RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 PPP1R2P9O14990 202 aa4.92□□□□□ -1.62
NIF3L1-209ENST00000454952 TCAPO15273 167 aa4.92□□□□□ -1.62
NIF3L1-209ENST00000454952 RPL18AQ02543 176 aaKnown RBP4.92□□□□□ -1.62
NIF3L1-209ENST00000454952 C9orf116Q5BN46 136 aaPredicted RBP4.92□□□□□ -1.62
NIF3L1-209ENST00000454952 C1orf137Q5JT78 98 aa4.92□□□□□ -1.62
NIF3L1-209ENST00000454952 OR10D4PQ8NGN7 298 aa4.92□□□□□ -1.62
NIF3L1-209ENST00000454952 IMMP2LQ96T52 175 aa4.92□□□□□ -1.62
NIF3L1-209ENST00000454952 A0A1W2PNN7 141 aa4.91□□□□□ -1.62
NIF3L1-209ENST00000454952 HIGD1CA8MV81 97 aa4.91□□□□□ -1.62
NIF3L1-209ENST00000454952 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.91□□□□□ -1.62
NIF3L1-209ENST00000454952 SPAG11BQ08648 103 aa4.91□□□□□ -1.62
NIF3L1-209ENST00000454952 TIMM21Q9BVV7 248 aa4.91□□□□□ -1.62
NIF3L1-209ENST00000454952 IGLV1-50A0A075B6I6 118 aa4.9□□□□□ -1.63
NIF3L1-209ENST00000454952 TRAV13-1A0A0B4J241 112 aa4.9□□□□□ -1.63
NIF3L1-209ENST00000454952 IGLV7-43P04211 117 aa4.9□□□□□ -1.63
NIF3L1-209ENST00000454952 RAB4AP20338 218 aa4.9□□□□□ -1.63
NIF3L1-209ENST00000454952 SUMO2P61956 95 aaKnown RBP4.9□□□□□ -1.63
NIF3L1-209ENST00000454952 BLOC1S1P78537 153 aa4.9□□□□□ -1.63
NIF3L1-209ENST00000454952 RIGQ13278 110 aa4.9□□□□□ -1.63
NIF3L1-209ENST00000454952 TMEM241Q24JQ0 296 aa4.9□□□□□ -1.63
NIF3L1-209ENST00000454952 KRTAP3-1Q9BYR8 98 aa4.9□□□□□ -1.63
NIF3L1-209ENST00000454952 MRPL35Q9NZE8 188 aaKnown RBP4.9□□□□□ -1.63
NIF3L1-209ENST00000454952 UBE2D4Q9Y2X8 147 aa4.9□□□□□ -1.63
NIF3L1-209ENST00000454952 A0A087WZ39 114 aa4.89□□□□□ -1.63
NIF3L1-209ENST00000454952 A0A0U1RQV1 116 aa4.89□□□□□ -1.63
NIF3L1-209ENST00000454952 NDUFA1O15239 70 aa4.89□□□□□ -1.63
NIF3L1-209ENST00000454952 RPL13AP40429 203 aaKnown RBP4.89□□□□□ -1.63
NIF3L1-209ENST00000454952 C5orf38Q86SI9 138 aa4.89□□□□□ -1.63
NIF3L1-209ENST00000454952 AMN1Q8IY45 258 aa4.89□□□□□ -1.63
NIF3L1-209ENST00000454952 TCTE3Q8IZS6 198 aa4.89□□□□□ -1.63
NIF3L1-209ENST00000454952 OSTCQ9NRP0 149 aa4.89□□□□□ -1.63
NIF3L1-209ENST00000454952 RNF213Q63HN8 5207 aa4.88□□□□□ -1.63
NIF3L1-209ENST00000454952 LINC00862A6NCI5 91 aa4.88□□□□□ -1.63
NIF3L1-209ENST00000454952 H0Y9J4 135 aa4.88□□□□□ -1.63
NIF3L1-209ENST00000454952 TLX1NBP0CAT3 122 aa4.88□□□□□ -1.63
NIF3L1-209ENST00000454952 UBE2D1P51668 147 aa4.88□□□□□ -1.63
NIF3L1-209ENST00000454952 CEBPGP53567 150 aa4.88□□□□□ -1.63
NIF3L1-209ENST00000454952 PHF5AQ7RTV0 110 aaKnown RBP4.88□□□□□ -1.63
NIF3L1-209ENST00000454952 ORAOV1Q8WV07 137 aa4.88□□□□□ -1.63
NIF3L1-209ENST00000454952 SMIM7Q9BQ49 75 aa4.88□□□□□ -1.63
NIF3L1-209ENST00000454952 C20orf78Q9BR46 151 aa4.88□□□□□ -1.63
NIF3L1-209ENST00000454952 SPANXA1Q9NS26 97 aa4.88□□□□□ -1.63
NIF3L1-209ENST00000454952 A0A1B0GW15 77 aa4.87□□□□□ -1.63
NIF3L1-209ENST00000454952 RPL32P62910 135 aaKnown RBP4.87□□□□□ -1.63
NIF3L1-209ENST00000454952 RNASE13Q5GAN3 156 aaKnown RBP4.87□□□□□ -1.63
NIF3L1-209ENST00000454952 Q6ZUT4 128 aa4.87□□□□□ -1.63
NIF3L1-209ENST00000454952 LINC01551Q86U37 167 aa4.87□□□□□ -1.63
NIF3L1-209ENST00000454952 PRR26Q8N8Z3 221 aa4.87□□□□□ -1.63
NIF3L1-209ENST00000454952 NRACQ8N912 160 aa4.87□□□□□ -1.63
NIF3L1-209ENST00000454952 OPRPNQ99935 248 aaPredicted RBP4.87□□□□□ -1.63
NIF3L1-209ENST00000454952 NAT8BQ9UHF3 227 aa4.87□□□□□ -1.63
NIF3L1-209ENST00000454952 TGIF2-C20orf24A0A0A6YYL0 155 aa4.86□□□□□ -1.63
NIF3L1-209ENST00000454952 IGHV3OR16-9A0A0B4J2B5 98 aa4.86□□□□□ -1.63
NIF3L1-209ENST00000454952 ZNF727A8MUV8 499 aa4.86□□□□□ -1.63
NIF3L1-209ENST00000454952 UBE2BP63146 152 aa4.86□□□□□ -1.63
NIF3L1-209ENST00000454952 HBBP68871 147 aa4.86□□□□□ -1.63
NIF3L1-209ENST00000454952 MRPS36P82909 103 aaKnown RBP4.86□□□□□ -1.63
NIF3L1-209ENST00000454952 EIF5A2Q9GZV4 153 aaKnown RBP4.86□□□□□ -1.63
NIF3L1-209ENST00000454952 TRBV24-1A0A075B6N3 115 aa4.85□□□□□ -1.63
NIF3L1-209ENST00000454952 SMKR1H3BMG3 65 aa4.85□□□□□ -1.63
NIF3L1-209ENST00000454952 TRIAP1O43715 76 aa4.85□□□□□ -1.63
NIF3L1-209ENST00000454952 S100A8P05109 93 aa4.85□□□□□ -1.63
NIF3L1-209ENST00000454952 CKS2P33552 79 aa4.85□□□□□ -1.63
NIF3L1-209ENST00000454952 FAM104BQ5XKR9 115 aa4.85□□□□□ -1.63
NIF3L1-209ENST00000454952 FAM19A5Q7Z5A7 132 aaPredicted RBP4.85□□□□□ -1.63
NIF3L1-209ENST00000454952 SMDT1Q9H4I9 107 aa4.85□□□□□ -1.63
NIF3L1-209ENST00000454952 CARHSP1Q9Y2V2 147 aaKnown RBP4.85□□□□□ -1.63
NIF3L1-209ENST00000454952 TRBV30A0A0K0K1B3 111 aa4.84□□□□□ -1.63
NIF3L1-209ENST00000454952 IFITM10A6NMD0 228 aa4.84□□□□□ -1.63
NIF3L1-209ENST00000454952 F8W036 122 aa4.84□□□□□ -1.63
NIF3L1-209ENST00000454952 M0QXV9 152 aa4.84□□□□□ -1.63
NIF3L1-209ENST00000454952 TNFRSF6BO95407 300 aa4.84□□□□□ -1.63
NIF3L1-209ENST00000454952 PRR4Q16378 134 aa4.84□□□□□ -1.63
NIF3L1-209ENST00000454952 MRPL51Q4U2R6 128 aaKnown RBP4.84□□□□□ -1.63
NIF3L1-209ENST00000454952 GAGE2EQ4V326 116 aa4.84□□□□□ -1.63
NIF3L1-209ENST00000454952 FAM74A3Q4VXF1 159 aa4.84□□□□□ -1.63
NIF3L1-209ENST00000454952 SMIM2Q9BVW6 85 aa4.84□□□□□ -1.63
NIF3L1-209ENST00000454952 GAGE2DQ9UEU5 116 aa4.84□□□□□ -1.63
NIF3L1-209ENST00000454952 V9GYV3 84 aa4.84□□□□□ -1.63
NIF3L1-209ENST00000454952 FAM168BA1KXE4 195 aa4.83□□□□□ -1.64
NIF3L1-209ENST00000454952 NDUFC2-KCTD14E9PQ53 114 aa4.83□□□□□ -1.64
NIF3L1-209ENST00000454952 PPBPP02775 128 aa4.83□□□□□ -1.64
NIF3L1-209ENST00000454952 IFI27P40305 119 aaPredicted RBP4.83□□□□□ -1.64
NIF3L1-209ENST00000454952 ALKAL2Q6UX46 152 aa4.83□□□□□ -1.64
NIF3L1-209ENST00000454952 UNQ6190/PRO20217Q6UXQ8 127 aa4.83□□□□□ -1.64
NIF3L1-209ENST00000454952 PACRGQ96M98 296 aaPredicted RBP4.83□□□□□ -1.64
NIF3L1-209ENST00000454952 C6orf48Q9UBA6 75 aa4.83□□□□□ -1.64
NIF3L1-209ENST00000454952 NUPR1O60356 82 aa4.82□□□□□ -1.64
NIF3L1-209ENST00000454952 KRTAP1-4P0C5Y4 121 aa4.82□□□□□ -1.64
NIF3L1-209ENST00000454952 RAB5AP20339 215 aa4.82□□□□□ -1.64
NIF3L1-209ENST00000454952 RPL39P62891 51 aaKnown RBP4.82□□□□□ -1.64
NIF3L1-209ENST00000454952 C10orf25Q5T742 122 aa4.82□□□□□ -1.64
NIF3L1-209ENST00000454952 LINC01561Q8N1V8 128 aa4.82□□□□□ -1.64
NIF3L1-209ENST00000454952 KRTAP9-8Q9BYQ0 159 aa4.82□□□□□ -1.64
NIF3L1-209ENST00000454952 SMIM27A0A1W2PRY6 76 aa4.81□□□□□ -1.64
NIF3L1-209ENST00000454952 PRSS2P07478 247 aa4.81□□□□□ -1.64
NIF3L1-209ENST00000454952 SRP19P09132 144 aaKnown RBP4.81□□□□□ -1.64
NIF3L1-209ENST00000454952 LBHQ53QV2 105 aaPredicted RBP4.81□□□□□ -1.64
NIF3L1-209ENST00000454952 AKAP14Q86UN6 197 aa4.81□□□□□ -1.64
NIF3L1-209ENST00000454952 C2orf88Q9BSF0 95 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms