RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 C16orf95Q9H693 158 aa4.4□□□□□ -1.71
UBQLN4-202ENST00000459954 GAGE2DQ9UEU5 116 aa4.4□□□□□ -1.71
UBQLN4-202ENST00000459954 CDKN2A-AS1Q9UH64 79 aa4.4□□□□□ -1.71
UBQLN4-202ENST00000459954 STAB1Q9NY15 2570 aa4.4□□□□□ -1.71
UBQLN4-202ENST00000459954 FBN1P35555 2871 aaKnown RBP4.39□□□□□ -1.71
UBQLN4-202ENST00000459954 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.39□□□□□ -1.71
UBQLN4-202ENST00000459954 IGHV3-73A0A0B4J1V6 119 aa4.39□□□□□ -1.71
UBQLN4-202ENST00000459954 IGKV2-29A2NJV5 120 aaPredicted RBP4.39□□□□□ -1.71
UBQLN4-202ENST00000459954 DNAJC9-AS1A6NH13 148 aa4.39□□□□□ -1.71
UBQLN4-202ENST00000459954 H7C2G1 150 aa4.39□□□□□ -1.71
UBQLN4-202ENST00000459954 K7EQD1 137 aa4.39□□□□□ -1.71
UBQLN4-202ENST00000459954 COX7A2LO14548 114 aa4.39□□□□□ -1.71
UBQLN4-202ENST00000459954 TRACP01848 142 aa4.39□□□□□ -1.71
UBQLN4-202ENST00000459954 FAM222AQ5U5X8 452 aa4.39□□□□□ -1.71
UBQLN4-202ENST00000459954 CEMP1Q6PRD7 247 aaPredicted RBP4.39□□□□□ -1.71
UBQLN4-202ENST00000459954 PRIMA1Q86XR5 153 aa4.39□□□□□ -1.71
UBQLN4-202ENST00000459954 ZNF625Q96I27 306 aaPredicted RBP4.39□□□□□ -1.71
UBQLN4-202ENST00000459954 IMUPQ9GZP8 106 aa4.39□□□□□ -1.71
UBQLN4-202ENST00000459954 TRAV26-1A0A087WT03 109 aa4.38□□□□□ -1.71
UBQLN4-202ENST00000459954 SMIM1B2RUZ4 78 aa4.38□□□□□ -1.71
UBQLN4-202ENST00000459954 F5H768 121 aa4.38□□□□□ -1.71
UBQLN4-202ENST00000459954 GAGE5Q13069 117 aa4.38□□□□□ -1.71
UBQLN4-202ENST00000459954 GAGE6Q13070 117 aa4.38□□□□□ -1.71
UBQLN4-202ENST00000459954 ODF3L2Q3SX64 289 aa4.38□□□□□ -1.71
UBQLN4-202ENST00000459954 STHQ8IWL8 128 aa4.38□□□□□ -1.71
UBQLN4-202ENST00000459954 C1orf158Q8N1D5 194 aa4.38□□□□□ -1.71
UBQLN4-202ENST00000459954 OVOL2Q9BRP0 275 aa4.38□□□□□ -1.71
UBQLN4-202ENST00000459954 ANAPC13Q9BS18 74 aa4.38□□□□□ -1.71
UBQLN4-202ENST00000459954 CDC42SE2Q9NRR3 84 aa4.38□□□□□ -1.71
UBQLN4-202ENST00000459954 TRAV13-2A0A0B4J235 113 aa4.37□□□□□ -1.71
UBQLN4-202ENST00000459954 TRBV7-7A0A0K0K1E9 115 aa4.37□□□□□ -1.71
UBQLN4-202ENST00000459954 TEX49A0A1B0GTD5 131 aa4.37□□□□□ -1.71
UBQLN4-202ENST00000459954 TRBV6-4A0A1B0GX49 114 aa4.37□□□□□ -1.71
UBQLN4-202ENST00000459954 ADARB2-AS1A8MUL3 147 aa4.37□□□□□ -1.71
UBQLN4-202ENST00000459954 HTN1P15515 57 aa4.37□□□□□ -1.71
UBQLN4-202ENST00000459954 NDUFV3P56181 108 aaKnown RBP4.37□□□□□ -1.71
UBQLN4-202ENST00000459954 COX6A2Q02221 97 aa4.37□□□□□ -1.71
UBQLN4-202ENST00000459954 C18orf65Q6ZTR6 163 aa4.37□□□□□ -1.71
UBQLN4-202ENST00000459954 C16orf74Q96GX8 76 aa4.37□□□□□ -1.71
UBQLN4-202ENST00000459954 Q9H8V8 135 aa4.37□□□□□ -1.71
UBQLN4-202ENST00000459954 ESM1Q9NQ30 184 aa4.37□□□□□ -1.71
UBQLN4-202ENST00000459954 Q9UF83 564 aa4.37□□□□□ -1.71
UBQLN4-202ENST00000459954 RPL28P46779 137 aaKnown RBP4.36□□□□□ -1.71
UBQLN4-202ENST00000459954 DEFB136Q30KP8 78 aa4.36□□□□□ -1.71
UBQLN4-202ENST00000459954 RNASE13Q5GAN3 156 aaKnown RBP4.36□□□□□ -1.71
UBQLN4-202ENST00000459954 TTC32Q5I0X7 151 aa4.36□□□□□ -1.71
UBQLN4-202ENST00000459954 SDIM1Q6ZPB5 146 aa4.36□□□□□ -1.71
UBQLN4-202ENST00000459954 NTM-AS1Q6ZSK4 140 aa4.36□□□□□ -1.71
UBQLN4-202ENST00000459954 LINC01561Q8N1V8 128 aa4.36□□□□□ -1.71
UBQLN4-202ENST00000459954 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.36□□□□□ -1.71
UBQLN4-202ENST00000459954 C3orf56Q8N813 242 aa4.36□□□□□ -1.71
UBQLN4-202ENST00000459954 C15orf53Q8NAA6 179 aa4.36□□□□□ -1.71
UBQLN4-202ENST00000459954 TMEM243Q9BU79 118 aa4.36□□□□□ -1.71
UBQLN4-202ENST00000459954 TRGV1A0A0A0MS02 117 aa4.35□□□□□ -1.71
UBQLN4-202ENST00000459954 IGHV3-38A0A0C4DH36 116 aa4.35□□□□□ -1.71
UBQLN4-202ENST00000459954 A8MZ25 164 aa4.35□□□□□ -1.71
UBQLN4-202ENST00000459954 CCL24O00175 119 aa4.35□□□□□ -1.71
UBQLN4-202ENST00000459954 NHLRC4P0CG21 123 aaPredicted RBP4.35□□□□□ -1.71
UBQLN4-202ENST00000459954 KRTAP24-1Q3LI83 254 aa4.35□□□□□ -1.71
UBQLN4-202ENST00000459954 MEIG1Q5JSS6 88 aa4.35□□□□□ -1.71
UBQLN4-202ENST00000459954 HIST2H2BDQ6DRA6 164 aa4.35□□□□□ -1.71
UBQLN4-202ENST00000459954 Q6ZSV7 163 aa4.35□□□□□ -1.71
UBQLN4-202ENST00000459954 DAND5Q8N907 189 aa4.35□□□□□ -1.71
UBQLN4-202ENST00000459954 CLEC2BQ92478 149 aa4.35□□□□□ -1.71
UBQLN4-202ENST00000459954 XCL2Q9UBD3 114 aa4.35□□□□□ -1.71
UBQLN4-202ENST00000459954 GAGE12JA6NER3 117 aa4.34□□□□□ -1.71
UBQLN4-202ENST00000459954 H0YGX0 51 aa4.34□□□□□ -1.71
UBQLN4-202ENST00000459954 UBE2L6O14933 153 aa4.34□□□□□ -1.71
UBQLN4-202ENST00000459954 GAGE7O76087 117 aa4.34□□□□□ -1.71
UBQLN4-202ENST00000459954 PRM2P04554 102 aa4.34□□□□□ -1.71
UBQLN4-202ENST00000459954 ATP5G1P05496 136 aa4.34□□□□□ -1.71
UBQLN4-202ENST00000459954 GAGE12FP0CL80 117 aa4.34□□□□□ -1.71
UBQLN4-202ENST00000459954 GAGE12GP0CL81 117 aa4.34□□□□□ -1.71
UBQLN4-202ENST00000459954 GAGE12IP0CL82 117 aa4.34□□□□□ -1.71
UBQLN4-202ENST00000459954 INAFM2P0DMQ5 153 aa4.34□□□□□ -1.71
UBQLN4-202ENST00000459954 LINC00694P0DN24 101 aa4.34□□□□□ -1.71
UBQLN4-202ENST00000459954 CXCL5P42830 114 aa4.34□□□□□ -1.71
UBQLN4-202ENST00000459954 GAGE4Q13068 117 aa4.34□□□□□ -1.71
UBQLN4-202ENST00000459954 SOSTDC1Q6X4U4 206 aa4.34□□□□□ -1.71
UBQLN4-202ENST00000459954 LINC01006Q8NI28 216 aa4.34□□□□□ -1.71
UBQLN4-202ENST00000459954 COX7B2Q8TF08 81 aa4.34□□□□□ -1.71
UBQLN4-202ENST00000459954 PLAC8L1A1L4L8 177 aa4.33□□□□□ -1.72
UBQLN4-202ENST00000459954 IBA57-AS1B1ANH7 110 aa4.33□□□□□ -1.72
UBQLN4-202ENST00000459954 BAALC-AS2P0C853 105 aa4.33□□□□□ -1.72
UBQLN4-202ENST00000459954 Q6ZTI0 123 aa4.33□□□□□ -1.72
UBQLN4-202ENST00000459954 LINC00643Q86TS7 51 aa4.33□□□□□ -1.72
UBQLN4-202ENST00000459954 KIR2DL5BQ8NHK3 375 aa4.33□□□□□ -1.72
UBQLN4-202ENST00000459954 WNK1Q9H4A3 2382 aa4.33□□□□□ -1.72
UBQLN4-202ENST00000459954 A0A087WZ39 114 aa4.32□□□□□ -1.72
UBQLN4-202ENST00000459954 TRAV13-1A0A0B4J241 112 aa4.32□□□□□ -1.72
UBQLN4-202ENST00000459954 A0A1B0GX51 115 aa4.32□□□□□ -1.72
UBQLN4-202ENST00000459954 A0A1W2PRX2 142 aa4.32□□□□□ -1.72
UBQLN4-202ENST00000459954 IGLV1-51P01701 117 aa4.32□□□□□ -1.72
UBQLN4-202ENST00000459954 GIG44P09565 113 aaPredicted RBP4.32□□□□□ -1.72
UBQLN4-202ENST00000459954 NPC2P61916 151 aa4.32□□□□□ -1.72
UBQLN4-202ENST00000459954 KHDC1LQ5JSQ8 128 aa4.32□□□□□ -1.72
UBQLN4-202ENST00000459954 C11orf44Q8N8P7 122 aa4.32□□□□□ -1.72
UBQLN4-202ENST00000459954 CSNK1G2-AS1Q8NCQ2 148 aa4.32□□□□□ -1.72
UBQLN4-202ENST00000459954 C19orf73Q9NVV2 129 aa4.32□□□□□ -1.72
UBQLN4-202ENST00000459954 TENM1Q9UKZ4 2725 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms