RNA–Protein interactions for RNA: ENST00000450931.5

PMS1-217, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-217ENST00000450931 IGHV3OR16-9A0A0B4J2B5 98 aa3.88□□□□□ -1.79
PMS1-217ENST00000450931 KRTAP7-1Q8IUC3 87 aa3.88□□□□□ -1.79
PMS1-217ENST00000450931 NDUFC2-KCTD14E9PQ53 114 aa3.88□□□□□ -1.79
PMS1-217ENST00000450931 RAB4AP20338 218 aa3.88□□□□□ -1.79
PMS1-217ENST00000450931 RPL32P62910 135 aaKnown RBP3.88□□□□□ -1.79
PMS1-217ENST00000450931 MRPS36P82909 103 aaKnown RBP3.88□□□□□ -1.79
PMS1-217ENST00000450931 SPANXA1Q9NS26 97 aa3.88□□□□□ -1.79
PMS1-217ENST00000450931 A0A1B0GUT8 65 aa3.87□□□□□ -1.79
PMS1-217ENST00000450931 CRYGAP11844 174 aa3.87□□□□□ -1.79
PMS1-217ENST00000450931 SUMO2P61956 95 aaKnown RBP3.87□□□□□ -1.79
PMS1-217ENST00000450931 LINC01561Q8N1V8 128 aa3.87□□□□□ -1.79
PMS1-217ENST00000450931 OCC1Q8TAD7 63 aa3.87□□□□□ -1.79
PMS1-217ENST00000450931 LBHQ53QV2 105 aaPredicted RBP3.87□□□□□ -1.79
PMS1-217ENST00000450931 C10orf25Q5T742 122 aa3.87□□□□□ -1.79
PMS1-217ENST00000450931 TYMSOSQ8TAI1 123 aa3.87□□□□□ -1.79
PMS1-217ENST00000450931 LOC100996750A0A140TA64 210 aa3.86□□□□□ -1.79
PMS1-217ENST00000450931 TSPAN13O95857 204 aa3.86□□□□□ -1.79
PMS1-217ENST00000450931 RPL28P46779 137 aaKnown RBP3.86□□□□□ -1.79
PMS1-217ENST00000450931 GAGE2EQ4V326 116 aa3.86□□□□□ -1.79
PMS1-217ENST00000450931 UNQ6190/PRO20217Q6UXQ8 127 aa3.86□□□□□ -1.79
PMS1-217ENST00000450931 NRACQ8N912 160 aa3.86□□□□□ -1.79
PMS1-217ENST00000450931 KRTAP4-6Q9BYQ5 205 aa3.86□□□□□ -1.79
PMS1-217ENST00000450931 GAGE2DQ9UEU5 116 aa3.86□□□□□ -1.79
PMS1-217ENST00000450931 TP73-AS1Q9UF72 201 aa3.86□□□□□ -1.79
PMS1-217ENST00000450931 TGIF2-C20orf24A0A0A6YYL0 155 aa3.86□□□□□ -1.79
PMS1-217ENST00000450931 TMEM250H0YL14 139 aa3.86□□□□□ -1.79
PMS1-217ENST00000450931 HBBP68871 147 aa3.86□□□□□ -1.79
PMS1-217ENST00000450931 RNASE13Q5GAN3 156 aaKnown RBP3.86□□□□□ -1.79
PMS1-217ENST00000450931 C20orf78Q9BR46 151 aa3.86□□□□□ -1.79
PMS1-217ENST00000450931 KIAA0087Q14695 138 aa3.85□□□□□ -1.79
PMS1-217ENST00000450931 FAM229BQ4G0N7 80 aa3.85□□□□□ -1.79
PMS1-217ENST00000450931 C9orf129Q5T035 196 aaKnown RBP3.85□□□□□ -1.79
PMS1-217ENST00000450931 PACRGQ96M98 296 aaPredicted RBP3.85□□□□□ -1.79
PMS1-217ENST00000450931 CDIP1Q9H305 208 aa3.85□□□□□ -1.79
PMS1-217ENST00000450931 AMN1Q8IY45 258 aa3.85□□□□□ -1.79
PMS1-217ENST00000450931 A0A087X002 238 aa3.85□□□□□ -1.79
PMS1-217ENST00000450931 LINC00862A6NCI5 91 aa3.85□□□□□ -1.79
PMS1-217ENST00000450931 IFITM10A6NMD0 228 aa3.85□□□□□ -1.79
PMS1-217ENST00000450931 SMLR1H3BR10 107 aa3.85□□□□□ -1.79
PMS1-217ENST00000450931 BCE1O60756 84 aa3.85□□□□□ -1.79
PMS1-217ENST00000450931 RIGQ13278 110 aa3.85□□□□□ -1.79
PMS1-217ENST00000450931 TRBV24-1A0A075B6N3 115 aa3.84□□□□□ -1.79
PMS1-217ENST00000450931 HIGD1CA8MV81 97 aa3.84□□□□□ -1.79
PMS1-217ENST00000450931 CTDSP1Q9GZU7 261 aa3.84□□□□□ -1.79
PMS1-217ENST00000450931 FAM104AQ969W3 186 aa3.84□□□□□ -1.8
PMS1-217ENST00000450931 LINC00242Q5T6M2 205 aa3.83□□□□□ -1.8
PMS1-217ENST00000450931 LINC00304Q8N9R0 145 aa3.83□□□□□ -1.8
PMS1-217ENST00000450931 OSTCQ9NRP0 149 aa3.83□□□□□ -1.8
PMS1-217ENST00000450931 CRCT1Q9UGL9 99 aa3.83□□□□□ -1.8
PMS1-217ENST00000450931 C22orf24Q9Y442 160 aa3.83□□□□□ -1.8
PMS1-217ENST00000450931 A0A1B0GW15 77 aa3.83□□□□□ -1.8
PMS1-217ENST00000450931 RGS21Q2M5E4 152 aa3.83□□□□□ -1.8
PMS1-217ENST00000450931 BATF3Q9NR55 127 aa3.83□□□□□ -1.8
PMS1-217ENST00000450931 PYGO1Q9Y3Y4 419 aa3.83□□□□□ -1.8
PMS1-217ENST00000450931 IGLV7-46A0A075B6I9 117 aa3.82□□□□□ -1.8
PMS1-217ENST00000450931 ZNF727A8MUV8 499 aa3.82□□□□□ -1.8
PMS1-217ENST00000450931 SMKR1H3BMG3 65 aa3.82□□□□□ -1.8
PMS1-217ENST00000450931 FAM104BQ5XKR9 115 aa3.82□□□□□ -1.8
PMS1-217ENST00000450931 LINC00173Q6ZV60 143 aa3.82□□□□□ -1.8
PMS1-217ENST00000450931 SMIM2Q9BVW6 85 aa3.82□□□□□ -1.8
PMS1-217ENST00000450931 LINC01547P58512 204 aaPredicted RBP3.82□□□□□ -1.8
PMS1-217ENST00000450931 MRPL51Q4U2R6 128 aaKnown RBP3.82□□□□□ -1.8
PMS1-217ENST00000450931 MRPL55Q7Z7F7 128 aaKnown RBP3.82□□□□□ -1.8
PMS1-217ENST00000450931 IFI27P40305 119 aaPredicted RBP3.81□□□□□ -1.8
PMS1-217ENST00000450931 RPL39P62891 51 aaKnown RBP3.81□□□□□ -1.8
PMS1-217ENST00000450931 KRTAP13-2Q52LG2 175 aa3.81□□□□□ -1.8
PMS1-217ENST00000450931 FP248Q71RG6 208 aaPredicted RBP3.81□□□□□ -1.8
PMS1-217ENST00000450931 NPSP0C0P6 89 aa3.81□□□□□ -1.8
PMS1-217ENST00000450931 LINC01551Q86U37 167 aa3.81□□□□□ -1.8
PMS1-217ENST00000450931 SLC51BQ86UW2 128 aa3.81□□□□□ -1.8
PMS1-217ENST00000450931 Q8IZM0 81 aa3.81□□□□□ -1.8
PMS1-217ENST00000450931 NAT8BQ9UHF3 227 aa3.81□□□□□ -1.8
PMS1-217ENST00000450931 PRSS2P07478 247 aa3.8□□□□□ -1.8
PMS1-217ENST00000450931 C2orf82Q6UX34 121 aa3.8□□□□□ -1.8
PMS1-217ENST00000450931 Q6ZN92 141 aa3.8□□□□□ -1.8
PMS1-217ENST00000450931 FAM19A3Q7Z5A8 133 aa3.8□□□□□ -1.8
PMS1-217ENST00000450931 KRTAP13-1Q8IUC0 172 aa3.8□□□□□ -1.8
PMS1-217ENST00000450931 TNFRSF6BO95407 300 aa3.8□□□□□ -1.8
PMS1-217ENST00000450931 CKS1BP61024 79 aa3.8□□□□□ -1.8
PMS1-217ENST00000450931 ASB16-AS1Q495Z4 193 aa3.8□□□□□ -1.8
PMS1-217ENST00000450931 RETNLBQ9BQ08 111 aa3.8□□□□□ -1.8
PMS1-217ENST00000450931 KRTAP9-8Q9BYQ0 159 aa3.8□□□□□ -1.8
PMS1-217ENST00000450931 V9GYV3 84 aa3.8□□□□□ -1.8
PMS1-217ENST00000450931 IGLV5-37A0A075B6J1 123 aa3.8□□□□□ -1.8
PMS1-217ENST00000450931 IGLV4-3A0A075B6K6 122 aa3.8□□□□□ -1.8
PMS1-217ENST00000450931 PPBPP02775 128 aa3.8□□□□□ -1.8
PMS1-217ENST00000450931 S100A8P05109 93 aa3.8□□□□□ -1.8
PMS1-217ENST00000450931 CKS2P33552 79 aa3.8□□□□□ -1.8
PMS1-217ENST00000450931 CXCL5P42830 114 aa3.8□□□□□ -1.8
PMS1-217ENST00000450931 SPAG11AQ6PDA7 123 aa3.8□□□□□ -1.8
PMS1-217ENST00000450931 TMEM141Q96I45 108 aa3.8□□□□□ -1.8
PMS1-217ENST00000450931 C2orf88Q9BSF0 95 aa3.8□□□□□ -1.8
PMS1-217ENST00000450931 IGKV2D-26A0A0A0MRZ7 120 aa3.79□□□□□ -1.8
PMS1-217ENST00000450931 BLOC1S1P78537 153 aa3.79□□□□□ -1.8
PMS1-217ENST00000450931 FAM74A3Q4VXF1 159 aa3.79□□□□□ -1.8
PMS1-217ENST00000450931 TEX43Q6ZNM6 134 aa3.79□□□□□ -1.8
PMS1-217ENST00000450931 SMIM7Q9BQ49 75 aa3.79□□□□□ -1.8
PMS1-217ENST00000450931 PPDPFQ9H3Y8 114 aa3.79□□□□□ -1.8
PMS1-217ENST00000450931 F8VRH5 84 aa3.79□□□□□ -1.8
PMS1-217ENST00000450931 F8W036 122 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms