RNA–Protein interactions for RNA: ENST00000460119.1

PDE6B-203, Transcript of phosphodiesterase 6B, humanhuman

TSL 4

Gene PDE6B, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-203ENST00000460119 FAM104BQ5XKR9 115 aa13.06□□□□□ -0.32
PDE6B-203ENST00000460119 IMMP2LQ96T52 175 aa13.06□□□□□ -0.32
PDE6B-203ENST00000460119 SRP19P09132 144 aaKnown RBP13.05□□□□□ -0.32
PDE6B-203ENST00000460119 KRTAP1-4P0C5Y4 121 aa13.05□□□□□ -0.32
PDE6B-203ENST00000460119 TMEM18Q96B42 140 aa13.05□□□□□ -0.32
PDE6B-203ENST00000460119 NDUFA1O15239 70 aa13.04□□□□□ -0.32
PDE6B-203ENST00000460119 PPP1R2P9O14990 202 aa13.03□□□□□ -0.32
PDE6B-203ENST00000460119 PRR4Q16378 134 aa13.03□□□□□ -0.32
PDE6B-203ENST00000460119 CKS2P33552 79 aa13.02□□□□□ -0.33
PDE6B-203ENST00000460119 TMEM241Q24JQ0 296 aa13.02□□□□□ -0.33
PDE6B-203ENST00000460119 C20orf78Q9BR46 151 aa13.02□□□□□ -0.33
PDE6B-203ENST00000460119 IGLV1-50A0A075B6I6 118 aa13.01□□□□□ -0.33
PDE6B-203ENST00000460119 TCAPO15273 167 aa13.01□□□□□ -0.33
PDE6B-203ENST00000460119 TNFRSF6BO95407 300 aa13.01□□□□□ -0.33
PDE6B-203ENST00000460119 TLX1NBP0CAT3 122 aa13.01□□□□□ -0.33
PDE6B-203ENST00000460119 NAT8BQ9UHF3 227 aa13.01□□□□□ -0.33
PDE6B-203ENST00000460119 TRBV24-1A0A075B6N3 115 aa13□□□□□ -0.33
PDE6B-203ENST00000460119 IFITM10A6NMD0 228 aa13□□□□□ -0.33
PDE6B-203ENST00000460119 KIAA0087Q14695 138 aa13□□□□□ -0.33
PDE6B-203ENST00000460119 SMDT1Q9H4I9 107 aa13□□□□□ -0.33
PDE6B-203ENST00000460119 F8WDY8 70 aa12.99□□□□□ -0.33
PDE6B-203ENST00000460119 UBE2BP63146 152 aa12.99□□□□□ -0.33
PDE6B-203ENST00000460119 LINC00862A6NCI5 91 aa12.98□□□□□ -0.33
PDE6B-203ENST00000460119 M0QXV9 152 aa12.98□□□□□ -0.33
PDE6B-203ENST00000460119 RPL23P62829 140 aaKnown RBP12.98□□□□□ -0.33
PDE6B-203ENST00000460119 HBBP68871 147 aa12.98□□□□□ -0.33
PDE6B-203ENST00000460119 FAM74A3Q4VXF1 159 aa12.98□□□□□ -0.33
PDE6B-203ENST00000460119 C2orf82Q6UX34 121 aa12.98□□□□□ -0.33
PDE6B-203ENST00000460119 SMIM2Q9BVW6 85 aa12.98□□□□□ -0.33
PDE6B-203ENST00000460119 SPANXA1Q9NS26 97 aa12.98□□□□□ -0.33
PDE6B-203ENST00000460119 RPL32P62910 135 aaKnown RBP12.97□□□□□ -0.33
PDE6B-203ENST00000460119 MRPS36P82909 103 aaKnown RBP12.97□□□□□ -0.33
PDE6B-203ENST00000460119 SMIM27A0A1W2PRY6 76 aa12.96□□□□□ -0.33
PDE6B-203ENST00000460119 D6R8Y8 96 aa12.96□□□□□ -0.33
PDE6B-203ENST00000460119 NPYP01303 97 aa12.96□□□□□ -0.33
PDE6B-203ENST00000460119 UBE2D1P51668 147 aa12.96□□□□□ -0.33
PDE6B-203ENST00000460119 C9orf129Q5T035 196 aaKnown RBP12.96□□□□□ -0.33
PDE6B-203ENST00000460119 C9JQL5 133 aa12.95□□□□□ -0.34
PDE6B-203ENST00000460119 ADIRFQ15847 76 aa12.95□□□□□ -0.34
PDE6B-203ENST00000460119 LINC00242Q5T6M2 205 aa12.94□□□□□ -0.34
PDE6B-203ENST00000460119 MRPL54Q6P161 138 aaKnown RBP12.94□□□□□ -0.34
PDE6B-203ENST00000460119 TGIF2-C20orf24A0A0A6YYL0 155 aa12.93□□□□□ -0.34
PDE6B-203ENST00000460119 TSPAN13O95857 204 aa12.92□□□□□ -0.34
PDE6B-203ENST00000460119 MUC2Q02817 5179 aa12.91□□□□□ -0.34
PDE6B-203ENST00000460119 ZC2HC1BQ5TFG8 222 aa12.91□□□□□ -0.34
PDE6B-203ENST00000460119 AKAP14Q86UN6 197 aa12.91□□□□□ -0.34
PDE6B-203ENST00000460119 hCG_2014768A0A024R1R8 64 aa12.9□□□□□ -0.34
PDE6B-203ENST00000460119 IGLV4-3A0A075B6K6 122 aa12.89□□□□□ -0.35
PDE6B-203ENST00000460119 TRBV30A0A0K0K1B3 111 aa12.89□□□□□ -0.35
PDE6B-203ENST00000460119 NDUFC2-KCTD14E9PQ53 114 aa12.89□□□□□ -0.35
PDE6B-203ENST00000460119 A0A1B0GW15 77 aa12.88□□□□□ -0.35
PDE6B-203ENST00000460119 RPL13AP40429 203 aaKnown RBP12.88□□□□□ -0.35
PDE6B-203ENST00000460119 SRSF3P84103 164 aaKnown RBP12.88□□□□□ -0.35
PDE6B-203ENST00000460119 LINC00469Q8N7U9 141 aa12.88□□□□□ -0.35
PDE6B-203ENST00000460119 PACRGQ96M98 296 aaPredicted RBP12.88□□□□□ -0.35
PDE6B-203ENST00000460119 A0A1B0GXF2 115 aa12.87□□□□□ -0.35
PDE6B-203ENST00000460119 ZNF861PO60384 105 aa12.87□□□□□ -0.35
PDE6B-203ENST00000460119 IFI27P40305 119 aaPredicted RBP12.87□□□□□ -0.35
PDE6B-203ENST00000460119 NAT8Q9UHE5 227 aa12.87□□□□□ -0.35
PDE6B-203ENST00000460119 RAB5AP20339 215 aa12.86□□□□□ -0.35
PDE6B-203ENST00000460119 C22orf24Q9Y442 160 aa12.86□□□□□ -0.35
PDE6B-203ENST00000460119 F8W036 122 aa12.85□□□□□ -0.35
PDE6B-203ENST00000460119 TMEM136Q6ZRR5 245 aa12.85□□□□□ -0.35
PDE6B-203ENST00000460119 CARHSP1Q9Y2V2 147 aaKnown RBP12.85□□□□□ -0.35
PDE6B-203ENST00000460119 PYGO1Q9Y3Y4 419 aa12.85□□□□□ -0.35
PDE6B-203ENST00000460119 LOC389332A0A1B0GUA5 103 aa12.84□□□□□ -0.35
PDE6B-203ENST00000460119 TMEM141Q96I45 108 aa12.84□□□□□ -0.35
PDE6B-203ENST00000460119 KRTAP9-2Q9BYQ4 174 aa12.84□□□□□ -0.35
PDE6B-203ENST00000460119 XAGE1AQ9HD64 81 aa12.84□□□□□ -0.35
PDE6B-203ENST00000460119 PRELID3AQ96N28 172 aa12.83□□□□□ -0.36
PDE6B-203ENST00000460119 CTDSP1Q9GZU7 261 aa12.83□□□□□ -0.36
PDE6B-203ENST00000460119 TOMM7Q9P0U1 55 aa12.83□□□□□ -0.36
PDE6B-203ENST00000460119 PPBPP02775 128 aa12.82□□□□□ -0.36
PDE6B-203ENST00000460119 ORMDL3Q8N138 153 aa12.82□□□□□ -0.36
PDE6B-203ENST00000460119 S100A8P05109 93 aa12.81□□□□□ -0.36
PDE6B-203ENST00000460119 TEX43Q6ZNM6 134 aa12.81□□□□□ -0.36
PDE6B-203ENST00000460119 A0A087X002 238 aa12.8□□□□□ -0.36
PDE6B-203ENST00000460119 LINC00173Q6ZV60 143 aa12.8□□□□□ -0.36
PDE6B-203ENST00000460119 PRSS2P07478 247 aa12.79□□□□□ -0.36
PDE6B-203ENST00000460119 C6orf226Q5I0X4 101 aa12.79□□□□□ -0.36
PDE6B-203ENST00000460119 LINC01561Q8N1V8 128 aa12.79□□□□□ -0.36
PDE6B-203ENST00000460119 CKS1BP61024 79 aa12.78□□□□□ -0.36
PDE6B-203ENST00000460119 Q6ZN92 141 aa12.78□□□□□ -0.36
PDE6B-203ENST00000460119 ANAPC11Q9NYG5 84 aa12.78□□□□□ -0.36
PDE6B-203ENST00000460119 LBHQ53QV2 105 aaPredicted RBP12.77□□□□□ -0.37
PDE6B-203ENST00000460119 PEA15Q15121 130 aa12.76□□□□□ -0.37
PDE6B-203ENST00000460119 AMELXQ99217 191 aa12.76□□□□□ -0.37
PDE6B-203ENST00000460119 C2orf88Q9BSF0 95 aa12.76□□□□□ -0.37
PDE6B-203ENST00000460119 ALKBH7Q9BT30 221 aaPredicted RBP12.76□□□□□ -0.37
PDE6B-203ENST00000460119 VCX2Q9H322 139 aa12.76□□□□□ -0.37
PDE6B-203ENST00000460119 NUPR1O60356 82 aa12.75□□□□□ -0.37
PDE6B-203ENST00000460119 C2orf66Q6UXQ4 117 aa12.75□□□□□ -0.37
PDE6B-203ENST00000460119 A0A0U1RQV1 116 aa12.74□□□□□ -0.37
PDE6B-203ENST00000460119 PRSS47A8MTI9 375 aa12.74□□□□□ -0.37
PDE6B-203ENST00000460119 CYSLTR1Q9Y271 337 aa12.74□□□□□ -0.37
PDE6B-203ENST00000460119 TYMSOSQ8TAI1 123 aa12.73□□□□□ -0.37
PDE6B-203ENST00000460119 RPL37AP8A6NKH3 93 aa12.72□□□□□ -0.37
PDE6B-203ENST00000460119 BCE1O60756 84 aa12.72□□□□□ -0.37
PDE6B-203ENST00000460119 MRPL55Q7Z7F7 128 aaKnown RBP12.72□□□□□ -0.37
PDE6B-203ENST00000460119 Q8IZM0 81 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms