RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 LENEPQ9Y5L5 61 aa2.48□□□□□ -2.01
LINC00393-202ENST00000452852 IGKV2-28A0A075B6P5 120 aa2.47□□□□□ -2.01
LINC00393-202ENST00000452852 F6UZH7 168 aa2.47□□□□□ -2.01
LINC00393-202ENST00000452852 SIX6O95475 246 aa2.47□□□□□ -2.01
LINC00393-202ENST00000452852 IGKV2D-28P01615 120 aa2.47□□□□□ -2.01
LINC00393-202ENST00000452852 PFN1P07737 140 aaKnown RBP2.47□□□□□ -2.01
LINC00393-202ENST00000452852 LINC00313P59037 77 aa2.47□□□□□ -2.01
LINC00393-202ENST00000452852 DEFA1P59665 94 aa2.47□□□□□ -2.01
LINC00393-202ENST00000452852 DEFA3P59666 94 aa2.47□□□□□ -2.01
LINC00393-202ENST00000452852 HERVK_113P63121 156 aa2.47□□□□□ -2.01
LINC00393-202ENST00000452852 IL15RAQ13261 267 aa2.47□□□□□ -2.01
LINC00393-202ENST00000452852 ACOT6Q3I5F7 207 aaPredicted RBP2.47□□□□□ -2.01
LINC00393-202ENST00000452852 Q6ZQT7 251 aa2.47□□□□□ -2.01
LINC00393-202ENST00000452852 LINC00299Q6ZSB3 139 aa2.47□□□□□ -2.01
LINC00393-202ENST00000452852 PPP1R1CQ8WVI7 109 aa2.47□□□□□ -2.01
LINC00393-202ENST00000452852 UBE2WQ96B02 151 aa2.47□□□□□ -2.01
LINC00393-202ENST00000452852 SMIM3Q9BZL3 60 aa2.47□□□□□ -2.01
LINC00393-202ENST00000452852 EIF5A2Q9GZV4 153 aaKnown RBP2.47□□□□□ -2.01
LINC00393-202ENST00000452852 HSPB11Q9Y547 144 aa2.47□□□□□ -2.01
LINC00393-202ENST00000452852 TRAPPC1Q9Y5R8 145 aa2.47□□□□□ -2.01
LINC00393-202ENST00000452852 ABCA13Q86UQ4 5058 aa2.46□□□□□ -2.01
LINC00393-202ENST00000452852 VPS13BQ7Z7G8 4022 aa2.46□□□□□ -2.01
LINC00393-202ENST00000452852 INMT-MINDY4F8WBC2 141 aa2.46□□□□□ -2.02
LINC00393-202ENST00000452852 GNRH2O43555 120 aa2.46□□□□□ -2.02
LINC00393-202ENST00000452852 JOSD1Q15040 202 aaPredicted RBP2.46□□□□□ -2.02
LINC00393-202ENST00000452852 RHOHQ15669 191 aa2.46□□□□□ -2.02
LINC00393-202ENST00000452852 TDRG1Q3Y452 100 aa2.46□□□□□ -2.02
LINC00393-202ENST00000452852 LINC01556Q5JQF7 62 aa2.46□□□□□ -2.02
LINC00393-202ENST00000452852 GOLT1AQ6ZVE7 132 aa2.46□□□□□ -2.02
LINC00393-202ENST00000452852 TMEM70Q9BUB7 260 aa2.46□□□□□ -2.02
LINC00393-202ENST00000452852 DNAH8Q96JB1 4490 aa2.45□□□□□ -2.02
LINC00393-202ENST00000452852 TRAV8-1A0A0A6YYK1 113 aa2.45□□□□□ -2.02
LINC00393-202ENST00000452852 IGHV3-73A0A0B4J1V6 119 aa2.45□□□□□ -2.02
LINC00393-202ENST00000452852 TRBV6-4A0A1B0GX49 114 aa2.45□□□□□ -2.02
LINC00393-202ENST00000452852 LRCOL1A6NCL2 159 aa2.45□□□□□ -2.02
LINC00393-202ENST00000452852 A8MWV9 139 aa2.45□□□□□ -2.02
LINC00393-202ENST00000452852 IBA57-AS1B1ANH7 110 aa2.45□□□□□ -2.02
LINC00393-202ENST00000452852 HMGB3O15347 200 aaKnown RBP2.45□□□□□ -2.02
LINC00393-202ENST00000452852 MPC2O95563 127 aa2.45□□□□□ -2.02
LINC00393-202ENST00000452852 IGHV3-30P01768 117 aa2.45□□□□□ -2.02
LINC00393-202ENST00000452852 IGHV3-33P01772 117 aa2.45□□□□□ -2.02
LINC00393-202ENST00000452852 SMR3BP02814 79 aaPredicted RBP2.45□□□□□ -2.02
LINC00393-202ENST00000452852 ARL14EPLP0DKL9 152 aa2.45□□□□□ -2.02
LINC00393-202ENST00000452852 IGHV3-30-3P0DP02 117 aa2.45□□□□□ -2.02
LINC00393-202ENST00000452852 IGHV3-30-5P0DP03 117 aa2.45□□□□□ -2.02
LINC00393-202ENST00000452852 MGST1P10620 155 aaKnown RBP2.45□□□□□ -2.02
LINC00393-202ENST00000452852 S100A4P26447 101 aaKnown RBP2.45□□□□□ -2.02
LINC00393-202ENST00000452852 GNG5P63218 68 aa2.45□□□□□ -2.02
LINC00393-202ENST00000452852 LGALSLQ3ZCW2 172 aaPredicted RBP2.45□□□□□ -2.02
LINC00393-202ENST00000452852 LELP1Q5T871 98 aa2.45□□□□□ -2.02
LINC00393-202ENST00000452852 TMEM136Q6ZRR5 245 aa2.45□□□□□ -2.02
LINC00393-202ENST00000452852 Q8N814 137 aa2.45□□□□□ -2.02
LINC00393-202ENST00000452852 C5orf17Q8NAS9 161 aa2.45□□□□□ -2.02
LINC00393-202ENST00000452852 ATP6V0E2Q8NHE4 81 aa2.45□□□□□ -2.02
LINC00393-202ENST00000452852 RMI2Q96E14 147 aa2.45□□□□□ -2.02
LINC00393-202ENST00000452852 TMEM167BQ9NRX6 74 aa2.45□□□□□ -2.02
LINC00393-202ENST00000452852 A0A087WWC5 75 aa2.44□□□□□ -2.02
LINC00393-202ENST00000452852 GGTLC3B5MD39 225 aa2.44□□□□□ -2.02
LINC00393-202ENST00000452852 H3BQ85 93 aa2.44□□□□□ -2.02
LINC00393-202ENST00000452852 M0R381 172 aa2.44□□□□□ -2.02
LINC00393-202ENST00000452852 TCRAP04437 139 aa2.44□□□□□ -2.02
LINC00393-202ENST00000452852 GCHFRP30047 84 aa2.44□□□□□ -2.02
LINC00393-202ENST00000452852 ASIPP42127 132 aa2.44□□□□□ -2.02
LINC00393-202ENST00000452852 HAMPP81172 84 aa2.44□□□□□ -2.02
LINC00393-202ENST00000452852 FLI1Q01543 452 aaPredicted RBP2.44□□□□□ -2.02
LINC00393-202ENST00000452852 CFAP126Q5VTH2 177 aa2.44□□□□□ -2.02
LINC00393-202ENST00000452852 CYTL1Q9NRR1 136 aa2.44□□□□□ -2.02
LINC00393-202ENST00000452852 CARHSP1Q9Y2V2 147 aaKnown RBP2.44□□□□□ -2.02
LINC00393-202ENST00000452852 HERC1Q15751 4861 aa2.43□□□□□ -2.02
LINC00393-202ENST00000452852 A0A087WX48 190 aa2.43□□□□□ -2.02
LINC00393-202ENST00000452852 BORCS7-ASMTA0A0B4J1R7 106 aa2.43□□□□□ -2.02
LINC00393-202ENST00000452852 FABP5P3A8MUU1 101 aa2.43□□□□□ -2.02
LINC00393-202ENST00000452852 LECT2O14960 151 aa2.43□□□□□ -2.02
LINC00393-202ENST00000452852 IFNA7P01567 189 aa2.43□□□□□ -2.02
LINC00393-202ENST00000452852 C1QBP02746 253 aa2.43□□□□□ -2.02
LINC00393-202ENST00000452852 ZNF80P51504 273 aaPredicted RBP2.43□□□□□ -2.02
LINC00393-202ENST00000452852 SERF2P84101 59 aa2.43□□□□□ -2.02
LINC00393-202ENST00000452852 ELOBQ15370 118 aa2.43□□□□□ -2.02
LINC00393-202ENST00000452852 C10orf91Q5T1B1 145 aa2.43□□□□□ -2.02
LINC00393-202ENST00000452852 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.43□□□□□ -2.02
LINC00393-202ENST00000452852 OR2T35Q8NGX2 323 aa2.43□□□□□ -2.02
LINC00393-202ENST00000452852 TVP23CQ96ET8 276 aa2.43□□□□□ -2.02
LINC00393-202ENST00000452852 PSMG3Q9BT73 122 aaPredicted RBP2.43□□□□□ -2.02
LINC00393-202ENST00000452852 NKX6-2Q9C056 277 aaPredicted RBP2.43□□□□□ -2.02
LINC00393-202ENST00000452852 EPDR1Q9UM22 224 aa2.43□□□□□ -2.02
LINC00393-202ENST00000452852 MYCBP2O75592 4640 aa2.43□□□□□ -2.02
LINC00393-202ENST00000452852 TRBV24-1A0A075B6N3 115 aa2.42□□□□□ -2.02
LINC00393-202ENST00000452852 A0A1W2PRE2 83 aa2.42□□□□□ -2.02
LINC00393-202ENST00000452852 LINC00862A6NCI5 91 aa2.42□□□□□ -2.02
LINC00393-202ENST00000452852 TMEM262E9PQX1 116 aa2.42□□□□□ -2.02
LINC00393-202ENST00000452852 H3BVH4 76 aa2.42□□□□□ -2.02
LINC00393-202ENST00000452852 SH2D1AO60880 128 aa2.42□□□□□ -2.02
LINC00393-202ENST00000452852 CRPP02741 224 aa2.42□□□□□ -2.02
LINC00393-202ENST00000452852 RNASE3P12724 160 aaKnown RBP2.42□□□□□ -2.02
LINC00393-202ENST00000452852 TPT1P13693 172 aaKnown RBP2.42□□□□□ -2.02
LINC00393-202ENST00000452852 ATP6V0CP27449 155 aa2.42□□□□□ -2.02
LINC00393-202ENST00000452852 UBE2G1P62253 170 aa2.42□□□□□ -2.02
LINC00393-202ENST00000452852 Q0VG73 95 aa2.42□□□□□ -2.02
LINC00393-202ENST00000452852 DNLZQ5SXM8 178 aa2.42□□□□□ -2.02
LINC00393-202ENST00000452852 AKR1C8PQ5T2L2 129 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms