RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 TMEM243Q9BU79 118 aa11.19□□□□□ -0.62
TRA2B-205ENST00000453386 ZFYVE26Q68DK2 2539 aa11.18□□□□□ -0.62
TRA2B-205ENST00000453386 TRBV7-7A0A0K0K1E9 115 aa11.18□□□□□ -0.62
TRA2B-205ENST00000453386 TRACP01848 142 aa11.18□□□□□ -0.62
TRA2B-205ENST00000453386 IL17DQ8TAD2 202 aa11.18□□□□□ -0.62
TRA2B-205ENST00000453386 Q9HAA7 133 aa11.17□□□□□ -0.62
TRA2B-205ENST00000453386 TRGV2A0A075B6R0 118 aa11.17□□□□□ -0.62
TRA2B-205ENST00000453386 LOC100131303A0A0U1RQF7 123 aa11.16□□□□□ -0.62
TRA2B-205ENST00000453386 HIST2H2BCQ6DN03 193 aa11.16□□□□□ -0.62
TRA2B-205ENST00000453386 MIR7-3HGQ8N6C7 128 aa11.16□□□□□ -0.62
TRA2B-205ENST00000453386 FAM236AA0A1B0GUQ0 79 aa11.16□□□□□ -0.62
TRA2B-205ENST00000453386 FAM236BA0A1B0GV22 79 aa11.16□□□□□ -0.62
TRA2B-205ENST00000453386 CRPP02741 224 aa11.16□□□□□ -0.62
TRA2B-205ENST00000453386 SMCR5Q8TEV8 140 aa11.16□□□□□ -0.62
TRA2B-205ENST00000453386 TRAV13-2A0A0B4J235 113 aa11.15□□□□□ -0.62
TRA2B-205ENST00000453386 KRTAP10-9P60411 292 aa11.15□□□□□ -0.62
TRA2B-205ENST00000453386 NF1P21359 2839 aa11.15□□□□□ -0.63
TRA2B-205ENST00000453386 COX7B2Q8TF08 81 aa11.14□□□□□ -0.63
TRA2B-205ENST00000453386 ZNF462Q96JM2 2506 aa11.14□□□□□ -0.63
TRA2B-205ENST00000453386 TRAV25A0A0B4J276 109 aa11.14□□□□□ -0.63
TRA2B-205ENST00000453386 LINC00158P58513 81 aa11.14□□□□□ -0.63
TRA2B-205ENST00000453386 C3orf56Q8N813 242 aa11.14□□□□□ -0.63
TRA2B-205ENST00000453386 SND1-IT1Q9HBX3 110 aa11.13□□□□□ -0.63
TRA2B-205ENST00000453386 GAGE2AQ6NT46 116 aa11.13□□□□□ -0.63
TRA2B-205ENST00000453386 NIPBLQ6KC79 2804 aaeCLIP11.13□□□□□ -0.635e-6■□□□□ 10.2
TRA2B-205ENST00000453386 CCL24O00175 119 aa11.13□□□□□ -0.63
TRA2B-205ENST00000453386 LINC00643Q86TS7 51 aa11.13□□□□□ -0.63
TRA2B-205ENST00000453386 LINC00337Q8N6G1 96 aa11.13□□□□□ -0.63
TRA2B-205ENST00000453386 C22orf24Q9Y442 160 aa11.12□□□□□ -0.63
TRA2B-205ENST00000453386 CR1P17927 2039 aa11.11□□□□□ -0.63
TRA2B-205ENST00000453386 TRGV4A0A0C4DH28 118 aa11.11□□□□□ -0.63
TRA2B-205ENST00000453386 RPL35AP18077 110 aaKnown RBP11.11□□□□□ -0.63
TRA2B-205ENST00000453386 PF4P02776 101 aa11.11□□□□□ -0.63
TRA2B-205ENST00000453386 PRB1P04280 392 aa11.11□□□□□ -0.63
TRA2B-205ENST00000453386 MALP21145 153 aa11.11□□□□□ -0.63
TRA2B-205ENST00000453386 RPL28P46779 137 aaKnown RBP11.11□□□□□ -0.63
TRA2B-205ENST00000453386 IMUPQ9GZP8 106 aa11.11□□□□□ -0.63
TRA2B-205ENST00000453386 WFDC10AQ9H1F0 79 aa11.11□□□□□ -0.63
TRA2B-205ENST00000453386 IGKV2-28A0A075B6P5 120 aa11.1□□□□□ -0.63
TRA2B-205ENST00000453386 DNAL4O96015 105 aa11.1□□□□□ -0.63
TRA2B-205ENST00000453386 IGKV2D-28P01615 120 aa11.1□□□□□ -0.63
TRA2B-205ENST00000453386 PLA2G2AP14555 144 aa11.1□□□□□ -0.63
TRA2B-205ENST00000453386 SMIM20Q8N5G0 67 aa11.1□□□□□ -0.63
TRA2B-205ENST00000453386 CCDC168Q8NDH2 2452 aa11.1□□□□□ -0.63
TRA2B-205ENST00000453386 INAFM2P0DMQ5 153 aa11.1□□□□□ -0.63
TRA2B-205ENST00000453386 PFN2P35080 140 aa11.1□□□□□ -0.63
TRA2B-205ENST00000453386 IGLV4-60A0A075B6I1 120 aa11.09□□□□□ -0.63
TRA2B-205ENST00000453386 FAM222AQ5U5X8 452 aa11.09□□□□□ -0.63
TRA2B-205ENST00000453386 SMIM11BQ8TCY0 68 aa11.09□□□□□ -0.63
TRA2B-205ENST00000453386 GIG44P09565 113 aaPredicted RBP11.08□□□□□ -0.64
TRA2B-205ENST00000453386 DEFB113Q30KQ7 82 aa11.08□□□□□ -0.64
TRA2B-205ENST00000453386 C5orf38Q86SI9 138 aa11.08□□□□□ -0.64
TRA2B-205ENST00000453386 C16orf74Q96GX8 76 aa11.08□□□□□ -0.64
TRA2B-205ENST00000453386 A0A087WYN8 130 aa11.07□□□□□ -0.64
TRA2B-205ENST00000453386 SETXQ7Z333 2677 aaKnown RBP11.07□□□□□ -0.64
TRA2B-205ENST00000453386 CCL18P55774 89 aa11.07□□□□□ -0.64
TRA2B-205ENST00000453386 TRBV6-4A0A1B0GX49 114 aa11.07□□□□□ -0.64
TRA2B-205ENST00000453386 PLAC8L1A1L4L8 177 aa11.07□□□□□ -0.64
TRA2B-205ENST00000453386 ATP5G1P05496 136 aa11.07□□□□□ -0.64
TRA2B-205ENST00000453386 AKAP9Q99996 3911 aa11.06□□□□□ -0.64
TRA2B-205ENST00000453386 OR13C6PQ8NH95 151 aa11.06□□□□□ -0.64
TRA2B-205ENST00000453386 C11orf68Q9H3H3 251 aaKnown RBP11.06□□□□□ -0.64
TRA2B-205ENST00000453386 PAX4O43316 350 aa11.06□□□□□ -0.64
TRA2B-205ENST00000453386 PPDPFQ9H3Y8 114 aa11.06□□□□□ -0.64
TRA2B-205ENST00000453386 DNAJC9-AS1A6NH13 148 aa11.05□□□□□ -0.64
TRA2B-205ENST00000453386 TRBV6-8A0A0A6YYG3 113 aa11.05□□□□□ -0.64
TRA2B-205ENST00000453386 IGHV3OR16-9A0A0B4J2B5 98 aa11.05□□□□□ -0.64
TRA2B-205ENST00000453386 ZNF469Q96JG9 3925 aaPredicted RBP11.04□□□□□ -0.64
TRA2B-205ENST00000453386 OVOL2Q9BRP0 275 aa11.04□□□□□ -0.64
TRA2B-205ENST00000453386 C9orf129Q5T035 196 aaKnown RBP11.04□□□□□ -0.64
TRA2B-205ENST00000453386 C14orf132Q9NPU4 83 aa11.04□□□□□ -0.64
TRA2B-205ENST00000453386 SDIM1Q6ZPB5 146 aa11.03□□□□□ -0.64
TRA2B-205ENST00000453386 IBA57-AS1B1ANH7 110 aa11.03□□□□□ -0.64
TRA2B-205ENST00000453386 LECT2O14960 151 aa11.03□□□□□ -0.64
TRA2B-205ENST00000453386 TMEM86BQ8N661 226 aa11.02□□□□□ -0.64
TRA2B-205ENST00000453386 H0YGX0 51 aa11.02□□□□□ -0.65
TRA2B-205ENST00000453386 C6orf226Q5I0X4 101 aa11.02□□□□□ -0.65
TRA2B-205ENST00000453386 NBPF19A0A087WUL8 3843 aa11.02□□□□□ -0.65
TRA2B-205ENST00000453386 A0A087WZ39 114 aa11.01□□□□□ -0.65
TRA2B-205ENST00000453386 FHL2Q14192 279 aa11.01□□□□□ -0.65
TRA2B-205ENST00000453386 C9orf153Q5TBE3 101 aa11.01□□□□□ -0.65
TRA2B-205ENST00000453386 FN1P02751 2386 aaKnown RBP11.01□□□□□ -0.65
TRA2B-205ENST00000453386 SLPIP03973 132 aa11.01□□□□□ -0.65
TRA2B-205ENST00000453386 DEFB130BP0DP73 79 aa11.01□□□□□ -0.65
TRA2B-205ENST00000453386 DEFB130AP0DP74 79 aa11.01□□□□□ -0.65
TRA2B-205ENST00000453386 ESM1Q9NQ30 184 aa11.01□□□□□ -0.65
TRA2B-205ENST00000453386 CMC4P56277 68 aaPredicted RBP11□□□□□ -0.65
TRA2B-205ENST00000453386 ITPR3Q14573 2671 aa11□□□□□ -0.65
TRA2B-205ENST00000453386 XCL1P47992 114 aa11□□□□□ -0.65
TRA2B-205ENST00000453386 C3orf22Q8N5N4 141 aa11□□□□□ -0.65
TRA2B-205ENST00000453386 FAM110AQ9BQ89 295 aa11□□□□□ -0.65
TRA2B-205ENST00000453386 CXCL5P42830 114 aa10.99□□□□□ -0.65
TRA2B-205ENST00000453386 LRRC75A-AS1Q8N1F1 130 aa10.99□□□□□ -0.65
TRA2B-205ENST00000453386 TMEM126AQ9H061 195 aa10.99□□□□□ -0.65
TRA2B-205ENST00000453386 LINC00959A0A1B0GUT2 108 aa10.99□□□□□ -0.65
TRA2B-205ENST00000453386 NCR3O14931 201 aa10.98□□□□□ -0.65
TRA2B-205ENST00000453386 CSNK1G2-AS1Q8NCQ2 148 aa10.98□□□□□ -0.65
TRA2B-205ENST00000453386 CLPSL2Q6UWE3 100 aa10.97□□□□□ -0.65
TRA2B-205ENST00000453386 IGKV3D-7A0A0C4DH55 119 aa10.97□□□□□ -0.65
TRA2B-205ENST00000453386 UQCRQO14949 82 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms