RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 GEMIN7Q9H840 131 aaKnown RBP6.21□□□□□ -1.42
VPS50-207ENST00000458530 ALMS1Q8TCU4 4167 aa6.21□□□□□ -1.42
VPS50-207ENST00000458530 PLECQ15149 4684 aaKnown RBP6.2□□□□□ -1.42
VPS50-207ENST00000458530 IGLV4-69A0A075B6H9 119 aa6.2□□□□□ -1.42
VPS50-207ENST00000458530 TRAV8-6A0A0B4J262 113 aa6.2□□□□□ -1.42
VPS50-207ENST00000458530 A0A1B0GUV1 79 aa6.2□□□□□ -1.42
VPS50-207ENST00000458530 CCL25O15444 150 aa6.2□□□□□ -1.42
VPS50-207ENST00000458530 DLEU1O43261 78 aa6.2□□□□□ -1.42
VPS50-207ENST00000458530 NMUP48645 174 aa6.2□□□□□ -1.42
VPS50-207ENST00000458530 NANOS2P60321 138 aaKnown RBP6.2□□□□□ -1.42
VPS50-207ENST00000458530 HERVK_113P63121 156 aa6.2□□□□□ -1.42
VPS50-207ENST00000458530 ANKRD39Q53RE8 183 aa6.2□□□□□ -1.42
VPS50-207ENST00000458530 CEMP1Q6PRD7 247 aaPredicted RBP6.2□□□□□ -1.42
VPS50-207ENST00000458530 STPG4Q8N801 248 aa6.2□□□□□ -1.42
VPS50-207ENST00000458530 OPRPNQ99935 248 aaPredicted RBP6.2□□□□□ -1.42
VPS50-207ENST00000458530 CDC42SE2Q9NRR3 84 aa6.2□□□□□ -1.42
VPS50-207ENST00000458530 RYR1P21817 5038 aa6.2□□□□□ -1.42
VPS50-207ENST00000458530 A0A096LPF7 62 aa6.19□□□□□ -1.42
VPS50-207ENST00000458530 E9PLD3 99 aa6.19□□□□□ -1.42
VPS50-207ENST00000458530 TMEM262E9PQX1 116 aa6.19□□□□□ -1.42
VPS50-207ENST00000458530 UBE2D1P51668 147 aa6.19□□□□□ -1.42
VPS50-207ENST00000458530 C14orf144Q96I85 54 aa6.19□□□□□ -1.42
VPS50-207ENST00000458530 A0A0J9YXV3 536 aa6.18□□□□□ -1.42
VPS50-207ENST00000458530 SIVA1O15304 175 aa6.18□□□□□ -1.42
VPS50-207ENST00000458530 ZNF22P17026 224 aaPredicted RBP6.18□□□□□ -1.42
VPS50-207ENST00000458530 RNASE13Q5GAN3 156 aaKnown RBP6.18□□□□□ -1.42
VPS50-207ENST00000458530 FAM19A3Q7Z5A8 133 aa6.18□□□□□ -1.42
VPS50-207ENST00000458530 LINC00469Q8N7U9 141 aa6.18□□□□□ -1.42
VPS50-207ENST00000458530 PLEKHB2Q96CS7 222 aa6.18□□□□□ -1.42
VPS50-207ENST00000458530 LGALS3P17931 250 aaKnown RBP6.17□□□□□ -1.42
VPS50-207ENST00000458530 BOD1L2Q8IYS8 172 aa6.17□□□□□ -1.42
VPS50-207ENST00000458530 FAM104AQ969W3 186 aa6.17□□□□□ -1.42
VPS50-207ENST00000458530 MRPS16Q9Y3D3 137 aaKnown RBP6.17□□□□□ -1.42
VPS50-207ENST00000458530 IGLV5-45A0A087WSX0 123 aa6.16□□□□□ -1.42
VPS50-207ENST00000458530 TRAV13-1A0A0B4J241 112 aa6.16□□□□□ -1.42
VPS50-207ENST00000458530 TMEM223A0PJW6 202 aa6.16□□□□□ -1.42
VPS50-207ENST00000458530 LINC00587B1AMM8 73 aa6.16□□□□□ -1.42
VPS50-207ENST00000458530 LEPROTO15243 131 aa6.16□□□□□ -1.42
VPS50-207ENST00000458530 RBX1P62877 108 aa6.16□□□□□ -1.42
VPS50-207ENST00000458530 SS18Q15532 418 aa6.16□□□□□ -1.42
VPS50-207ENST00000458530 HECTD4Q9Y4D8 3996 aa6.16□□□□□ -1.42
VPS50-207ENST00000458530 KMT2AQ03164 3969 aa6.15□□□□□ -1.42
VPS50-207ENST00000458530 M0R143 59 aa6.15□□□□□ -1.42
VPS50-207ENST00000458530 MPV17L2Q567V2 206 aa6.15□□□□□ -1.42
VPS50-207ENST00000458530 LCE1DQ5T752 114 aa6.15□□□□□ -1.42
VPS50-207ENST00000458530 LCE4AQ5TA78 99 aa6.15□□□□□ -1.42
VPS50-207ENST00000458530 LYPD5Q6UWN5 251 aa6.15□□□□□ -1.42
VPS50-207ENST00000458530 HIGD1BQ9P298 99 aa6.15□□□□□ -1.42
VPS50-207ENST00000458530 IGLV4-60A0A075B6I1 120 aa6.14□□□□□ -1.43
VPS50-207ENST00000458530 IGKV2D-26A0A0A0MRZ7 120 aa6.14□□□□□ -1.43
VPS50-207ENST00000458530 IGHV1-58A0A0C4DH39 117 aa6.14□□□□□ -1.43
VPS50-207ENST00000458530 MYMXA0A1B0GTQ4 84 aa6.14□□□□□ -1.43
VPS50-207ENST00000458530 ZNF815PA8K554 130 aa6.14□□□□□ -1.43
VPS50-207ENST00000458530 J3QQQ9 107 aa6.14□□□□□ -1.43
VPS50-207ENST00000458530 ANGP03950 147 aaKnown RBP6.14□□□□□ -1.43
VPS50-207ENST00000458530 TCTAP57738 103 aa6.14□□□□□ -1.43
VPS50-207ENST00000458530 LBHQ53QV2 105 aaPredicted RBP6.14□□□□□ -1.43
VPS50-207ENST00000458530 LINC00242Q5T6M2 205 aa6.14□□□□□ -1.43
VPS50-207ENST00000458530 KIAA1109Q2LD37 5005 aa6.14□□□□□ -1.43
VPS50-207ENST00000458530 LINC00959A0A1B0GUT2 108 aa6.13□□□□□ -1.43
VPS50-207ENST00000458530 CRPP02741 224 aa6.13□□□□□ -1.43
VPS50-207ENST00000458530 CCL18P55774 89 aa6.13□□□□□ -1.43
VPS50-207ENST00000458530 CTAG1AP78358 180 aa6.13□□□□□ -1.43
VPS50-207ENST00000458530 SCGB1D4Q6XE38 83 aa6.13□□□□□ -1.43
VPS50-207ENST00000458530 PCP2Q8IVA1 136 aa6.13□□□□□ -1.43
VPS50-207ENST00000458530 IGKV3OR2-268A0A0C4DH90 116 aa6.12□□□□□ -1.43
VPS50-207ENST00000458530 NUPR2A6NF83 97 aa6.12□□□□□ -1.43
VPS50-207ENST00000458530 IGHV3-30-3P0DP02 117 aa6.12□□□□□ -1.43
VPS50-207ENST00000458530 REG3AQ06141 175 aa6.12□□□□□ -1.43
VPS50-207ENST00000458530 HSD52Q0P140 79 aa6.12□□□□□ -1.43
VPS50-207ENST00000458530 TAL2Q16559 108 aa6.12□□□□□ -1.43
VPS50-207ENST00000458530 SFTA2Q6UW10 78 aa6.12□□□□□ -1.43
VPS50-207ENST00000458530 LINC01561Q8N1V8 128 aa6.12□□□□□ -1.43
VPS50-207ENST00000458530 CDKN2A-AS1Q9UH64 79 aa6.12□□□□□ -1.43
VPS50-207ENST00000458530 TRAV8-4A0A0B4J246 113 aa6.11□□□□□ -1.43
VPS50-207ENST00000458530 IGLL5B9A064 214 aa6.11□□□□□ -1.43
VPS50-207ENST00000458530 SPINK8P0C7L1 97 aa6.11□□□□□ -1.43
VPS50-207ENST00000458530 LINC00269Q8N2A0 174 aa6.11□□□□□ -1.43
VPS50-207ENST00000458530 LINC00476Q8WZB0 136 aa6.11□□□□□ -1.43
VPS50-207ENST00000458530 KLK5Q9Y337 293 aaPredicted RBP6.11□□□□□ -1.43
VPS50-207ENST00000458530 DNAH10Q8IVF4 4471 aa6.1□□□□□ -1.43
VPS50-207ENST00000458530 IGHV3-64A0A075B6Q5 118 aa6.1□□□□□ -1.43
VPS50-207ENST00000458530 A0A087WZ39 114 aa6.1□□□□□ -1.43
VPS50-207ENST00000458530 IGLV5-39A0A0G2JS06 123 aa6.1□□□□□ -1.43
VPS50-207ENST00000458530 SMIM1B2RUZ4 78 aa6.1□□□□□ -1.43
VPS50-207ENST00000458530 TMEM238C9JI98 176 aa6.1□□□□□ -1.43
VPS50-207ENST00000458530 MIAQ16674 131 aa6.1□□□□□ -1.43
VPS50-207ENST00000458530 ESRGQ1W209 222 aa6.1□□□□□ -1.43
VPS50-207ENST00000458530 LINC01556Q5JQF7 62 aa6.1□□□□□ -1.43
VPS50-207ENST00000458530 CD164L2Q6UWJ8 174 aa6.1□□□□□ -1.43
VPS50-207ENST00000458530 C2orf91Q6ZV80 131 aa6.1□□□□□ -1.43
VPS50-207ENST00000458530 IGHV3OR16-9A0A0B4J2B5 98 aa6.09□□□□□ -1.43
VPS50-207ENST00000458530 COX7A2LO14548 114 aa6.09□□□□□ -1.43
VPS50-207ENST00000458530 IGHV3-30P01768 117 aa6.09□□□□□ -1.43
VPS50-207ENST00000458530 IGHV3-33P01772 117 aa6.09□□□□□ -1.43
VPS50-207ENST00000458530 IGHV3-30-5P0DP03 117 aa6.09□□□□□ -1.43
VPS50-207ENST00000458530 GCSHP23434 173 aa6.09□□□□□ -1.43
VPS50-207ENST00000458530 HERV-K104P63124 156 aa6.09□□□□□ -1.43
VPS50-207ENST00000458530 COX6A2Q02221 97 aa6.09□□□□□ -1.43
VPS50-207ENST00000458530 CLPSL2Q6UWE3 100 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms