RNA–Protein interactions for RNA: ENST00000448572.1

SSBP3-209, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-209ENST00000448572 GAGE2DQ9UEU5 116 aa6.2□□□□□ -1.42
SSBP3-209ENST00000448572 IGHV3OR16-9A0A0B4J2B5 98 aa6.19□□□□□ -1.42
SSBP3-209ENST00000448572 IFITM10A6NMD0 228 aa6.19□□□□□ -1.42
SSBP3-209ENST00000448572 NDUFC2-KCTD14E9PQ53 114 aa6.19□□□□□ -1.42
SSBP3-209ENST00000448572 ZNF861PO60384 105 aa6.19□□□□□ -1.42
SSBP3-209ENST00000448572 KRTAP1-4P0C5Y4 121 aa6.19□□□□□ -1.42
SSBP3-209ENST00000448572 BLOC1S1P78537 153 aa6.19□□□□□ -1.42
SSBP3-209ENST00000448572 MRPS36P82909 103 aaKnown RBP6.19□□□□□ -1.42
SSBP3-209ENST00000448572 RNASE13Q5GAN3 156 aaKnown RBP6.19□□□□□ -1.42
SSBP3-209ENST00000448572 Q6ZUT4 128 aa6.19□□□□□ -1.42
SSBP3-209ENST00000448572 AMN1Q8IY45 258 aa6.19□□□□□ -1.42
SSBP3-209ENST00000448572 A0A1B0GW15 77 aa6.18□□□□□ -1.42
SSBP3-209ENST00000448572 S100A8P05109 93 aa6.18□□□□□ -1.42
SSBP3-209ENST00000448572 RPL28P46779 137 aaKnown RBP6.18□□□□□ -1.42
SSBP3-209ENST00000448572 RPL32P62910 135 aaKnown RBP6.18□□□□□ -1.42
SSBP3-209ENST00000448572 OSTCQ9NRP0 149 aa6.18□□□□□ -1.42
SSBP3-209ENST00000448572 CRYGAP11844 174 aa6.17□□□□□ -1.42
SSBP3-209ENST00000448572 IFI27P40305 119 aaPredicted RBP6.17□□□□□ -1.42
SSBP3-209ENST00000448572 CEBPGP53567 150 aa6.17□□□□□ -1.42
SSBP3-209ENST00000448572 SMIM7Q9BQ49 75 aa6.17□□□□□ -1.42
SSBP3-209ENST00000448572 C6orf48Q9UBA6 75 aa6.17□□□□□ -1.42
SSBP3-209ENST00000448572 NAT8BQ9UHF3 227 aa6.17□□□□□ -1.42
SSBP3-209ENST00000448572 TRBV24-1A0A075B6N3 115 aa6.16□□□□□ -1.42
SSBP3-209ENST00000448572 FAM168BA1KXE4 195 aa6.16□□□□□ -1.42
SSBP3-209ENST00000448572 PRSS2P07478 247 aa6.16□□□□□ -1.42
SSBP3-209ENST00000448572 RAB5AP20339 215 aa6.16□□□□□ -1.42
SSBP3-209ENST00000448572 CKS2P33552 79 aa6.16□□□□□ -1.42
SSBP3-209ENST00000448572 UNQ6190/PRO20217Q6UXQ8 127 aa6.16□□□□□ -1.42
SSBP3-209ENST00000448572 TYMSOSQ8TAI1 123 aa6.16□□□□□ -1.42
SSBP3-209ENST00000448572 LPAP08519 4548 aa6.15□□□□□ -1.42
SSBP3-209ENST00000448572 F8W036 122 aa6.15□□□□□ -1.42
SSBP3-209ENST00000448572 TSPAN13O95857 204 aa6.15□□□□□ -1.42
SSBP3-209ENST00000448572 CKS1BP61024 79 aa6.15□□□□□ -1.42
SSBP3-209ENST00000448572 CTAG1AP78358 180 aa6.15□□□□□ -1.42
SSBP3-209ENST00000448572 LINC01561Q8N1V8 128 aa6.15□□□□□ -1.42
SSBP3-209ENST00000448572 NRACQ8N912 160 aa6.15□□□□□ -1.42
SSBP3-209ENST00000448572 C2orf88Q9BSF0 95 aa6.15□□□□□ -1.42
SSBP3-209ENST00000448572 ZNF727A8MUV8 499 aa6.14□□□□□ -1.43
SSBP3-209ENST00000448572 PPBPP02775 128 aa6.14□□□□□ -1.43
SSBP3-209ENST00000448572 C10orf25Q5T742 122 aa6.14□□□□□ -1.43
SSBP3-209ENST00000448572 FAM104BQ5XKR9 115 aa6.14□□□□□ -1.43
SSBP3-209ENST00000448572 Q6ZN92 141 aa6.14□□□□□ -1.43
SSBP3-209ENST00000448572 LINC01551Q86U37 167 aa6.14□□□□□ -1.43
SSBP3-209ENST00000448572 EIF5A2Q9GZV4 153 aaKnown RBP6.14□□□□□ -1.43
SSBP3-209ENST00000448572 CDIP1Q9H305 208 aa6.14□□□□□ -1.43
SSBP3-209ENST00000448572 KRTAP9-6A0A140TA67 174 aa6.13□□□□□ -1.43
SSBP3-209ENST00000448572 SMKR1H3BMG3 65 aa6.13□□□□□ -1.43
SSBP3-209ENST00000448572 SMIM2Q9BVW6 85 aa6.13□□□□□ -1.43
SSBP3-209ENST00000448572 TP73-AS1Q9UF72 201 aa6.13□□□□□ -1.43
SSBP3-209ENST00000448572 TNFRSF6BO95407 300 aa6.12□□□□□ -1.43
SSBP3-209ENST00000448572 RPL39P62891 51 aaKnown RBP6.12□□□□□ -1.43
SSBP3-209ENST00000448572 SEC11AP67812 179 aa6.12□□□□□ -1.43
SSBP3-209ENST00000448572 MRPL51Q4U2R6 128 aaKnown RBP6.12□□□□□ -1.43
SSBP3-209ENST00000448572 FAM74A3Q4VXF1 159 aa6.12□□□□□ -1.43
SSBP3-209ENST00000448572 C6orf226Q5I0X4 101 aa6.12□□□□□ -1.43
SSBP3-209ENST00000448572 TEX43Q6ZNM6 134 aa6.12□□□□□ -1.43
SSBP3-209ENST00000448572 PYGO1Q9Y3Y4 419 aa6.12□□□□□ -1.43
SSBP3-209ENST00000448572 MUC2Q02817 5179 aa6.12□□□□□ -1.43
SSBP3-209ENST00000448572 BCE1O60756 84 aa6.11□□□□□ -1.43
SSBP3-209ENST00000448572 KIAA0087Q14695 138 aa6.11□□□□□ -1.43
SSBP3-209ENST00000448572 PAPPA-AS1Q5QFB9 102 aa6.11□□□□□ -1.43
SSBP3-209ENST00000448572 LCE2AQ5TA79 106 aaPredicted RBP6.11□□□□□ -1.43
SSBP3-209ENST00000448572 KRTAP11-1Q8IUC1 163 aa6.11□□□□□ -1.43
SSBP3-209ENST00000448572 TMEM141Q96I45 108 aa6.11□□□□□ -1.43
SSBP3-209ENST00000448572 CTDSP1Q9GZU7 261 aa6.11□□□□□ -1.43
SSBP3-209ENST00000448572 CXCL5P42830 114 aa6.1□□□□□ -1.43
SSBP3-209ENST00000448572 TPRXLQ17RH7 258 aa6.1□□□□□ -1.43
SSBP3-209ENST00000448572 C9orf129Q5T035 196 aaKnown RBP6.1□□□□□ -1.43
SSBP3-209ENST00000448572 MRPL55Q7Z7F7 128 aaKnown RBP6.1□□□□□ -1.43
SSBP3-209ENST00000448572 TCTE3Q8IZS6 198 aa6.1□□□□□ -1.43
SSBP3-209ENST00000448572 C22orf24Q9Y442 160 aa6.1□□□□□ -1.43
SSBP3-209ENST00000448572 V9GYV3 84 aa6.1□□□□□ -1.43
SSBP3-209ENST00000448572 NPSP0C0P6 89 aa6.09□□□□□ -1.43
SSBP3-209ENST00000448572 G0S2P27469 103 aa6.09□□□□□ -1.43
SSBP3-209ENST00000448572 FAM229BQ4G0N7 80 aa6.09□□□□□ -1.43
SSBP3-209ENST00000448572 LINC00242Q5T6M2 205 aa6.09□□□□□ -1.43
SSBP3-209ENST00000448572 C2orf82Q6UX34 121 aa6.09□□□□□ -1.43
SSBP3-209ENST00000448572 Q8IZM0 81 aa6.09□□□□□ -1.43
SSBP3-209ENST00000448572 IGKV2D-26A0A0A0MRZ7 120 aa6.08□□□□□ -1.44
SSBP3-209ENST00000448572 D6R8Y8 96 aa6.08□□□□□ -1.44
SSBP3-209ENST00000448572 KRTAP7-1Q8IUC3 87 aa6.08□□□□□ -1.44
SSBP3-209ENST00000448572 ORMDL3Q8N138 153 aa6.08□□□□□ -1.44
SSBP3-209ENST00000448572 ALKBH7Q9BT30 221 aaPredicted RBP6.08□□□□□ -1.44
SSBP3-209ENST00000448572 VCX2Q9H322 139 aa6.08□□□□□ -1.44
SSBP3-209ENST00000448572 TOMM7Q9P0U1 55 aa6.08□□□□□ -1.44
SSBP3-209ENST00000448572 LAMTOR2Q9Y2Q5 125 aa6.08□□□□□ -1.44
SSBP3-209ENST00000448572 SMIM27A0A1W2PRY6 76 aa6.07□□□□□ -1.44
SSBP3-209ENST00000448572 F8VRH5 84 aa6.07□□□□□ -1.44
SSBP3-209ENST00000448572 UBE2AP49459 152 aa6.07□□□□□ -1.44
SSBP3-209ENST00000448572 LINC00304Q8N9R0 145 aa6.07□□□□□ -1.44
SSBP3-209ENST00000448572 CYSLTR1Q9Y271 337 aa6.07□□□□□ -1.44
SSBP3-209ENST00000448572 IGLV7-46A0A075B6I9 117 aa6.06□□□□□ -1.44
SSBP3-209ENST00000448572 IGLV4-3A0A075B6K6 122 aa6.06□□□□□ -1.44
SSBP3-209ENST00000448572 A0A087X002 238 aa6.06□□□□□ -1.44
SSBP3-209ENST00000448572 K7EMI3 77 aa6.06□□□□□ -1.44
SSBP3-209ENST00000448572 HERVK_113P63121 156 aa6.06□□□□□ -1.44
SSBP3-209ENST00000448572 ADIRFQ15847 76 aa6.06□□□□□ -1.44
SSBP3-209ENST00000448572 ALKAL2Q6UX46 152 aa6.06□□□□□ -1.44
SSBP3-209ENST00000448572 LINC00173Q6ZV60 143 aa6.06□□□□□ -1.44
SSBP3-209ENST00000448572 XAGE1AQ9HD64 81 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms