RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 SRSF9Q13242 221 aaKnown RBP eCLIP4.04□□□□□ -1.76
RNU1-88P-201ENST00000459274 ESRGQ1W209 222 aa4.04□□□□□ -1.76
RNU1-88P-201ENST00000459274 MPV17L2Q567V2 206 aa4.04□□□□□ -1.76
RNU1-88P-201ENST00000459274 C6orf226Q5I0X4 101 aa4.04□□□□□ -1.76
RNU1-88P-201ENST00000459274 TTC32Q5I0X7 151 aa4.04□□□□□ -1.76
RNU1-88P-201ENST00000459274 NFE4Q86UQ8 179 aa4.04□□□□□ -1.76
RNU1-88P-201ENST00000459274 STPG4Q8N801 248 aa4.04□□□□□ -1.76
RNU1-88P-201ENST00000459274 Q8N976 141 aa4.04□□□□□ -1.76
RNU1-88P-201ENST00000459274 UBE2WQ96B02 151 aa4.04□□□□□ -1.76
RNU1-88P-201ENST00000459274 WWC2-AS2Q96NR7 200 aa4.04□□□□□ -1.76
RNU1-88P-201ENST00000459274 MIEN1Q9BRT3 115 aa4.04□□□□□ -1.76
RNU1-88P-201ENST00000459274 TM2D2Q9BX73 214 aa4.04□□□□□ -1.76
RNU1-88P-201ENST00000459274 MRPS16Q9Y3D3 137 aaKnown RBP4.04□□□□□ -1.76
RNU1-88P-201ENST00000459274 CUBNO60494 3623 aa4.03□□□□□ -1.76
RNU1-88P-201ENST00000459274 LINC00959A0A1B0GUT2 108 aa4.03□□□□□ -1.76
RNU1-88P-201ENST00000459274 E9PLD3 99 aa4.03□□□□□ -1.76
RNU1-88P-201ENST00000459274 M0R143 59 aa4.03□□□□□ -1.76
RNU1-88P-201ENST00000459274 COX7A2LO14548 114 aa4.03□□□□□ -1.76
RNU1-88P-201ENST00000459274 LEPROTO15243 131 aa4.03□□□□□ -1.76
RNU1-88P-201ENST00000459274 XCL1P47992 114 aa4.03□□□□□ -1.76
RNU1-88P-201ENST00000459274 LINC01556Q5JQF7 62 aa4.03□□□□□ -1.76
RNU1-88P-201ENST00000459274 MUC7Q8TAX7 377 aa4.03□□□□□ -1.76
RNU1-88P-201ENST00000459274 C14orf144Q96I85 54 aa4.03□□□□□ -1.76
RNU1-88P-201ENST00000459274 PRO1933Q9H354 126 aa4.03□□□□□ -1.76
RNU1-88P-201ENST00000459274 Q9H8V8 135 aa4.03□□□□□ -1.76
RNU1-88P-201ENST00000459274 TOMM7Q9P0U1 55 aa4.03□□□□□ -1.76
RNU1-88P-201ENST00000459274 IGLV4-60A0A075B6I1 120 aa4.02□□□□□ -1.77
RNU1-88P-201ENST00000459274 IGKV2D-24A0A075B6R9 120 aa4.02□□□□□ -1.77
RNU1-88P-201ENST00000459274 IGHV1-58A0A0C4DH39 117 aa4.02□□□□□ -1.77
RNU1-88P-201ENST00000459274 ZNF815PA8K554 130 aa4.02□□□□□ -1.77
RNU1-88P-201ENST00000459274 J3QQQ9 107 aa4.02□□□□□ -1.77
RNU1-88P-201ENST00000459274 ZNF561-AS1K7EIQ3 104 aa4.02□□□□□ -1.77
RNU1-88P-201ENST00000459274 COX8AP10176 69 aa4.02□□□□□ -1.77
RNU1-88P-201ENST00000459274 HERV-K104P63124 156 aa4.02□□□□□ -1.77
RNU1-88P-201ENST00000459274 LINC00242Q5T6M2 205 aa4.02□□□□□ -1.77
RNU1-88P-201ENST00000459274 CLPSL2Q6UWE3 100 aa4.02□□□□□ -1.77
RNU1-88P-201ENST00000459274 CD164L2Q6UWJ8 174 aa4.02□□□□□ -1.77
RNU1-88P-201ENST00000459274 BOD1L2Q8IYS8 172 aa4.02□□□□□ -1.77
RNU1-88P-201ENST00000459274 CHCHD10Q8WYQ3 142 aaPredicted RBP4.02□□□□□ -1.77
RNU1-88P-201ENST00000459274 IGLV4-69A0A075B6H9 119 aa4.01□□□□□ -1.77
RNU1-88P-201ENST00000459274 IGLV10-54A0A075B6I4 117 aa4.01□□□□□ -1.77
RNU1-88P-201ENST00000459274 IGHV3-64A0A075B6Q5 118 aa4.01□□□□□ -1.77
RNU1-88P-201ENST00000459274 TMEM238LA0A1B0GVL6 79 aa4.01□□□□□ -1.77
RNU1-88P-201ENST00000459274 TMEM223A0PJW6 202 aa4.01□□□□□ -1.77
RNU1-88P-201ENST00000459274 A6NJY4 79 aa4.01□□□□□ -1.77
RNU1-88P-201ENST00000459274 TMEM238C9JI98 176 aa4.01□□□□□ -1.77
RNU1-88P-201ENST00000459274 C3orf84H3BNL1 204 aa4.01□□□□□ -1.77
RNU1-88P-201ENST00000459274 DLEU1O43261 78 aa4.01□□□□□ -1.77
RNU1-88P-201ENST00000459274 SPINK8P0C7L1 97 aa4.01□□□□□ -1.77
RNU1-88P-201ENST00000459274 DNAH10OSP0CZ25 163 aa4.01□□□□□ -1.77
RNU1-88P-201ENST00000459274 ZNF22P17026 224 aaPredicted RBP4.01□□□□□ -1.77
RNU1-88P-201ENST00000459274 DDTP30046 118 aa4.01□□□□□ -1.77
RNU1-88P-201ENST00000459274 CXCL5P42830 114 aa4.01□□□□□ -1.77
RNU1-88P-201ENST00000459274 PTTG1IPP53801 180 aa4.01□□□□□ -1.77
RNU1-88P-201ENST00000459274 MEIG1Q5JSS6 88 aa4.01□□□□□ -1.77
RNU1-88P-201ENST00000459274 FAM19A3Q7Z5A8 133 aa4.01□□□□□ -1.77
RNU1-88P-201ENST00000459274 WFDC10BQ8IUB3 73 aa4.01□□□□□ -1.77
RNU1-88P-201ENST00000459274 LINC01561Q8N1V8 128 aa4.01□□□□□ -1.77
RNU1-88P-201ENST00000459274 HIST1H4GQ99525 98 aa4.01□□□□□ -1.77
RNU1-88P-201ENST00000459274 UPK3BQ9BT76 320 aa4.01□□□□□ -1.77
RNU1-88P-201ENST00000459274 CDKN2A-AS1Q9UH64 79 aa4.01□□□□□ -1.77
RNU1-88P-201ENST00000459274 A0A087WZ39 114 aa4□□□□□ -1.77
RNU1-88P-201ENST00000459274 GAGE12HA6NDE8 117 aa4□□□□□ -1.77
RNU1-88P-201ENST00000459274 A6NDN8 102 aa4□□□□□ -1.77
RNU1-88P-201ENST00000459274 MAJINQ3KP22 176 aa4□□□□□ -1.77
RNU1-88P-201ENST00000459274 ZFAND6Q6FIF0 208 aa4□□□□□ -1.77
RNU1-88P-201ENST00000459274 C5orf38Q86SI9 138 aa4□□□□□ -1.77
RNU1-88P-201ENST00000459274 COX7B2Q8TF08 81 aa4□□□□□ -1.77
RNU1-88P-201ENST00000459274 Q9HAA7 133 aa4□□□□□ -1.77
RNU1-88P-201ENST00000459274 NDUFA12Q9UI09 145 aa4□□□□□ -1.77
RNU1-88P-201ENST00000459274 APLNQ9ULZ1 77 aa4□□□□□ -1.77
RNU1-88P-201ENST00000459274 PKIGQ9Y2B9 76 aa4□□□□□ -1.77
RNU1-88P-201ENST00000459274 LINC00588Q9Y4M8 146 aa4□□□□□ -1.77
RNU1-88P-201ENST00000459274 IGLV5-45A0A087WSX0 123 aa3.99□□□□□ -1.77
RNU1-88P-201ENST00000459274 IBA57-AS1B1ANH7 110 aa3.99□□□□□ -1.77
RNU1-88P-201ENST00000459274 F8WDY8 70 aa3.99□□□□□ -1.77
RNU1-88P-201ENST00000459274 EREGO14944 169 aa3.99□□□□□ -1.77
RNU1-88P-201ENST00000459274 RPL24P83731 157 aaKnown RBP3.99□□□□□ -1.77
RNU1-88P-201ENST00000459274 TAL2Q16559 108 aa3.99□□□□□ -1.77
RNU1-88P-201ENST00000459274 C14orf177Q52M58 125 aa3.99□□□□□ -1.77
RNU1-88P-201ENST00000459274 Q6ZVH6 145 aa3.99□□□□□ -1.77
RNU1-88P-201ENST00000459274 ORAOV1Q8WV07 137 aa3.99□□□□□ -1.77
RNU1-88P-201ENST00000459274 PRR34Q9NV39 138 aa3.99□□□□□ -1.77
RNU1-88P-201ENST00000459274 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.98□□□□□ -1.77
RNU1-88P-201ENST00000459274 IGHV3OR16-9A0A0B4J2B5 98 aa3.98□□□□□ -1.77
RNU1-88P-201ENST00000459274 LINC00158P58513 81 aa3.98□□□□□ -1.77
RNU1-88P-201ENST00000459274 COX6A2Q02221 97 aa3.98□□□□□ -1.77
RNU1-88P-201ENST00000459274 BATFQ16520 125 aa3.98□□□□□ -1.77
RNU1-88P-201ENST00000459274 ANKRD39Q53RE8 183 aa3.98□□□□□ -1.77
RNU1-88P-201ENST00000459274 Q8IZM0 81 aa3.98□□□□□ -1.77
RNU1-88P-201ENST00000459274 HIGD1BQ9P298 99 aa3.98□□□□□ -1.77
RNU1-88P-201ENST00000459274 SMIM1B2RUZ4 78 aa3.97□□□□□ -1.77
RNU1-88P-201ENST00000459274 NDUFA1O15239 70 aa3.97□□□□□ -1.77
RNU1-88P-201ENST00000459274 LY6G6CO95867 125 aa3.97□□□□□ -1.77
RNU1-88P-201ENST00000459274 CTAG1AP78358 180 aa3.97□□□□□ -1.77
RNU1-88P-201ENST00000459274 HSD52Q0P140 79 aa3.97□□□□□ -1.77
RNU1-88P-201ENST00000459274 COX17Q14061 63 aa3.97□□□□□ -1.77
RNU1-88P-201ENST00000459274 LBHQ53QV2 105 aaPredicted RBP3.97□□□□□ -1.77
RNU1-88P-201ENST00000459274 CDPF1Q6NVV7 123 aa3.97□□□□□ -1.77
RNU1-88P-201ENST00000459274 ENHOQ6UWT2 76 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms