RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 XCL1P47992 114 aa6.57□□□□□ -1.36
ATG4A-206ENST00000457035 CD164L2Q6UWJ8 174 aa6.57□□□□□ -1.36
ATG4A-206ENST00000457035 NPSP0C0P6 89 aa6.56□□□□□ -1.36
ATG4A-206ENST00000457035 C14orf177Q52M58 125 aa6.56□□□□□ -1.36
ATG4A-206ENST00000457035 FA2HQ7L5A8 372 aa6.56□□□□□ -1.36
ATG4A-206ENST00000457035 TMEM141Q96I45 108 aa6.56□□□□□ -1.36
ATG4A-206ENST00000457035 AMELXQ99217 191 aa6.56□□□□□ -1.36
ATG4A-206ENST00000457035 HSPG2P98160 4391 aa6.55□□□□□ -1.36
ATG4A-206ENST00000457035 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.55□□□□□ -1.36
ATG4A-206ENST00000457035 A0A096LNJ9 63 aa6.55□□□□□ -1.36
ATG4A-206ENST00000457035 IGLV5-52A0A0A0MRZ9 124 aa6.55□□□□□ -1.36
ATG4A-206ENST00000457035 KRTAP10-1P60331 282 aa6.55□□□□□ -1.36
ATG4A-206ENST00000457035 ZC2HC1BQ5TFG8 222 aa6.55□□□□□ -1.36
ATG4A-206ENST00000457035 LINC00173Q6ZV60 143 aa6.55□□□□□ -1.36
ATG4A-206ENST00000457035 ERASQ7Z444 233 aa6.55□□□□□ -1.36
ATG4A-206ENST00000457035 C15orf56Q8N910 161 aa6.55□□□□□ -1.36
ATG4A-206ENST00000457035 TIMM17AQ99595 171 aa6.55□□□□□ -1.36
ATG4A-206ENST00000457035 AP5S1Q9NUS5 200 aa6.55□□□□□ -1.36
ATG4A-206ENST00000457035 LINC01549A6NIU2 74 aa6.54□□□□□ -1.36
ATG4A-206ENST00000457035 GCSHP23434 173 aa6.54□□□□□ -1.36
ATG4A-206ENST00000457035 RAB5BP61020 215 aa6.54□□□□□ -1.36
ATG4A-206ENST00000457035 CFAP161Q6P656 301 aa6.54□□□□□ -1.36
ATG4A-206ENST00000457035 SCGB3A1Q96QR1 104 aa6.54□□□□□ -1.36
ATG4A-206ENST00000457035 VCX2Q9H322 139 aa6.54□□□□□ -1.36
ATG4A-206ENST00000457035 IGHV3OR16-9A0A0B4J2B5 98 aa6.53□□□□□ -1.36
ATG4A-206ENST00000457035 IFITM10A6NMD0 228 aa6.53□□□□□ -1.36
ATG4A-206ENST00000457035 SLPIP03973 132 aa6.53□□□□□ -1.36
ATG4A-206ENST00000457035 KRTAP19-4Q3LI73 84 aa6.53□□□□□ -1.36
ATG4A-206ENST00000457035 LINC00242Q5T6M2 205 aa6.53□□□□□ -1.36
ATG4A-206ENST00000457035 TEX43Q6ZNM6 134 aa6.53□□□□□ -1.36
ATG4A-206ENST00000457035 ABCA13Q86UQ4 5058 aa6.53□□□□□ -1.36
ATG4A-206ENST00000457035 hDV102S1A0JD36 115 aa6.52□□□□□ -1.37
ATG4A-206ENST00000457035 S100A1P23297 94 aa6.52□□□□□ -1.37
ATG4A-206ENST00000457035 UBE2D1P51668 147 aa6.52□□□□□ -1.37
ATG4A-206ENST00000457035 COX6A2Q02221 97 aa6.52□□□□□ -1.37
ATG4A-206ENST00000457035 PMCHL1Q16048 86 aa6.52□□□□□ -1.37
ATG4A-206ENST00000457035 PAPPA-AS1Q5QFB9 102 aa6.52□□□□□ -1.37
ATG4A-206ENST00000457035 Q6ZN92 141 aa6.52□□□□□ -1.37
ATG4A-206ENST00000457035 FAM19A3Q7Z5A8 133 aa6.52□□□□□ -1.37
ATG4A-206ENST00000457035 C5orf38Q86SI9 138 aa6.52□□□□□ -1.37
ATG4A-206ENST00000457035 GVQW2A0A096LPI5 108 aaPredicted RBP6.51□□□□□ -1.37
ATG4A-206ENST00000457035 IGHV1-58A0A0C4DH39 117 aa6.51□□□□□ -1.37
ATG4A-206ENST00000457035 COX7A2LO14548 114 aa6.51□□□□□ -1.37
ATG4A-206ENST00000457035 ATP6V1G1O75348 118 aa6.51□□□□□ -1.37
ATG4A-206ENST00000457035 CDK2AP2O75956 126 aa6.51□□□□□ -1.37
ATG4A-206ENST00000457035 CNBPP62633 177 aaKnown RBP6.51□□□□□ -1.37
ATG4A-206ENST00000457035 LINC01620Q4KN68 170 aa6.51□□□□□ -1.37
ATG4A-206ENST00000457035 PDZD11Q5EBL8 140 aa6.51□□□□□ -1.37
ATG4A-206ENST00000457035 C9orf163Q8N9P6 203 aa6.51□□□□□ -1.37
ATG4A-206ENST00000457035 CHCHD1Q96BP2 118 aaKnown RBP6.51□□□□□ -1.37
ATG4A-206ENST00000457035 HBDP02042 147 aa6.5□□□□□ -1.37
ATG4A-206ENST00000457035 HIGD2BQ4VC39 106 aa6.5□□□□□ -1.37
ATG4A-206ENST00000457035 BAGE3Q86Y29 109 aa6.5□□□□□ -1.37
ATG4A-206ENST00000457035 C2orf88Q9BSF0 95 aa6.5□□□□□ -1.37
ATG4A-206ENST00000457035 FAM30AQ9NZY2 134 aa6.5□□□□□ -1.37
ATG4A-206ENST00000457035 FAT1Q14517 4588 aa6.5□□□□□ -1.37
ATG4A-206ENST00000457035 A0A087WZ39 114 aa6.49□□□□□ -1.37
ATG4A-206ENST00000457035 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.49□□□□□ -1.37
ATG4A-206ENST00000457035 MALP21145 153 aa6.49□□□□□ -1.37
ATG4A-206ENST00000457035 XGP55808 180 aa6.49□□□□□ -1.37
ATG4A-206ENST00000457035 LINC00310P59036 64 aa6.49□□□□□ -1.37
ATG4A-206ENST00000457035 LINC00526Q96FQ7 95 aa6.49□□□□□ -1.37
ATG4A-206ENST00000457035 CST9LQ9H4G1 147 aa6.49□□□□□ -1.37
ATG4A-206ENST00000457035 A0A0J9YXV3 536 aa6.48□□□□□ -1.37
ATG4A-206ENST00000457035 NUPR1O60356 82 aa6.48□□□□□ -1.37
ATG4A-206ENST00000457035 PMVKQ15126 192 aa6.48□□□□□ -1.37
ATG4A-206ENST00000457035 SDIM1Q6ZPB5 146 aa6.48□□□□□ -1.37
ATG4A-206ENST00000457035 Q6ZSA8 131 aa6.48□□□□□ -1.37
ATG4A-206ENST00000457035 IGHV3-64A0A075B6Q5 118 aa6.47□□□□□ -1.37
ATG4A-206ENST00000457035 ZNF561-AS1K7EIQ3 104 aa6.47□□□□□ -1.37
ATG4A-206ENST00000457035 HIST1H2BKO60814 126 aa6.47□□□□□ -1.37
ATG4A-206ENST00000457035 SERF1AO75920 110 aa6.47□□□□□ -1.37
ATG4A-206ENST00000457035 ATP5LO75964 103 aa6.47□□□□□ -1.37
ATG4A-206ENST00000457035 APOMO95445 188 aa6.47□□□□□ -1.37
ATG4A-206ENST00000457035 HIST1H2BJP06899 126 aa6.47□□□□□ -1.37
ATG4A-206ENST00000457035 HIST1H2BOP23527 126 aa6.47□□□□□ -1.37
ATG4A-206ENST00000457035 HIST1H2BBP33778 126 aa6.47□□□□□ -1.37
ATG4A-206ENST00000457035 HIST1H2BDP58876 126 aa6.47□□□□□ -1.37
ATG4A-206ENST00000457035 HIST1H2BCP62807 126 aa6.47□□□□□ -1.37
ATG4A-206ENST00000457035 SEC11AP67812 179 aa6.47□□□□□ -1.37
ATG4A-206ENST00000457035 HIST2H2BEQ16778 126 aa6.47□□□□□ -1.37
ATG4A-206ENST00000457035 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.47□□□□□ -1.37
ATG4A-206ENST00000457035 LINC01561Q8N1V8 128 aa6.47□□□□□ -1.37
ATG4A-206ENST00000457035 FAM19A2Q8N3H0 131 aa6.47□□□□□ -1.37
ATG4A-206ENST00000457035 HIST1H2BHQ93079 126 aa6.47□□□□□ -1.37
ATG4A-206ENST00000457035 HIST1H2BNQ99877 126 aa6.47□□□□□ -1.37
ATG4A-206ENST00000457035 HIST1H2BMQ99879 126 aa6.47□□□□□ -1.37
ATG4A-206ENST00000457035 IGLV4-69A0A075B6H9 119 aa6.46□□□□□ -1.38
ATG4A-206ENST00000457035 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.46□□□□□ -1.38
ATG4A-206ENST00000457035 TINCRA0A1B0GVN0 87 aa6.46□□□□□ -1.38
ATG4A-206ENST00000457035 HSBP1O75506 76 aa6.46□□□□□ -1.38
ATG4A-206ENST00000457035 HERVK_113P63121 156 aa6.46□□□□□ -1.38
ATG4A-206ENST00000457035 KIAA0087Q14695 138 aa6.46□□□□□ -1.38
ATG4A-206ENST00000457035 Q8N1X5 172 aa6.46□□□□□ -1.38
ATG4A-206ENST00000457035 CDKN2A-AS1Q9UH64 79 aa6.46□□□□□ -1.38
ATG4A-206ENST00000457035 IGLV5-45A0A087WSX0 123 aa6.45□□□□□ -1.38
ATG4A-206ENST00000457035 OR10D4PQ8NGN7 298 aa6.45□□□□□ -1.38
ATG4A-206ENST00000457035 ORAOV1Q8WV07 137 aa6.45□□□□□ -1.38
ATG4A-206ENST00000457035 C2orf48Q96LS8 159 aa6.45□□□□□ -1.38
ATG4A-206ENST00000457035 GEMIN7Q9H840 131 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 248 ms