180 aa9.01□□□□□ -0.97
HDLBP-229ENST00000460826 Q6ZSA8 131 aa9.01□□□□□ -0.97
HDLBP-229ENST00000460826 LINC01561Q8N1V8 128 aa9.01□□□□□ -0.97
HDLBP-229ENST00000460826 LINC00469Q8N7U9 141 aa9.01□□□□□ -0.97
HDLBP-229ENST00000460826 IGLV5-45A0A087WSX0 123 aa9□□□□□ -0.97
HDLBP-229ENST00000460826 IGLC3P0DOY3 106 aa9□□□□□ -0.97
HDLBP-229ENST00000460826 SYCNQ0VAF6 134 aa9□□□□□ -0.97
HDLBP-229ENST00000460826 KIAA0087Q14695 138 aa9□□□□□ -0.97
HDLBP-229ENST00000460826 SDIM1Q6ZPB5 146 aa9□□□□□ -0.97
HDLBP-229ENST00000460826 Q6ZRU5 148 aa9□□□□□ -0.97
HDLBP-229ENST00000460826 LEPROTL1O95214 131 aa8.99□□□□□ -0.97
HDLBP-229ENST00000460826 FABP4P15090 132 aa8.99□□□□□ -0.97
HDLBP-229ENST00000460826 C2orf48Q96LS8 159 aa8.99□□□□□ -0.97
HDLBP-229ENST00000460826 CARD19Q96LW7 228 aa8.99□□□□□ -0.97
HDLBP-229ENST00000460826 CAMK2N2Q96S95 79 aa8.99□□□□□ -0.97
HDLBP-229ENST00000460826 CHAC1Q9BUX1 264 aa8.99□□□□□ -0.97
HDLBP-229ENST00000460826 KRTAP17-1Q9BYP8 105 aa8.99□□□□□ -0.97
HDLBP-229ENST00000460826 FAT1Q14517 4588 aa8.99□□□□□ -0.97
HDLBP-229ENST00000460826 SMIM1B2RUZ4 78 aa8.98□□□□□ -0.97
HDLBP-229ENST00000460826 PANO1I0J062 215 aa8.98□□□□□ -0.97
HDLBP-229ENST00000460826 CHTOPQ9Y3Y2 248 aaKnown RBP8.98□□□□□ -0.97
HDLBP-229ENST00000460826 TRAV12-1A0A0B4J245 112 aa8.97□□□□□ -0.97
HDLBP-229ENST00000460826 C11orf86A6NJI1 115 aa8.97□□□□□ -0.97
HDLBP-229ENST00000460826 ZNF22P17026 224 aaPredicted RBP8.97□□□□□ -0.97
HDLBP-229ENST00000460826 COA6Q5JTJ3 125 aaKnown RBP8.97□□□□□ -0.97
HDLBP-229ENST00000460826 C10orf25Q5T742 122 aa8.97□□□□□ -0.97
HDLBP-229ENST00000460826 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.97□□□□□ -0.97
HDLBP-229ENST00000460826 H0Y8G0 127 aa8.96□□□□□ -0.98
HDLBP-229ENST00000460826 SPINK8P0C7L1 97 aa8.96□□□□□ -0.98
HDLBP-229ENST00000460826 CHTF8P0CG12 524 aa8.96□□□□□ -0.98
HDLBP-229ENST00000460826 C2orf82Q6UX34 121 aa8.96□□□□□ -0.98
HDLBP-229ENST00000460826 UNQ6190/PRO20217Q6UXQ8 127 aa8.96□□□□□ -0.98
HDLBP-229ENST00000460826 PACRGQ96M98 296 aaPredicted RBP8.96□□□□□ -0.98
HDLBP-229ENST00000460826 MRPL35Q9NZE8 188 aaKnown RBP8.96□□□□□ -0.98
HDLBP-229ENST00000460826 TOMM7Q9P0U1 55 aa8.96□□□□□ -0.98
HDLBP-229ENST00000460826 HSPB8Q9UJY1 196 aa8.95□□□□□ -0.98
HDLBP-229ENST00000460826 NDUFA1O15239 70 aa8.94□□□□□ -0.98
HDLBP-229ENST00000460826 ODF1Q14990 250 aa8.94□□□□□ -0.98
HDLBP-229ENST00000460826 SCXQ7RTU7 201 aa8.94□□□□□ -0.98
HDLBP-229ENST00000460826 Q8IZM0 81 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms