RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 DPH3Q96FX2 82 aa10.41□□□□□ -0.74
CD28-203ENST00000458610 IGIPA6NJ69 53 aa10.4□□□□□ -0.74
CD28-203ENST00000458610 HAMPP81172 84 aa10.4□□□□□ -0.74
CD28-203ENST00000458610 SCXQ7RTU7 201 aa10.4□□□□□ -0.74
CD28-203ENST00000458610 TOMM6Q96B49 74 aa10.4□□□□□ -0.74
CD28-203ENST00000458610 DNAH5Q8TE73 4624 aa10.4□□□□□ -0.74
CD28-203ENST00000458610 LINC01546A6NGU7 62 aa10.39□□□□□ -0.75
CD28-203ENST00000458610 SEC11AP67812 179 aa10.39□□□□□ -0.75
CD28-203ENST00000458610 Q5VSD8 79 aa10.39□□□□□ -0.75
CD28-203ENST00000458610 ERASQ7Z444 233 aa10.39□□□□□ -0.75
CD28-203ENST00000458610 CIRBP-AS1Q8TBR5 109 aa10.39□□□□□ -0.75
CD28-203ENST00000458610 TIMM17AQ99595 171 aa10.39□□□□□ -0.75
CD28-203ENST00000458610 IGHV3OR16-9A0A0B4J2B5 98 aa10.38□□□□□ -0.75
CD28-203ENST00000458610 F8WDY8 70 aa10.38□□□□□ -0.75
CD28-203ENST00000458610 PLA2G1BP04054 148 aaKnown RBP10.38□□□□□ -0.75
CD28-203ENST00000458610 SYCNQ0VAF6 134 aa10.38□□□□□ -0.75
CD28-203ENST00000458610 OR10D4PQ8NGN7 298 aa10.38□□□□□ -0.75
CD28-203ENST00000458610 C2orf48Q96LS8 159 aa10.38□□□□□ -0.75
CD28-203ENST00000458610 CARD19Q96LW7 228 aa10.38□□□□□ -0.75
CD28-203ENST00000458610 SCGB3A1Q96QR1 104 aa10.38□□□□□ -0.75
CD28-203ENST00000458610 AMELXQ99217 191 aa10.38□□□□□ -0.75
CD28-203ENST00000458610 KRTAP4-5Q9BYR2 181 aa10.38□□□□□ -0.75
CD28-203ENST00000458610 RAB5BP61020 215 aa10.37□□□□□ -0.75
CD28-203ENST00000458610 KRTAP17-1Q9BYP8 105 aa10.37□□□□□ -0.75
CD28-203ENST00000458610 TMA7Q9Y2S6 64 aaKnown RBP10.37□□□□□ -0.75
CD28-203ENST00000458610 IGLV4-69A0A075B6H9 119 aa10.36□□□□□ -0.75
CD28-203ENST00000458610 UBE2D1P51668 147 aa10.36□□□□□ -0.75
CD28-203ENST00000458610 LINC00242Q5T6M2 205 aa10.36□□□□□ -0.75
CD28-203ENST00000458610 CAMK2N2Q96S95 79 aa10.36□□□□□ -0.75
CD28-203ENST00000458610 LINC00474Q9P2X8 69 aa10.36□□□□□ -0.75
CD28-203ENST00000458610 A0A087WZ39 114 aa10.35□□□□□ -0.75
CD28-203ENST00000458610 LINC00614P0C842 121 aa10.35□□□□□ -0.75
CD28-203ENST00000458610 COX6A2Q02221 97 aa10.35□□□□□ -0.75
CD28-203ENST00000458610 SPAG11BQ08648 103 aa10.35□□□□□ -0.75
CD28-203ENST00000458610 LINC00528Q8N1L1 170 aa10.35□□□□□ -0.75
CD28-203ENST00000458610 LINC01561Q8N1V8 128 aa10.35□□□□□ -0.75
CD28-203ENST00000458610 LINC00526Q96FQ7 95 aa10.35□□□□□ -0.75
CD28-203ENST00000458610 CIRBPQ14011 172 aaKnown RBP10.34□□□□□ -0.75
CD28-203ENST00000458610 ORAOV1Q8WV07 137 aa10.34□□□□□ -0.75
CD28-203ENST00000458610 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.34□□□□□ -0.75
CD28-203ENST00000458610 APOBP04114 4563 aaKnown RBP10.34□□□□□ -0.75
CD28-203ENST00000458610 FAM19A3Q7Z5A8 133 aa10.33□□□□□ -0.76
CD28-203ENST00000458610 C18orf32Q8TCD1 76 aa10.33□□□□□ -0.76
CD28-203ENST00000458610 YPEL4Q96NS1 127 aa10.33□□□□□ -0.76
CD28-203ENST00000458610 HSPG2P98160 4391 aa10.33□□□□□ -0.76
CD28-203ENST00000458610 INAFM2P0DMQ5 153 aa10.32□□□□□ -0.76
CD28-203ENST00000458610 HERVK_113P63121 156 aa10.32□□□□□ -0.76
CD28-203ENST00000458610 RNF151Q2KHN1 245 aa10.32□□□□□ -0.76
CD28-203ENST00000458610 LINC00173Q6ZV60 143 aa10.32□□□□□ -0.76
CD28-203ENST00000458610 GEMIN7Q9H840 131 aaKnown RBP10.32□□□□□ -0.76
CD28-203ENST00000458610 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.31□□□□□ -0.76
CD28-203ENST00000458610 Q6ZRU5 148 aa10.31□□□□□ -0.76
CD28-203ENST00000458610 SPACA4Q8TDM5 124 aa10.31□□□□□ -0.76
CD28-203ENST00000458610 LOC107984640A0A0U1RRK4 108 aa10.3□□□□□ -0.76
CD28-203ENST00000458610 NDUFA1O15239 70 aa10.3□□□□□ -0.76
CD28-203ENST00000458610 MAJINQ3KP22 176 aa10.3□□□□□ -0.76
CD28-203ENST00000458610 ZC2HC1BQ5TFG8 222 aa10.3□□□□□ -0.76
CD28-203ENST00000458610 CBLN2Q8IUK8 224 aa10.3□□□□□ -0.76
CD28-203ENST00000458610 A0A087WYN8 130 aa10.29□□□□□ -0.76
CD28-203ENST00000458610 IGKV2-24A0A0C4DH68 120 aa10.29□□□□□ -0.76
CD28-203ENST00000458610 HBDP02042 147 aa10.29□□□□□ -0.76
CD28-203ENST00000458610 CHTF8P0CG12 524 aa10.29□□□□□ -0.76
CD28-203ENST00000458610 PMVKQ15126 192 aa10.29□□□□□ -0.76
CD28-203ENST00000458610 PACRGQ96M98 296 aaPredicted RBP10.29□□□□□ -0.76
CD28-203ENST00000458610 MRPL35Q9NZE8 188 aaKnown RBP10.29□□□□□ -0.76
CD28-203ENST00000458610 COLCA2A8K830 154 aa10.28□□□□□ -0.76
CD28-203ENST00000458610 PANO1I0J062 215 aa10.28□□□□□ -0.76
CD28-203ENST00000458610 PRSS2P07478 247 aa10.28□□□□□ -0.76
CD28-203ENST00000458610 CST9LQ9H4G1 147 aa10.28□□□□□ -0.76
CD28-203ENST00000458610 PLAC8Q9NZF1 115 aa10.28□□□□□ -0.76
CD28-203ENST00000458610 A0A096LNI7 61 aa10.27□□□□□ -0.77
CD28-203ENST00000458610 ATP5LO75964 103 aa10.27□□□□□ -0.77
CD28-203ENST00000458610 CHCHD1Q96BP2 118 aaKnown RBP10.27□□□□□ -0.77
CD28-203ENST00000458610 A0A0J9YXV3 536 aa10.26□□□□□ -0.77
CD28-203ENST00000458610 TINCRA0A1B0GVN0 87 aa10.26□□□□□ -0.77
CD28-203ENST00000458610 STPG4Q8N801 248 aa10.26□□□□□ -0.77
CD28-203ENST00000458610 LOC105371267A0A1B0GV96 52 aa10.25□□□□□ -0.77
CD28-203ENST00000458610 PTTG1IPP53801 180 aa10.25□□□□□ -0.77
CD28-203ENST00000458610 RPL37AP61513 92 aaKnown RBP10.25□□□□□ -0.77
CD28-203ENST00000458610 GAGE2BQ13066 116 aa10.25□□□□□ -0.77
CD28-203ENST00000458610 C6orf226Q5I0X4 101 aa10.25□□□□□ -0.77
CD28-203ENST00000458610 C7orf33Q8WU49 177 aa10.25□□□□□ -0.77
CD28-203ENST00000458610 URB1-AS1Q96HZ7 61 aa10.25□□□□□ -0.77
CD28-203ENST00000458610 S100A6P06703 90 aa10.24□□□□□ -0.77
CD28-203ENST00000458610 NDUFA6P56556 154 aa10.24□□□□□ -0.77
CD28-203ENST00000458610 CKS1BP61024 79 aa10.24□□□□□ -0.77
CD28-203ENST00000458610 KIAA0087Q14695 138 aa10.24□□□□□ -0.77
CD28-203ENST00000458610 LINC00469Q8N7U9 141 aa10.24□□□□□ -0.77
CD28-203ENST00000458610 CDKN2A-AS1Q9UH64 79 aa10.24□□□□□ -0.77
CD28-203ENST00000458610 TRBV30A0A0K0K1B3 111 aa10.23□□□□□ -0.77
CD28-203ENST00000458610 H3BRM9 83 aa10.23□□□□□ -0.77
CD28-203ENST00000458610 UNQ6190/PRO20217Q6UXQ8 127 aa10.23□□□□□ -0.77
CD28-203ENST00000458610 BAGE3Q86Y29 109 aa10.23□□□□□ -0.77
CD28-203ENST00000458610 Q8IZM0 81 aa10.23□□□□□ -0.77
CD28-203ENST00000458610 TOMM7Q9P0U1 55 aa10.23□□□□□ -0.77
CD28-203ENST00000458610 A0A096LNJ9 63 aa10.22□□□□□ -0.77
CD28-203ENST00000458610 TRGC2P03986 189 aa10.22□□□□□ -0.77
CD28-203ENST00000458610 TLX1NBP0CAT3 122 aa10.22□□□□□ -0.77
CD28-203ENST00000458610 RPL18AQ02543 176 aaKnown RBP10.22□□□□□ -0.77
CD28-203ENST00000458610 PDZD11Q5EBL8 140 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms