RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 C20orf78Q9BR46 151 aa7.44□□□□□ -1.22
GPNMB-204ENST00000459927 EIF5A2Q9GZV4 153 aaKnown RBP7.44□□□□□ -1.22
GPNMB-204ENST00000459927 ALKAL2Q6UX46 152 aa7.43□□□□□ -1.22
GPNMB-204ENST00000459927 KRTAP7-1Q8IUC3 87 aa7.43□□□□□ -1.22
GPNMB-204ENST00000459927 ORAOV1Q8WV07 137 aa7.43□□□□□ -1.22
GPNMB-204ENST00000459927 IGLV1-50A0A075B6I6 118 aa7.42□□□□□ -1.22
GPNMB-204ENST00000459927 NDUFA1O15239 70 aa7.42□□□□□ -1.22
GPNMB-204ENST00000459927 SRP19P09132 144 aaKnown RBP7.42□□□□□ -1.22
GPNMB-204ENST00000459927 KRTAP1-4P0C5Y4 121 aa7.42□□□□□ -1.22
GPNMB-204ENST00000459927 RPL39P62891 51 aaKnown RBP7.42□□□□□ -1.22
GPNMB-204ENST00000459927 RPL32P62910 135 aaKnown RBP7.42□□□□□ -1.22
GPNMB-204ENST00000459927 C6orf48Q9UBA6 75 aa7.42□□□□□ -1.22
GPNMB-204ENST00000459927 NAT8BQ9UHF3 227 aa7.42□□□□□ -1.22
GPNMB-204ENST00000459927 CKS2P33552 79 aa7.41□□□□□ -1.22
GPNMB-204ENST00000459927 MRPS36P82909 103 aaKnown RBP7.41□□□□□ -1.22
GPNMB-204ENST00000459927 KIAA0087Q14695 138 aa7.41□□□□□ -1.22
GPNMB-204ENST00000459927 GAGE2EQ4V326 116 aa7.41□□□□□ -1.22
GPNMB-204ENST00000459927 GAGE2DQ9UEU5 116 aa7.41□□□□□ -1.22
GPNMB-204ENST00000459927 MUC2Q02817 5179 aa7.41□□□□□ -1.22
GPNMB-204ENST00000459927 TCAPO15273 167 aa7.4□□□□□ -1.22
GPNMB-204ENST00000459927 TNFRSF6BO95407 300 aa7.4□□□□□ -1.22
GPNMB-204ENST00000459927 FAM74A3Q4VXF1 159 aa7.4□□□□□ -1.22
GPNMB-204ENST00000459927 SMIM27A0A1W2PRY6 76 aa7.39□□□□□ -1.23
GPNMB-204ENST00000459927 FAM19A5Q7Z5A7 132 aaPredicted RBP7.39□□□□□ -1.23
GPNMB-204ENST00000459927 SMDT1Q9H4I9 107 aa7.39□□□□□ -1.23
GPNMB-204ENST00000459927 SPANXA1Q9NS26 97 aa7.39□□□□□ -1.23
GPNMB-204ENST00000459927 RPL23P62829 140 aaKnown RBP7.38□□□□□ -1.23
GPNMB-204ENST00000459927 PRR4Q16378 134 aa7.38□□□□□ -1.23
GPNMB-204ENST00000459927 A0A1B0GW15 77 aa7.37□□□□□ -1.23
GPNMB-204ENST00000459927 HBBP68871 147 aa7.37□□□□□ -1.23
GPNMB-204ENST00000459927 CARHSP1Q9Y2V2 147 aaKnown RBP7.37□□□□□ -1.23
GPNMB-204ENST00000459927 TRBV30A0A0K0K1B3 111 aa7.36□□□□□ -1.23
GPNMB-204ENST00000459927 IFITM10A6NMD0 228 aa7.36□□□□□ -1.23
GPNMB-204ENST00000459927 UBE2BP63146 152 aa7.36□□□□□ -1.23
GPNMB-204ENST00000459927 C9orf129Q5T035 196 aaKnown RBP7.36□□□□□ -1.23
GPNMB-204ENST00000459927 LINC00242Q5T6M2 205 aa7.36□□□□□ -1.23
GPNMB-204ENST00000459927 SMIM2Q9BVW6 85 aa7.36□□□□□ -1.23
GPNMB-204ENST00000459927 TGIF2-C20orf24A0A0A6YYL0 155 aa7.35□□□□□ -1.23
GPNMB-204ENST00000459927 D6R8Y8 96 aa7.35□□□□□ -1.23
GPNMB-204ENST00000459927 NDUFC2-KCTD14E9PQ53 114 aa7.35□□□□□ -1.23
GPNMB-204ENST00000459927 M0QXV9 152 aa7.35□□□□□ -1.23
GPNMB-204ENST00000459927 RPL13AP40429 203 aaKnown RBP7.35□□□□□ -1.23
GPNMB-204ENST00000459927 UBE2D1P51668 147 aa7.35□□□□□ -1.23
GPNMB-204ENST00000459927 C2orf82Q6UX34 121 aa7.35□□□□□ -1.23
GPNMB-204ENST00000459927 PYGO1Q9Y3Y4 419 aa7.35□□□□□ -1.23
GPNMB-204ENST00000459927 C9JQL5 133 aa7.34□□□□□ -1.23
GPNMB-204ENST00000459927 ZNF861PO60384 105 aa7.34□□□□□ -1.23
GPNMB-204ENST00000459927 NPYP01303 97 aa7.34□□□□□ -1.23
GPNMB-204ENST00000459927 F8W036 122 aa7.33□□□□□ -1.24
GPNMB-204ENST00000459927 PPBPP02775 128 aa7.33□□□□□ -1.24
GPNMB-204ENST00000459927 RAB5AP20339 215 aa7.33□□□□□ -1.24
GPNMB-204ENST00000459927 ADIRFQ15847 76 aa7.33□□□□□ -1.24
GPNMB-204ENST00000459927 LINC01561Q8N1V8 128 aa7.33□□□□□ -1.24
GPNMB-204ENST00000459927 PACRGQ96M98 296 aaPredicted RBP7.33□□□□□ -1.24
GPNMB-204ENST00000459927 NAT8Q9UHE5 227 aa7.33□□□□□ -1.24
GPNMB-204ENST00000459927 IGLV4-3A0A075B6K6 122 aa7.32□□□□□ -1.24
GPNMB-204ENST00000459927 PRSS47A8MTI9 375 aa7.32□□□□□ -1.24
GPNMB-204ENST00000459927 S100A8P05109 93 aa7.32□□□□□ -1.24
GPNMB-204ENST00000459927 IFI27P40305 119 aaPredicted RBP7.32□□□□□ -1.24
GPNMB-204ENST00000459927 TMEM136Q6ZRR5 245 aa7.32□□□□□ -1.24
GPNMB-204ENST00000459927 AKAP14Q86UN6 197 aa7.32□□□□□ -1.24
GPNMB-204ENST00000459927 C22orf24Q9Y442 160 aa7.32□□□□□ -1.24
GPNMB-204ENST00000459927 A0A1B0GXF2 115 aa7.31□□□□□ -1.24
GPNMB-204ENST00000459927 TSPAN13O95857 204 aa7.31□□□□□ -1.24
GPNMB-204ENST00000459927 MRPL54Q6P161 138 aaKnown RBP7.31□□□□□ -1.24
GPNMB-204ENST00000459927 TMEM141Q96I45 108 aa7.31□□□□□ -1.24
GPNMB-204ENST00000459927 SRSF3P84103 164 aaKnown RBP7.3□□□□□ -1.24
GPNMB-204ENST00000459927 NUPR1O60356 82 aa7.29□□□□□ -1.24
GPNMB-204ENST00000459927 LBHQ53QV2 105 aaPredicted RBP7.29□□□□□ -1.24
GPNMB-204ENST00000459927 C6orf226Q5I0X4 101 aa7.29□□□□□ -1.24
GPNMB-204ENST00000459927 ZC2HC1BQ5TFG8 222 aa7.29□□□□□ -1.24
GPNMB-204ENST00000459927 Q6ZN92 141 aa7.29□□□□□ -1.24
GPNMB-204ENST00000459927 ORMDL3Q8N138 153 aa7.29□□□□□ -1.24
GPNMB-204ENST00000459927 PRELID3AQ96N28 172 aa7.29□□□□□ -1.24
GPNMB-204ENST00000459927 CTDSP1Q9GZU7 261 aa7.29□□□□□ -1.24
GPNMB-204ENST00000459927 PEA15Q15121 130 aa7.28□□□□□ -1.24
GPNMB-204ENST00000459927 TEX43Q6ZNM6 134 aa7.28□□□□□ -1.24
GPNMB-204ENST00000459927 LINC00469Q8N7U9 141 aa7.28□□□□□ -1.24
GPNMB-204ENST00000459927 AMELXQ99217 191 aa7.28□□□□□ -1.24
GPNMB-204ENST00000459927 KRTAP9-2Q9BYQ4 174 aa7.28□□□□□ -1.24
GPNMB-204ENST00000459927 VCX2Q9H322 139 aa7.28□□□□□ -1.24
GPNMB-204ENST00000459927 A0A0U1RQV1 116 aa7.27□□□□□ -1.25
GPNMB-204ENST00000459927 LOC389332A0A1B0GUA5 103 aa7.27□□□□□ -1.25
GPNMB-204ENST00000459927 PRSS2P07478 247 aa7.27□□□□□ -1.25
GPNMB-204ENST00000459927 CKS1BP61024 79 aa7.27□□□□□ -1.25
GPNMB-204ENST00000459927 C2orf66Q6UXQ4 117 aa7.27□□□□□ -1.25
GPNMB-204ENST00000459927 XAGE1AQ9HD64 81 aa7.27□□□□□ -1.25
GPNMB-204ENST00000459927 TOMM7Q9P0U1 55 aa7.27□□□□□ -1.25
GPNMB-204ENST00000459927 LINC00173Q6ZV60 143 aa7.26□□□□□ -1.25
GPNMB-204ENST00000459927 FAM19A3Q7Z5A8 133 aa7.26□□□□□ -1.25
GPNMB-204ENST00000459927 C2orf88Q9BSF0 95 aa7.26□□□□□ -1.25
GPNMB-204ENST00000459927 ALKBH7Q9BT30 221 aaPredicted RBP7.26□□□□□ -1.25
GPNMB-204ENST00000459927 FAT4Q6V0I7 4981 aa7.25□□□□□ -1.25
GPNMB-204ENST00000459927 hCG_2014768A0A024R1R8 64 aa7.25□□□□□ -1.25
GPNMB-204ENST00000459927 A0A087X002 238 aa7.25□□□□□ -1.25
GPNMB-204ENST00000459927 IGIPA6NJ69 53 aa7.25□□□□□ -1.25
GPNMB-204ENST00000459927 ATP5L2Q7Z4Y8 100 aa7.25□□□□□ -1.25
GPNMB-204ENST00000459927 Q8IZM0 81 aa7.25□□□□□ -1.25
GPNMB-204ENST00000459927 Q8N8P6 123 aa7.25□□□□□ -1.25
GPNMB-204ENST00000459927 CRYGAP11844 174 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms