RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 PLAC8L1A1L4L8 177 aa9.67□□□□□ -0.86
POLR1B-209ENST00000448770 RPL36AP83881 106 aaKnown RBP9.67□□□□□ -0.86
POLR1B-209ENST00000448770 RPL36ALQ969Q0 106 aaKnown RBP9.67□□□□□ -0.86
POLR1B-209ENST00000448770 NOP10Q9NPE3 64 aaKnown RBP9.67□□□□□ -0.86
POLR1B-209ENST00000448770 CSDC2Q9Y534 153 aaKnown RBP9.67□□□□□ -0.86
POLR1B-209ENST00000448770 SETD2Q9BYW2 2564 aaPredicted RBP9.67□□□□□ -0.86
POLR1B-209ENST00000448770 FAM240AA0A1B0GVK7 77 aa9.66□□□□□ -0.86
POLR1B-209ENST00000448770 APCP25054 2843 aa9.66□□□□□ -0.86
POLR1B-209ENST00000448770 KRTAP1-3Q8IUG1 177 aa9.65□□□□□ -0.86
POLR1B-209ENST00000448770 ITPR3Q14573 2671 aa9.65□□□□□ -0.86
POLR1B-209ENST00000448770 TRBV10-1A0A0K0K1A3 114 aa9.64□□□□□ -0.87
POLR1B-209ENST00000448770 DAZ2Q13117 558 aaKnown RBP9.64□□□□□ -0.87
POLR1B-209ENST00000448770 DAZ4Q86SG3 579 aaKnown RBP9.64□□□□□ -0.87
POLR1B-209ENST00000448770 DAZ3Q9NR90 486 aaKnown RBP9.64□□□□□ -0.87
POLR1B-209ENST00000448770 IGKV2-28A0A075B6P5 120 aa9.63□□□□□ -0.87
POLR1B-209ENST00000448770 IGKV2D-28P01615 120 aa9.63□□□□□ -0.87
POLR1B-209ENST00000448770 LINC00337Q8N6G1 96 aa9.63□□□□□ -0.87
POLR1B-209ENST00000448770 GAGE7O76087 117 aa9.63□□□□□ -0.87
POLR1B-209ENST00000448770 GAGE12FP0CL80 117 aa9.63□□□□□ -0.87
POLR1B-209ENST00000448770 GAGE12GP0CL81 117 aa9.63□□□□□ -0.87
POLR1B-209ENST00000448770 GAGE12IP0CL82 117 aa9.63□□□□□ -0.87
POLR1B-209ENST00000448770 CHCHD5Q9BSY4 110 aa9.63□□□□□ -0.87
POLR1B-209ENST00000448770 ESM1Q9NQ30 184 aa9.63□□□□□ -0.87
POLR1B-209ENST00000448770 IGLV4-60A0A075B6I1 120 aa9.62□□□□□ -0.87
POLR1B-209ENST00000448770 MRPL23Q16540 153 aaKnown RBP9.62□□□□□ -0.87
POLR1B-209ENST00000448770 Q9HAA7 133 aa9.62□□□□□ -0.87
POLR1B-209ENST00000448770 IGKV3OR2-268A0A0C4DH90 116 aa9.62□□□□□ -0.87
POLR1B-209ENST00000448770 TRBV7-7A0A0K0K1E9 115 aa9.62□□□□□ -0.87
POLR1B-209ENST00000448770 CCL24O00175 119 aa9.61□□□□□ -0.87
POLR1B-209ENST00000448770 DEFB113Q30KQ7 82 aa9.61□□□□□ -0.87
POLR1B-209ENST00000448770 MIR7-3HGQ8N6C7 128 aa9.61□□□□□ -0.87
POLR1B-209ENST00000448770 TMEM243Q9BU79 118 aa9.61□□□□□ -0.87
POLR1B-209ENST00000448770 DNAJC9-AS1A6NH13 148 aa9.61□□□□□ -0.87
POLR1B-209ENST00000448770 C9orf129Q5T035 196 aaKnown RBP9.61□□□□□ -0.87
POLR1B-209ENST00000448770 BAALC-AS2P0C853 105 aa9.6□□□□□ -0.87
POLR1B-209ENST00000448770 TRAV25A0A0B4J276 109 aa9.6□□□□□ -0.87
POLR1B-209ENST00000448770 TRACP01848 142 aa9.6□□□□□ -0.87
POLR1B-209ENST00000448770 CCDC168Q8NDH2 2452 aa9.59□□□□□ -0.87
POLR1B-209ENST00000448770 RPL35AP18077 110 aaKnown RBP9.59□□□□□ -0.87
POLR1B-209ENST00000448770 HERV-K104P63124 156 aa9.59□□□□□ -0.87
POLR1B-209ENST00000448770 TOMM7Q9P0U1 55 aa9.59□□□□□ -0.87
POLR1B-209ENST00000448770 C3orf56Q8N813 242 aa9.59□□□□□ -0.87
POLR1B-209ENST00000448770 COX7B2Q8TF08 81 aa9.59□□□□□ -0.87
POLR1B-209ENST00000448770 C19orf73Q9NVV2 129 aa9.59□□□□□ -0.87
POLR1B-209ENST00000448770 ANK3Q12955 4377 aaKnown RBP9.58□□□□□ -0.88
POLR1B-209ENST00000448770 UBE2L6O14933 153 aa9.58□□□□□ -0.88
POLR1B-209ENST00000448770 FLNAP21333 2647 aaKnown RBP9.58□□□□□ -0.88
POLR1B-209ENST00000448770 A0A087WYN8 130 aa9.58□□□□□ -0.88
POLR1B-209ENST00000448770 TRGV2A0A075B6R0 118 aa9.57□□□□□ -0.88
POLR1B-209ENST00000448770 RPL28P46779 137 aaKnown RBP9.57□□□□□ -0.88
POLR1B-209ENST00000448770 HIST2H2BCQ6DN03 193 aa9.57□□□□□ -0.88
POLR1B-209ENST00000448770 SDIM1Q6ZPB5 146 aa9.57□□□□□ -0.88
POLR1B-209ENST00000448770 CSNK1G2-AS1Q8NCQ2 148 aa9.57□□□□□ -0.88
POLR1B-209ENST00000448770 IGHV3OR16-9A0A0B4J2B5 98 aa9.56□□□□□ -0.88
POLR1B-209ENST00000448770 FAM236AA0A1B0GUQ0 79 aa9.56□□□□□ -0.88
POLR1B-209ENST00000448770 FAM236BA0A1B0GV22 79 aa9.56□□□□□ -0.88
POLR1B-209ENST00000448770 CCL18P55774 89 aa9.56□□□□□ -0.88
POLR1B-209ENST00000448770 SMIM11BQ8TCY0 68 aa9.56□□□□□ -0.88
POLR1B-209ENST00000448770 SND1-IT1Q9HBX3 110 aa9.56□□□□□ -0.88
POLR1B-209ENST00000448770 WFDC11Q8NEX6 87 aa9.55□□□□□ -0.88
POLR1B-209ENST00000448770 CRPP02741 224 aa9.55□□□□□ -0.88
POLR1B-209ENST00000448770 FHL2Q14192 279 aa9.55□□□□□ -0.88
POLR1B-209ENST00000448770 C5orf38Q86SI9 138 aa9.55□□□□□ -0.88
POLR1B-209ENST00000448770 COPS9Q8WXC6 57 aa9.55□□□□□ -0.88
POLR1B-209ENST00000448770 TRBV6-4A0A1B0GX49 114 aa9.54□□□□□ -0.88
POLR1B-209ENST00000448770 C16orf74Q96GX8 76 aa9.54□□□□□ -0.88
POLR1B-209ENST00000448770 PPDPFQ9H3Y8 114 aa9.54□□□□□ -0.88
POLR1B-209ENST00000448770 LINC00158P58513 81 aa9.54□□□□□ -0.88
POLR1B-209ENST00000448770 FAM222AQ5U5X8 452 aa9.54□□□□□ -0.88
POLR1B-209ENST00000448770 TENM4Q6N022 2769 aa9.53□□□□□ -0.88
POLR1B-209ENST00000448770 TRBV6-8A0A0A6YYG3 113 aa9.53□□□□□ -0.88
POLR1B-209ENST00000448770 TRGV4A0A0C4DH28 118 aa9.53□□□□□ -0.88
POLR1B-209ENST00000448770 J3QKU1 62 aa9.53□□□□□ -0.88
POLR1B-209ENST00000448770 ATP5G1P05496 136 aa9.53□□□□□ -0.88
POLR1B-209ENST00000448770 ACYP1P07311 99 aa9.53□□□□□ -0.88
POLR1B-209ENST00000448770 MALP21145 153 aa9.53□□□□□ -0.88
POLR1B-209ENST00000448770 TRAV13-2A0A0B4J235 113 aa9.53□□□□□ -0.88
POLR1B-209ENST00000448770 PFN2P35080 140 aa9.53□□□□□ -0.88
POLR1B-209ENST00000448770 OVOL2Q9BRP0 275 aa9.53□□□□□ -0.88
POLR1B-209ENST00000448770 C11orf68Q9H3H3 251 aaKnown RBP9.53□□□□□ -0.88
POLR1B-209ENST00000448770 TMEM86BQ8N661 226 aa9.52□□□□□ -0.89
POLR1B-209ENST00000448770 SVIPQ8NHG7 77 aa9.52□□□□□ -0.89
POLR1B-209ENST00000448770 FN1P02751 2386 aaKnown RBP9.52□□□□□ -0.89
POLR1B-209ENST00000448770 GAGE2AQ6NT46 116 aa9.51□□□□□ -0.89
POLR1B-209ENST00000448770 LINC00643Q86TS7 51 aa9.51□□□□□ -0.89
POLR1B-209ENST00000448770 LRRC75A-AS1Q8N1F1 130 aa9.51□□□□□ -0.89
POLR1B-209ENST00000448770 ACANP16112 2415 aa9.51□□□□□ -0.89
POLR1B-209ENST00000448770 MTORP42345 2549 aa9.51□□□□□ -0.89
POLR1B-209ENST00000448770 LINC01006Q8NI28 216 aa9.5□□□□□ -0.89
POLR1B-209ENST00000448770 A0A087WZ39 114 aa9.5□□□□□ -0.89
POLR1B-209ENST00000448770 IGLV1-51P01701 117 aa9.5□□□□□ -0.89
POLR1B-209ENST00000448770 PF4P02776 101 aa9.5□□□□□ -0.89
POLR1B-209ENST00000448770 NBEAL2Q6ZNJ1 2754 aa9.5□□□□□ -0.89
POLR1B-209ENST00000448770 C14orf132Q9NPU4 83 aa9.49□□□□□ -0.89
POLR1B-209ENST00000448770 SLPIP03973 132 aa9.49□□□□□ -0.89
POLR1B-209ENST00000448770 GCN1Q92616 2671 aaKnown RBP9.49□□□□□ -0.89
POLR1B-209ENST00000448770 LINC00959A0A1B0GUT2 108 aa9.48□□□□□ -0.89
POLR1B-209ENST00000448770 CLPSL2Q6UWE3 100 aa9.48□□□□□ -0.89
POLR1B-209ENST00000448770 IMUPQ9GZP8 106 aa9.48□□□□□ -0.89
POLR1B-209ENST00000448770 IBA57-AS1B1ANH7 110 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms