RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 ZFAND6Q6FIF0 208 aa11.28□□□□□ -0.6
AP000253.1-201ENST00000449339 LYRM9A8MSI8 78 aa11.27□□□□□ -0.61
AP000253.1-201ENST00000449339 Q8NAQ8 132 aa11.27□□□□□ -0.61
AP000253.1-201ENST00000449339 LITAFQ99732 161 aa11.27□□□□□ -0.61
AP000253.1-201ENST00000449339 CELA1Q9UNI1 258 aa11.27□□□□□ -0.61
AP000253.1-201ENST00000449339 GAGE6Q13070 117 aa11.27□□□□□ -0.61
AP000253.1-201ENST00000449339 CFAP161Q6P656 301 aa11.27□□□□□ -0.61
AP000253.1-201ENST00000449339 MUSTN1Q8IVN3 82 aa11.27□□□□□ -0.61
AP000253.1-201ENST00000449339 RNF183Q96D59 192 aa11.27□□□□□ -0.61
AP000253.1-201ENST00000449339 IGLV5-39A0A0G2JS06 123 aa11.26□□□□□ -0.61
AP000253.1-201ENST00000449339 A4D1N5 150 aa11.26□□□□□ -0.61
AP000253.1-201ENST00000449339 TSPAN13O95857 204 aa11.26□□□□□ -0.61
AP000253.1-201ENST00000449339 GYPEP15421 78 aa11.26□□□□□ -0.61
AP000253.1-201ENST00000449339 RPL24P83731 157 aaKnown RBP11.26□□□□□ -0.61
AP000253.1-201ENST00000449339 EGFEM1PQ0D2K5 195 aa11.26□□□□□ -0.61
AP000253.1-201ENST00000449339 CHCHD5Q9BSY4 110 aa11.25□□□□□ -0.61
AP000253.1-201ENST00000449339 PRO0255Q9UI72 69 aa11.25□□□□□ -0.61
AP000253.1-201ENST00000449339 SMIM1B2RUZ4 78 aa11.24□□□□□ -0.61
AP000253.1-201ENST00000449339 ADAMTSL4-AS1Q5T5F5 129 aa11.24□□□□□ -0.61
AP000253.1-201ENST00000449339 RETNQ9HD89 108 aa11.24□□□□□ -0.61
AP000253.1-201ENST00000449339 NOTCH1P46531 2555 aa11.24□□□□□ -0.61
AP000253.1-201ENST00000449339 ATP6V0E2Q8NHE4 81 aa11.24□□□□□ -0.61
AP000253.1-201ENST00000449339 ANK2Q01484 3957 aa11.24□□□□□ -0.61
AP000253.1-201ENST00000449339 H3BMG7 143 aa11.23□□□□□ -0.61
AP000253.1-201ENST00000449339 NDUFA1O15239 70 aa11.23□□□□□ -0.61
AP000253.1-201ENST00000449339 PRSS2P07478 247 aa11.23□□□□□ -0.61
AP000253.1-201ENST00000449339 MIFP14174 115 aa11.23□□□□□ -0.61
AP000253.1-201ENST00000449339 PRO1854Q9UHT4 67 aa11.23□□□□□ -0.61
AP000253.1-201ENST00000449339 IGLV4-60A0A075B6I1 120 aa11.23□□□□□ -0.61
AP000253.1-201ENST00000449339 F5H768 121 aa11.22□□□□□ -0.61
AP000253.1-201ENST00000449339 DAD1P61803 113 aa11.22□□□□□ -0.61
AP000253.1-201ENST00000449339 SFTA2Q6UW10 78 aa11.22□□□□□ -0.61
AP000253.1-201ENST00000449339 SPANXDQ9BXN6 97 aa11.22□□□□□ -0.61
AP000253.1-201ENST00000449339 SPANXCQ9NY87 97 aa11.22□□□□□ -0.61
AP000253.1-201ENST00000449339 A0A096LPF7 62 aa11.21□□□□□ -0.62
AP000253.1-201ENST00000449339 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.21□□□□□ -0.62
AP000253.1-201ENST00000449339 LOC107984156A0A0G2JMH3 177 aa11.21□□□□□ -0.62
AP000253.1-201ENST00000449339 EIF4EBP3O60516 100 aaPredicted RBP11.21□□□□□ -0.62
AP000253.1-201ENST00000449339 MIAQ16674 131 aa11.21□□□□□ -0.62
AP000253.1-201ENST00000449339 ARL17AQ8IVW1 177 aa11.21□□□□□ -0.62
AP000253.1-201ENST00000449339 Q9H8V8 135 aa11.21□□□□□ -0.62
AP000253.1-201ENST00000449339 A0A0B4J2C4 111 aa11.2□□□□□ -0.62
AP000253.1-201ENST00000449339 IGKV3OR2-268A0A0C4DH90 116 aa11.2□□□□□ -0.62
AP000253.1-201ENST00000449339 PAX4O43316 350 aa11.2□□□□□ -0.62
AP000253.1-201ENST00000449339 DNAH3Q8TD57 4116 aa11.2□□□□□ -0.62
AP000253.1-201ENST00000449339 TIMM17BO60830 172 aa11.2□□□□□ -0.62
AP000253.1-201ENST00000449339 A0A1B0GV72 72 aa11.18□□□□□ -0.62
AP000253.1-201ENST00000449339 F8W1H4 67 aa11.18□□□□□ -0.62
AP000253.1-201ENST00000449339 PRB2P02812 416 aaPredicted RBP11.17□□□□□ -0.62
AP000253.1-201ENST00000449339 SPART-AS1P0CW21 52 aa11.17□□□□□ -0.62
AP000253.1-201ENST00000449339 HTN3P15516 51 aa11.17□□□□□ -0.62
AP000253.1-201ENST00000449339 NPC2P61916 151 aa11.17□□□□□ -0.62
AP000253.1-201ENST00000449339 CIRBPQ14011 172 aaKnown RBP11.17□□□□□ -0.62
AP000253.1-201ENST00000449339 IGHV3-33P01772 117 aa11.17□□□□□ -0.62
AP000253.1-201ENST00000449339 LYRM7Q5U5X0 104 aa11.17□□□□□ -0.62
AP000253.1-201ENST00000449339 DAND5Q8N907 189 aa11.17□□□□□ -0.62
AP000253.1-201ENST00000449339 ZNF625Q96I27 306 aaPredicted RBP11.17□□□□□ -0.62
AP000253.1-201ENST00000449339 TENM3Q9P273 2699 aa11.17□□□□□ -0.62
AP000253.1-201ENST00000449339 NBEAL1Q6ZS30 2694 aa11.16□□□□□ -0.62
AP000253.1-201ENST00000449339 TMEM262E9PQX1 116 aa11.16□□□□□ -0.62
AP000253.1-201ENST00000449339 ATP5G1P05496 136 aa11.16□□□□□ -0.62
AP000253.1-201ENST00000449339 SIGMAR1Q99720 223 aa11.16□□□□□ -0.62
AP000253.1-201ENST00000449339 ERG28Q9UKR5 140 aa11.16□□□□□ -0.62
AP000253.1-201ENST00000449339 TRAV26-1A0A087WT03 109 aa11.15□□□□□ -0.62
AP000253.1-201ENST00000449339 IGHV3OR16-9A0A0B4J2B5 98 aa11.15□□□□□ -0.63
AP000253.1-201ENST00000449339 A0A1B0GUV1 79 aa11.15□□□□□ -0.63
AP000253.1-201ENST00000449339 H7C2G1 150 aa11.15□□□□□ -0.63
AP000253.1-201ENST00000449339 IFITM1P13164 125 aa11.15□□□□□ -0.63
AP000253.1-201ENST00000449339 PSMB2P49721 201 aa11.15□□□□□ -0.63
AP000253.1-201ENST00000449339 WFDC2Q14508 124 aa11.15□□□□□ -0.63
AP000253.1-201ENST00000449339 MTURNQ8N3F0 131 aa11.14□□□□□ -0.63
AP000253.1-201ENST00000449339 PRO0461Q9UI25 63 aa11.14□□□□□ -0.63
AP000253.1-201ENST00000449339 A0A0U1RRA0 63 aa11.13□□□□□ -0.63
AP000253.1-201ENST00000449339 LINC00959A0A1B0GUT2 108 aa11.13□□□□□ -0.63
AP000253.1-201ENST00000449339 SCGB1C2P0DMR2 95 aa11.13□□□□□ -0.63
AP000253.1-201ENST00000449339 HERV-K104P63124 156 aa11.13□□□□□ -0.63
AP000253.1-201ENST00000449339 TRBV20-1A0A075B6N2 111 aa11.12□□□□□ -0.63
AP000253.1-201ENST00000449339 TCL1BO95988 128 aa11.12□□□□□ -0.63
AP000253.1-201ENST00000449339 Q1RN00 199 aa11.12□□□□□ -0.63
AP000253.1-201ENST00000449339 MEIG1Q5JSS6 88 aa11.12□□□□□ -0.63
AP000253.1-201ENST00000449339 COX7B2Q8TF08 81 aa11.12□□□□□ -0.63
AP000253.1-201ENST00000449339 A0A087WZ39 114 aa11.11□□□□□ -0.63
AP000253.1-201ENST00000449339 LINC00308Q8TCZ7 52 aa11.11□□□□□ -0.63
AP000253.1-201ENST00000449339 TOMM7Q9P0U1 55 aa11.11□□□□□ -0.63
AP000253.1-201ENST00000449339 TEX48A0A1B0GUV7 120 aa11.09□□□□□ -0.63
AP000253.1-201ENST00000449339 C5orf38Q86SI9 138 aa11.09□□□□□ -0.63
AP000253.1-201ENST00000449339 MDFIQ99750 246 aa11.09□□□□□ -0.63
AP000253.1-201ENST00000449339 SPATA25Q9BR10 227 aa11.09□□□□□ -0.63
AP000253.1-201ENST00000449339 MGAM2Q2M2H8 2515 aa11.09□□□□□ -0.63
AP000253.1-201ENST00000449339 ETDBQ3ZM63 59 aa11.09□□□□□ -0.63
AP000253.1-201ENST00000449339 XCL1P47992 114 aa11.08□□□□□ -0.64
AP000253.1-201ENST00000449339 SS18Q15532 418 aa11.08□□□□□ -0.64
AP000253.1-201ENST00000449339 CLPSL2Q6UWE3 100 aa11.08□□□□□ -0.64
AP000253.1-201ENST00000449339 SH2D6Q7Z4S9 175 aa11.08□□□□□ -0.64
AP000253.1-201ENST00000449339 GAGE12HA6NDE8 117 aa11.08□□□□□ -0.64
AP000253.1-201ENST00000449339 J3QR89 54 aa11.08□□□□□ -0.64
AP000253.1-201ENST00000449339 MRPL23Q16540 153 aaKnown RBP11.08□□□□□ -0.64
AP000253.1-201ENST00000449339 COPS9Q8WXC6 57 aa11.08□□□□□ -0.64
AP000253.1-201ENST00000449339 Q8N3U1 123 aa11.07□□□□□ -0.64
AP000253.1-201ENST00000449339 TRBV30A0A0K0K1B3 111 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms