RNA–Protein interactions for RNA: ENST00000455629.5

CCDC144B-204, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best)

Gene CCDC144B, Length 946 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-204ENST00000455629 LINC00269Q8N2A0 174 aa11.32□□□□□ -0.6
CCDC144B-204ENST00000455629 OR5A1Q8NGJ0 315 aa11.32□□□□□ -0.6
CCDC144B-204ENST00000455629 SPANXA1Q9NS26 97 aa11.32□□□□□ -0.6
CCDC144B-204ENST00000455629 CSDC2Q9Y534 153 aaKnown RBP11.32□□□□□ -0.6
CCDC144B-204ENST00000455629 PKHD1L1Q86WI1 4243 aa11.32□□□□□ -0.6
CCDC144B-204ENST00000455629 CHCHD1Q96BP2 118 aaKnown RBP11.31□□□□□ -0.6
CCDC144B-204ENST00000455629 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.31□□□□□ -0.6
CCDC144B-204ENST00000455629 C1orf196B1AJZ1 125 aa11.3□□□□□ -0.6
CCDC144B-204ENST00000455629 HNRNPA3P51991 378 aaKnown RBP11.3□□□□□ -0.6
CCDC144B-204ENST00000455629 CLPSL2Q6UWE3 100 aa11.3□□□□□ -0.6
CCDC144B-204ENST00000455629 SDIM1Q6ZPB5 146 aa11.3□□□□□ -0.6
CCDC144B-204ENST00000455629 TOMM6Q96B49 74 aa11.3□□□□□ -0.6
CCDC144B-204ENST00000455629 CDC42SE2Q9NRR3 84 aa11.3□□□□□ -0.6
CCDC144B-204ENST00000455629 PYGO1Q9Y3Y4 419 aa11.3□□□□□ -0.6
CCDC144B-204ENST00000455629 A0A096LNJ9 63 aa11.29□□□□□ -0.6
CCDC144B-204ENST00000455629 LINC00310P59036 64 aa11.29□□□□□ -0.6
CCDC144B-204ENST00000455629 REG3AQ06141 175 aa11.29□□□□□ -0.6
CCDC144B-204ENST00000455629 ZNF664Q8N3J9 261 aa11.29□□□□□ -0.6
CCDC144B-204ENST00000455629 FAM104AQ969W3 186 aa11.29□□□□□ -0.6
CCDC144B-204ENST00000455629 SERF1AO75920 110 aa11.28□□□□□ -0.6
CCDC144B-204ENST00000455629 CNBPP62633 177 aaKnown RBP11.28□□□□□ -0.6
CCDC144B-204ENST00000455629 PMCHL1Q16048 86 aa11.28□□□□□ -0.6
CCDC144B-204ENST00000455629 Q6ZUT4 128 aa11.28□□□□□ -0.6
CCDC144B-204ENST00000455629 OPRPNQ99935 248 aaPredicted RBP11.28□□□□□ -0.6
CCDC144B-204ENST00000455629 UBR4Q5T4S7 5183 aa11.28□□□□□ -0.6
CCDC144B-204ENST00000455629 TRAV8-4A0A0B4J246 113 aa11.27□□□□□ -0.61
CCDC144B-204ENST00000455629 LINC01549A6NIU2 74 aa11.27□□□□□ -0.61
CCDC144B-204ENST00000455629 IGIPA6NJ69 53 aa11.27□□□□□ -0.61
CCDC144B-204ENST00000455629 MRPS36P82909 103 aaKnown RBP11.27□□□□□ -0.61
CCDC144B-204ENST00000455629 IGLV4-3A0A075B6K6 122 aa11.26□□□□□ -0.61
CCDC144B-204ENST00000455629 PANO1I0J062 215 aa11.26□□□□□ -0.61
CCDC144B-204ENST00000455629 HSBP1O75506 76 aa11.26□□□□□ -0.61
CCDC144B-204ENST00000455629 HBDP02042 147 aa11.26□□□□□ -0.61
CCDC144B-204ENST00000455629 CIRBPQ14011 172 aaKnown RBP11.26□□□□□ -0.61
CCDC144B-204ENST00000455629 RNASE13Q5GAN3 156 aaKnown RBP11.26□□□□□ -0.61
CCDC144B-204ENST00000455629 SCGB3A1Q96QR1 104 aa11.26□□□□□ -0.61
CCDC144B-204ENST00000455629 IGLV10-54A0A075B6I4 117 aa11.25□□□□□ -0.61
CCDC144B-204ENST00000455629 IGKV3OR2-268A0A0C4DH90 116 aa11.25□□□□□ -0.61
CCDC144B-204ENST00000455629 hDV102S1A0JD36 115 aa11.25□□□□□ -0.61
CCDC144B-204ENST00000455629 NUPR1O60356 82 aa11.25□□□□□ -0.61
CCDC144B-204ENST00000455629 NPSP0C0P6 89 aa11.25□□□□□ -0.61
CCDC144B-204ENST00000455629 Q6ZRU5 148 aa11.25□□□□□ -0.61
CCDC144B-204ENST00000455629 ERASQ7Z444 233 aa11.25□□□□□ -0.61
CCDC144B-204ENST00000455629 TIMM17AQ99595 171 aa11.25□□□□□ -0.61
CCDC144B-204ENST00000455629 PDZD11Q5EBL8 140 aa11.24□□□□□ -0.61
CCDC144B-204ENST00000455629 TMEM141Q96I45 108 aa11.24□□□□□ -0.61
CCDC144B-204ENST00000455629 IGHV3-64A0A075B6Q5 118 aa11.23□□□□□ -0.61
CCDC144B-204ENST00000455629 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.23□□□□□ -0.61
CCDC144B-204ENST00000455629 FAM19A2Q8N3H0 131 aa11.23□□□□□ -0.61
CCDC144B-204ENST00000455629 LINC00959A0A1B0GUT2 108 aa11.22□□□□□ -0.61
CCDC144B-204ENST00000455629 MT1HL1P0DM35 61 aa11.22□□□□□ -0.61
CCDC144B-204ENST00000455629 NDUFA6P56556 154 aa11.22□□□□□ -0.61
CCDC144B-204ENST00000455629 COA6Q5JTJ3 125 aaKnown RBP11.22□□□□□ -0.61
CCDC144B-204ENST00000455629 Q6ZN92 141 aa11.21□□□□□ -0.61
CCDC144B-204ENST00000455629 LINC00173Q6ZV60 143 aa11.21□□□□□ -0.61
CCDC144B-204ENST00000455629 DPH3Q96FX2 82 aa11.21□□□□□ -0.61
CCDC144B-204ENST00000455629 AMELXQ99217 191 aa11.21□□□□□ -0.61
CCDC144B-204ENST00000455629 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.2□□□□□ -0.62
CCDC144B-204ENST00000455629 PAPPA-AS1Q5QFB9 102 aa11.2□□□□□ -0.62
CCDC144B-204ENST00000455629 ZC2HC1BQ5TFG8 222 aa11.2□□□□□ -0.62
CCDC144B-204ENST00000455629 TEX43Q6ZNM6 134 aa11.2□□□□□ -0.62
CCDC144B-204ENST00000455629 VCX2Q9H322 139 aa11.2□□□□□ -0.62
CCDC144B-204ENST00000455629 TRAV13-1A0A0B4J241 112 aa11.19□□□□□ -0.62
CCDC144B-204ENST00000455629 IFITM10A6NMD0 228 aa11.19□□□□□ -0.62
CCDC144B-204ENST00000455629 ATP5LO75964 103 aa11.19□□□□□ -0.62
CCDC144B-204ENST00000455629 SS18Q15532 418 aa11.19□□□□□ -0.62
CCDC144B-204ENST00000455629 CHCHD10Q8WYQ3 142 aaPredicted RBP11.19□□□□□ -0.62
CCDC144B-204ENST00000455629 A0A087WYN8 130 aa11.18□□□□□ -0.62
CCDC144B-204ENST00000455629 CCL25O15444 150 aa11.18□□□□□ -0.62
CCDC144B-204ENST00000455629 SLPIP03973 132 aa11.18□□□□□ -0.62
CCDC144B-204ENST00000455629 SPACA4Q8TDM5 124 aa11.18□□□□□ -0.62
CCDC144B-204ENST00000455629 C2orf88Q9BSF0 95 aa11.17□□□□□ -0.62
CCDC144B-204ENST00000455629 GAGE12HA6NDE8 117 aa11.16□□□□□ -0.62
CCDC144B-204ENST00000455629 CHTF8P0CG12 524 aa11.16□□□□□ -0.62
CCDC144B-204ENST00000455629 XCL1P47992 114 aa11.16□□□□□ -0.62
CCDC144B-204ENST00000455629 UBE2D1P51668 147 aa11.16□□□□□ -0.62
CCDC144B-204ENST00000455629 CFAP161Q6P656 301 aa11.16□□□□□ -0.62
CCDC144B-204ENST00000455629 PLAC8Q9NZF1 115 aa11.16□□□□□ -0.62
CCDC144B-204ENST00000455629 LEPROTL1O95214 131 aa11.15□□□□□ -0.62
CCDC144B-204ENST00000455629 PMVKQ15126 192 aa11.15□□□□□ -0.62
CCDC144B-204ENST00000455629 IFI27L1Q96BM0 104 aa11.15□□□□□ -0.62
CCDC144B-204ENST00000455629 CST9LQ9H4G1 147 aa11.15□□□□□ -0.62
CCDC144B-204ENST00000455629 FABP4P15090 132 aa11.14□□□□□ -0.63
CCDC144B-204ENST00000455629 FOXI1Q12951 378 aa11.14□□□□□ -0.63
CCDC144B-204ENST00000455629 CD164L2Q6UWJ8 174 aa11.14□□□□□ -0.63
CCDC144B-204ENST00000455629 C7orf33Q8WU49 177 aa11.14□□□□□ -0.63
CCDC144B-204ENST00000455629 LINC00242Q5T6M2 205 aa11.13□□□□□ -0.63
CCDC144B-204ENST00000455629 C15orf56Q8N910 161 aa11.13□□□□□ -0.63
CCDC144B-204ENST00000455629 HSPB8Q9UJY1 196 aa11.13□□□□□ -0.63
CCDC144B-204ENST00000455629 FAM19A3Q7Z5A8 133 aa11.12□□□□□ -0.63
CCDC144B-204ENST00000455629 S100A6P06703 90 aa11.11□□□□□ -0.63
CCDC144B-204ENST00000455629 COX6A2Q02221 97 aa11.11□□□□□ -0.63
CCDC144B-204ENST00000455629 A0A0J9YXV3 536 aa11.1□□□□□ -0.63
CCDC144B-204ENST00000455629 PACRGQ96M98 296 aaPredicted RBP11.1□□□□□ -0.63
CCDC144B-204ENST00000455629 TRAV12-1A0A0B4J245 112 aa11.09□□□□□ -0.63
CCDC144B-204ENST00000455629 IGHV3OR16-9A0A0B4J2B5 98 aa11.09□□□□□ -0.63
CCDC144B-204ENST00000455629 SEC11AP67812 179 aa11.09□□□□□ -0.63
CCDC144B-204ENST00000455629 TINCRA0A1B0GVN0 87 aa11.08□□□□□ -0.64
CCDC144B-204ENST00000455629 COX7A2LO14548 114 aa11.08□□□□□ -0.64
CCDC144B-204ENST00000455629 MAJINQ3KP22 176 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms