RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 K7EQD1 137 aa11.35□□□□□ -0.59
CHRD-205ENST00000448472 C5orf38Q86SI9 138 aa11.35□□□□□ -0.59
CHRD-205ENST00000448472 TMEM243Q9BU79 118 aa11.35□□□□□ -0.59
CHRD-205ENST00000448472 MRPL23Q16540 153 aaKnown RBP11.35□□□□□ -0.59
CHRD-205ENST00000448472 ACYP1P07311 99 aa11.35□□□□□ -0.59
CHRD-205ENST00000448472 FAM218AQ96MZ4 157 aa11.35□□□□□ -0.59
CHRD-205ENST00000448472 LOC100131303A0A0U1RQF7 123 aa11.34□□□□□ -0.59
CHRD-205ENST00000448472 IGKV3D-7A0A0C4DH55 119 aa11.34□□□□□ -0.59
CHRD-205ENST00000448472 PRB1P04280 392 aa11.34□□□□□ -0.59
CHRD-205ENST00000448472 DEFB114Q30KQ6 69 aa11.33□□□□□ -0.6
CHRD-205ENST00000448472 LINC00643Q86TS7 51 aa11.33□□□□□ -0.6
CHRD-205ENST00000448472 C14orf132Q9NPU4 83 aa11.33□□□□□ -0.6
CHRD-205ENST00000448472 ACANP16112 2415 aa11.33□□□□□ -0.6
CHRD-205ENST00000448472 INAFM2P0DMQ5 153 aa11.32□□□□□ -0.6
CHRD-205ENST00000448472 HIST2H2BCQ6DN03 193 aa11.32□□□□□ -0.6
CHRD-205ENST00000448472 NTM-AS1Q6ZSK4 140 aa11.32□□□□□ -0.6
CHRD-205ENST00000448472 SMCR5Q8TEV8 140 aa11.32□□□□□ -0.6
CHRD-205ENST00000448472 TRAV13-2A0A0B4J235 113 aa11.32□□□□□ -0.6
CHRD-205ENST00000448472 SHISA2Q6UWI4 295 aa11.32□□□□□ -0.6
CHRD-205ENST00000448472 SDIM1Q6ZPB5 146 aa11.32□□□□□ -0.6
CHRD-205ENST00000448472 MALP21145 153 aa11.31□□□□□ -0.6
CHRD-205ENST00000448472 DSCR9P59020 149 aa11.31□□□□□ -0.6
CHRD-205ENST00000448472 CDC42SE2Q9NRR3 84 aa11.31□□□□□ -0.6
CHRD-205ENST00000448472 IGLV5-39A0A0G2JS06 123 aa11.31□□□□□ -0.6
CHRD-205ENST00000448472 SLPIP03973 132 aa11.31□□□□□ -0.6
CHRD-205ENST00000448472 NF1P21359 2839 aa11.31□□□□□ -0.6
CHRD-205ENST00000448472 CLPSL2Q6UWE3 100 aa11.3□□□□□ -0.6
CHRD-205ENST00000448472 Q6YL49 198 aa11.3□□□□□ -0.6
CHRD-205ENST00000448472 COX7B2Q8TF08 81 aa11.3□□□□□ -0.6
CHRD-205ENST00000448472 LECT2O14960 151 aa11.3□□□□□ -0.6
CHRD-205ENST00000448472 TRACP01848 142 aa11.3□□□□□ -0.6
CHRD-205ENST00000448472 ODF3L2Q3SX64 289 aa11.3□□□□□ -0.6
CHRD-205ENST00000448472 C1orf158Q8N1D5 194 aa11.3□□□□□ -0.6
CHRD-205ENST00000448472 IGLV5-45A0A087WSX0 123 aa11.29□□□□□ -0.6
CHRD-205ENST00000448472 C6orf226Q5I0X4 101 aa11.29□□□□□ -0.6
CHRD-205ENST00000448472 Q96MF0 132 aa11.29□□□□□ -0.6
CHRD-205ENST00000448472 WFDC10AQ9H1F0 79 aa11.29□□□□□ -0.6
CHRD-205ENST00000448472 PLA2G2AP14555 144 aa11.29□□□□□ -0.6
CHRD-205ENST00000448472 BEAN1Q3B7T3 259 aa11.29□□□□□ -0.6
CHRD-205ENST00000448472 KLK5Q9Y337 293 aaPredicted RBP11.29□□□□□ -0.6
CHRD-205ENST00000448472 TRBV7-7A0A0K0K1E9 115 aa11.29□□□□□ -0.6
CHRD-205ENST00000448472 RNF152Q8N8N0 203 aa11.28□□□□□ -0.6
CHRD-205ENST00000448472 DEFB130BP0DP73 79 aa11.28□□□□□ -0.6
CHRD-205ENST00000448472 DEFB130AP0DP74 79 aa11.28□□□□□ -0.6
CHRD-205ENST00000448472 LINC00337Q8N6G1 96 aa11.28□□□□□ -0.6
CHRD-205ENST00000448472 HIVEP2P31629 2446 aa11.28□□□□□ -0.6
CHRD-205ENST00000448472 HIST1H4AP62805 103 aaKnown RBP11.27□□□□□ -0.61
CHRD-205ENST00000448472 A0A087WYN8 130 aa11.27□□□□□ -0.61
CHRD-205ENST00000448472 A0A096LPF7 62 aa11.27□□□□□ -0.61
CHRD-205ENST00000448472 J3QLI3 93 aa11.27□□□□□ -0.61
CHRD-205ENST00000448472 SMIM11BQ8TCY0 68 aa11.27□□□□□ -0.61
CHRD-205ENST00000448472 DEFB121Q5J5C9 76 aa11.26□□□□□ -0.61
CHRD-205ENST00000448472 XCL1P47992 114 aa11.26□□□□□ -0.61
CHRD-205ENST00000448472 TRBV10-1A0A0K0K1A3 114 aa11.25□□□□□ -0.61
CHRD-205ENST00000448472 NCR3O14931 201 aa11.25□□□□□ -0.61
CHRD-205ENST00000448472 HECTD1Q9ULT8 2610 aa11.25□□□□□ -0.61
CHRD-205ENST00000448472 C4orf3Q8WVX3 66 aa11.25□□□□□ -0.61
CHRD-205ENST00000448472 PRORYQ9H606 182 aa11.25□□□□□ -0.61
CHRD-205ENST00000448472 C3orf22Q8N5N4 141 aa11.24□□□□□ -0.61
CHRD-205ENST00000448472 LINC01600Q96MT4 127 aa11.24□□□□□ -0.61
CHRD-205ENST00000448472 TMEM126AQ9H061 195 aa11.24□□□□□ -0.61
CHRD-205ENST00000448472 IGLV4-60A0A075B6I1 120 aa11.23□□□□□ -0.61
CHRD-205ENST00000448472 IMUPQ9GZP8 106 aa11.23□□□□□ -0.61
CHRD-205ENST00000448472 F5H768 121 aa11.23□□□□□ -0.61
CHRD-205ENST00000448472 CCL18P55774 89 aa11.23□□□□□ -0.61
CHRD-205ENST00000448472 NBEAL2Q6ZNJ1 2754 aa11.22□□□□□ -0.61
CHRD-205ENST00000448472 A0A087WVE0 104 aa11.22□□□□□ -0.61
CHRD-205ENST00000448472 CCL24O00175 119 aa11.22□□□□□ -0.61
CHRD-205ENST00000448472 A0A1B0GX51 115 aa11.22□□□□□ -0.61
CHRD-205ENST00000448472 IGHV4-31P0DP07 118 aa11.22□□□□□ -0.61
CHRD-205ENST00000448472 FAM110AQ9BQ89 295 aa11.22□□□□□ -0.61
CHRD-205ENST00000448472 NIPBLQ6KC79 2804 aaeCLIP11.22□□□□□ -0.61
CHRD-205ENST00000448472 UQCRQO14949 82 aa11.22□□□□□ -0.61
CHRD-205ENST00000448472 HELZ2Q9BYK8 2649 aaKnown RBP11.22□□□□□ -0.61
CHRD-205ENST00000448472 PPDPFQ9H3Y8 114 aa11.21□□□□□ -0.61
CHRD-205ENST00000448472 hADV29S1A0JD25 119 aa11.21□□□□□ -0.62
CHRD-205ENST00000448472 C9orf129Q5T035 196 aaKnown RBP11.21□□□□□ -0.62
CHRD-205ENST00000448472 FLNBO75369 2602 aaKnown RBP11.21□□□□□ -0.62
CHRD-205ENST00000448472 LOC107984640A0A0U1RRK4 108 aa11.2□□□□□ -0.62
CHRD-205ENST00000448472 RPL28P46779 137 aaKnown RBP11.2□□□□□ -0.62
CHRD-205ENST00000448472 IGKV2-28A0A075B6P5 120 aa11.19□□□□□ -0.62
CHRD-205ENST00000448472 IGKV2D-28P01615 120 aa11.19□□□□□ -0.62
CHRD-205ENST00000448472 PF4P02776 101 aa11.19□□□□□ -0.62
CHRD-205ENST00000448472 CSDC2Q9Y534 153 aaKnown RBP11.19□□□□□ -0.62
CHRD-205ENST00000448472 OVOL2Q9BRP0 275 aa11.19□□□□□ -0.62
CHRD-205ENST00000448472 KRTAP10-9P60411 292 aa11.18□□□□□ -0.62
CHRD-205ENST00000448472 TMEM86BQ8N661 226 aa11.18□□□□□ -0.62
CHRD-205ENST00000448472 GCN1Q92616 2671 aaKnown RBP11.18□□□□□ -0.62
CHRD-205ENST00000448472 PRR3P79522 188 aaKnown RBP11.18□□□□□ -0.62
CHRD-205ENST00000448472 H0YGX0 51 aa11.18□□□□□ -0.62
CHRD-205ENST00000448472 A8MTW9 85 aa11.17□□□□□ -0.62
CHRD-205ENST00000448472 LINC00846Q9NV44 126 aa11.17□□□□□ -0.62
CHRD-205ENST00000448472 IGLV10-54A0A075B6I4 117 aa11.16□□□□□ -0.62
CHRD-205ENST00000448472 ATOX1O00244 68 aa11.16□□□□□ -0.62
CHRD-205ENST00000448472 LRRC75A-AS1Q8N1F1 130 aa11.16□□□□□ -0.62
CHRD-205ENST00000448472 ORMDL1Q9P0S3 153 aa11.15□□□□□ -0.62
CHRD-205ENST00000448472 TRBV6-8A0A0A6YYG3 113 aa11.15□□□□□ -0.62
CHRD-205ENST00000448472 COX7CP15954 63 aa11.15□□□□□ -0.62
CHRD-205ENST00000448472 FAM222AQ5U5X8 452 aa11.15□□□□□ -0.62
CHRD-205ENST00000448472 FLNAP21333 2647 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 177.9 ms