RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 DEFB131BA0A096LNP1 70 aa11.95□□□□□ -0.5
CDK11A-209ENST00000460465 TRAV8-3A0A0A6YYJ7 113 aa11.95□□□□□ -0.5
CDK11A-209ENST00000460465 IGKV3OR2-268A0A0C4DH90 116 aa11.95□□□□□ -0.5
CDK11A-209ENST00000460465 A0A1B0GUV1 79 aa11.95□□□□□ -0.5
CDK11A-209ENST00000460465 SPINK8P0C7L1 97 aa11.95□□□□□ -0.5
CDK11A-209ENST00000460465 LGALS3P17931 250 aaKnown RBP11.95□□□□□ -0.5
CDK11A-209ENST00000460465 BVES-AS1Q5T3Y7 98 aa11.95□□□□□ -0.5
CDK11A-209ENST00000460465 LELP1Q5T871 98 aa11.95□□□□□ -0.5
CDK11A-209ENST00000460465 VPS25Q9BRG1 176 aa11.95□□□□□ -0.5
CDK11A-209ENST00000460465 IGHV3-30-3P0DP02 117 aa11.94□□□□□ -0.5
CDK11A-209ENST00000460465 HSD52Q0P140 79 aa11.94□□□□□ -0.5
CDK11A-209ENST00000460465 PLEKHB2Q96CS7 222 aa11.94□□□□□ -0.5
CDK11A-209ENST00000460465 IGHV1-58A0A0C4DH39 117 aa11.93□□□□□ -0.5
CDK11A-209ENST00000460465 H3BRM9 83 aa11.93□□□□□ -0.5
CDK11A-209ENST00000460465 TAX1BP3O14907 124 aa11.93□□□□□ -0.5
CDK11A-209ENST00000460465 LYPD5Q6UWN5 251 aa11.93□□□□□ -0.5
CDK11A-209ENST00000460465 Q8N3U1 123 aa11.92□□□□□ -0.5
CDK11A-209ENST00000460465 SCGB1D4Q6XE38 83 aa11.91□□□□□ -0.5
CDK11A-209ENST00000460465 CLPSL2Q6UWE3 100 aa11.9□□□□□ -0.5
CDK11A-209ENST00000460465 HUWE1Q7Z6Z7 4374 aaKnown RBP11.9□□□□□ -0.5
CDK11A-209ENST00000460465 TRAV10A0A0B4J240 114 aa11.89□□□□□ -0.51
CDK11A-209ENST00000460465 LINC00959A0A1B0GUT2 108 aa11.89□□□□□ -0.51
CDK11A-209ENST00000460465 B9D2Q9BPU9 175 aa11.89□□□□□ -0.51
CDK11A-209ENST00000460465 SMIM1B2RUZ4 78 aa11.88□□□□□ -0.51
CDK11A-209ENST00000460465 ANGP03950 147 aaKnown RBP11.88□□□□□ -0.51
CDK11A-209ENST00000460465 LINC00269Q8N2A0 174 aa11.88□□□□□ -0.51
CDK11A-209ENST00000460465 IGLV5-39A0A0G2JS06 123 aa11.87□□□□□ -0.51
CDK11A-209ENST00000460465 GCSHP23434 173 aa11.87□□□□□ -0.51
CDK11A-209ENST00000460465 HIST1H4GQ99525 98 aa11.87□□□□□ -0.51
CDK11A-209ENST00000460465 TAL2Q16559 108 aa11.86□□□□□ -0.51
CDK11A-209ENST00000460465 SS18Q15532 418 aa11.86□□□□□ -0.51
CDK11A-209ENST00000460465 OCIAD2Q56VL3 154 aa11.86□□□□□ -0.51
CDK11A-209ENST00000460465 CEND1Q8N111 149 aa11.86□□□□□ -0.51
CDK11A-209ENST00000460465 NDUFA12Q9UI09 145 aa11.86□□□□□ -0.51
CDK11A-209ENST00000460465 IGHV3OR16-9A0A0B4J2B5 98 aa11.85□□□□□ -0.51
CDK11A-209ENST00000460465 ESRGQ1W209 222 aa11.85□□□□□ -0.51
CDK11A-209ENST00000460465 ZFAND6Q6FIF0 208 aa11.85□□□□□ -0.51
CDK11A-209ENST00000460465 C10orf126Q8N4M7 172 aa11.85□□□□□ -0.51
CDK11A-209ENST00000460465 FXYD2P54710 66 aa11.84□□□□□ -0.51
CDK11A-209ENST00000460465 REG3AQ06141 175 aa11.84□□□□□ -0.51
CDK11A-209ENST00000460465 WFDC10BQ8IUB3 73 aa11.84□□□□□ -0.51
CDK11A-209ENST00000460465 XCL1P47992 114 aa11.83□□□□□ -0.51
CDK11A-209ENST00000460465 A0A0J9YXY3 114 aa11.83□□□□□ -0.52
CDK11A-209ENST00000460465 TM2D2Q9BX73 214 aa11.83□□□□□ -0.52
CDK11A-209ENST00000460465 K7ERU9 68 aa11.82□□□□□ -0.52
CDK11A-209ENST00000460465 IGHV3-30P01768 117 aa11.82□□□□□ -0.52
CDK11A-209ENST00000460465 IGHV3-33P01772 117 aa11.82□□□□□ -0.52
CDK11A-209ENST00000460465 IGHV3-30-5P0DP03 117 aa11.82□□□□□ -0.52
CDK11A-209ENST00000460465 SRSF9Q13242 221 aaKnown RBP eCLIP11.82□□□□□ -0.52
CDK11A-209ENST00000460465 C5orf38Q86SI9 138 aa11.82□□□□□ -0.52
CDK11A-209ENST00000460465 SPANXB1Q9NS25 103 aaPredicted RBP11.82□□□□□ -0.52
CDK11A-209ENST00000460465 A0A087WZ39 114 aa11.81□□□□□ -0.52
CDK11A-209ENST00000460465 C15orf53Q8NAA6 179 aa11.81□□□□□ -0.52
CDK11A-209ENST00000460465 A6NDN8 102 aa11.81□□□□□ -0.52
CDK11A-209ENST00000460465 NDUFA1O15239 70 aa11.81□□□□□ -0.52
CDK11A-209ENST00000460465 KLK12Q9UKR0 248 aa11.81□□□□□ -0.52
CDK11A-209ENST00000460465 IGLV10-54A0A075B6I4 117 aa11.8□□□□□ -0.52
CDK11A-209ENST00000460465 KRTAP21-3Q3LHN1 58 aa11.79□□□□□ -0.52
CDK11A-209ENST00000460465 CHCHD10Q8WYQ3 142 aaPredicted RBP11.79□□□□□ -0.52
CDK11A-209ENST00000460465 A4D1N5 150 aa11.78□□□□□ -0.52
CDK11A-209ENST00000460465 Q9H8V8 135 aa11.78□□□□□ -0.52
CDK11A-209ENST00000460465 PRR34Q9NV39 138 aa11.78□□□□□ -0.52
CDK11A-209ENST00000460465 DNAH9Q9NYC9 4486 aa11.78□□□□□ -0.52
CDK11A-209ENST00000460465 COX7B2Q8TF08 81 aa11.78□□□□□ -0.52
CDK11A-209ENST00000460465 IGLL5B9A064 214 aa11.77□□□□□ -0.52
CDK11A-209ENST00000460465 CD164L2Q6UWJ8 174 aa11.77□□□□□ -0.52
CDK11A-209ENST00000460465 ENHOQ6UWT2 76 aa11.77□□□□□ -0.53
CDK11A-209ENST00000460465 LITAFQ99732 161 aa11.77□□□□□ -0.53
CDK11A-209ENST00000460465 TOMM7Q9P0U1 55 aa11.77□□□□□ -0.53
CDK11A-209ENST00000460465 COL7A1Q02388 2944 aa11.77□□□□□ -0.53
CDK11A-209ENST00000460465 NHP2Q9NX24 153 aaKnown RBP11.76□□□□□ -0.53
CDK11A-209ENST00000460465 ZNF625Q96I27 306 aaPredicted RBP11.76□□□□□ -0.53
CDK11A-209ENST00000460465 GAGE10A6NGK3 116 aa11.75□□□□□ -0.53
CDK11A-209ENST00000460465 NHLRC4P0CG21 123 aaPredicted RBP11.75□□□□□ -0.53
CDK11A-209ENST00000460465 K7ERJ3 54 aa11.74□□□□□ -0.53
CDK11A-209ENST00000460465 CRPP02741 224 aa11.74□□□□□ -0.53
CDK11A-209ENST00000460465 LINC01561Q8N1V8 128 aa11.74□□□□□ -0.53
CDK11A-209ENST00000460465 UBE2WQ96B02 151 aa11.74□□□□□ -0.53
CDK11A-209ENST00000460465 COX7A2LO14548 114 aa11.74□□□□□ -0.53
CDK11A-209ENST00000460465 FOXI1Q12951 378 aa11.74□□□□□ -0.53
CDK11A-209ENST00000460465 ADAMTSL4-AS1Q5T5F5 129 aa11.74□□□□□ -0.53
CDK11A-209ENST00000460465 DNHD1Q96M86 4753 aa11.73□□□□□ -0.53
CDK11A-209ENST00000460465 SMIM13P0DJ93 91 aa11.73□□□□□ -0.53
CDK11A-209ENST00000460465 RAB37Q96AX2 223 aa11.73□□□□□ -0.53
CDK11A-209ENST00000460465 LINC00588Q9Y4M8 146 aa11.73□□□□□ -0.53
CDK11A-209ENST00000460465 GAGE12HA6NDE8 117 aa11.72□□□□□ -0.53
CDK11A-209ENST00000460465 TIMM17BO60830 172 aa11.72□□□□□ -0.53
CDK11A-209ENST00000460465 SCGB1A1P11684 91 aa11.72□□□□□ -0.53
CDK11A-209ENST00000460465 LINC01556Q5JQF7 62 aa11.72□□□□□ -0.53
CDK11A-209ENST00000460465 C9orf118A6NHY6 69 aa11.72□□□□□ -0.53
CDK11A-209ENST00000460465 HERV-K104P63124 156 aa11.72□□□□□ -0.53
CDK11A-209ENST00000460465 SPANXDQ9BXN6 97 aa11.72□□□□□ -0.53
CDK11A-209ENST00000460465 SPANXCQ9NY87 97 aa11.72□□□□□ -0.53
CDK11A-209ENST00000460465 NAA38Q9BRA0 125 aaKnown RBP11.71□□□□□ -0.53
CDK11A-209ENST00000460465 H3BUT2 72 aa11.71□□□□□ -0.54
CDK11A-209ENST00000460465 GTF2H5Q6ZYL4 71 aa11.71□□□□□ -0.54
CDK11A-209ENST00000460465 MUSTN1Q8IVN3 82 aa11.71□□□□□ -0.54
CDK11A-209ENST00000460465 MIAQ16674 131 aa11.7□□□□□ -0.54
CDK11A-209ENST00000460465 TRAV8-4A0A0B4J246 113 aa11.7□□□□□ -0.54
CDK11A-209ENST00000460465 MALP21145 153 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms