RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 HIST2H2BEQ16778 126 aa11.61□□□□□ -0.55
HLCS-205ENST00000448340 PDZD11Q5EBL8 140 aa11.61□□□□□ -0.55
HLCS-205ENST00000448340 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.61□□□□□ -0.55
HLCS-205ENST00000448340 SPATA12Q7Z6I5 190 aa11.61□□□□□ -0.55
HLCS-205ENST00000448340 HIST1H2BHQ93079 126 aa11.61□□□□□ -0.55
HLCS-205ENST00000448340 HIST1H2BNQ99877 126 aa11.61□□□□□ -0.55
HLCS-205ENST00000448340 HIST1H2BMQ99879 126 aa11.61□□□□□ -0.55
HLCS-205ENST00000448340 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.6□□□□□ -0.55
HLCS-205ENST00000448340 SERF1AO75920 110 aa11.6□□□□□ -0.55
HLCS-205ENST00000448340 LINC00310P59036 64 aa11.6□□□□□ -0.55
HLCS-205ENST00000448340 ZC2HC1BQ5TFG8 222 aa11.6□□□□□ -0.55
HLCS-205ENST00000448340 PGPEP1Q9NXJ5 209 aa11.6□□□□□ -0.55
HLCS-205ENST00000448340 UBE2D1P51668 147 aa11.59□□□□□ -0.55
HLCS-205ENST00000448340 KRTAP10-2P60368 255 aa11.59□□□□□ -0.55
HLCS-205ENST00000448340 CFAP161Q6P656 301 aa11.59□□□□□ -0.55
HLCS-205ENST00000448340 ATP5LO75964 103 aa11.58□□□□□ -0.56
HLCS-205ENST00000448340 CDPF1Q6NVV7 123 aa11.58□□□□□ -0.56
HLCS-205ENST00000448340 NTN5Q8WTR8 489 aaPredicted RBP11.58□□□□□ -0.56
HLCS-205ENST00000448340 COX7A2LO14548 114 aa11.57□□□□□ -0.56
HLCS-205ENST00000448340 PMVKQ15126 192 aa11.57□□□□□ -0.56
HLCS-205ENST00000448340 LINC00242Q5T6M2 205 aa11.57□□□□□ -0.56
HLCS-205ENST00000448340 FAM19A3Q7Z5A8 133 aa11.57□□□□□ -0.56
HLCS-205ENST00000448340 IGHV3OR16-9A0A0B4J2B5 98 aa11.56□□□□□ -0.56
HLCS-205ENST00000448340 FAM19A2Q8N3H0 131 aa11.56□□□□□ -0.56
HLCS-205ENST00000448340 C15orf56Q8N910 161 aa11.56□□□□□ -0.56
HLCS-205ENST00000448340 CST9LQ9H4G1 147 aa11.56□□□□□ -0.56
HLCS-205ENST00000448340 IGHV1-58A0A0C4DH39 117 aa11.55□□□□□ -0.56
HLCS-205ENST00000448340 NUPR1O60356 82 aa11.55□□□□□ -0.56
HLCS-205ENST00000448340 PRSS1P07477 247 aa11.55□□□□□ -0.56
HLCS-205ENST00000448340 SEC11AP67812 179 aa11.55□□□□□ -0.56
HLCS-205ENST00000448340 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.54□□□□□ -0.56
HLCS-205ENST00000448340 IGLV5-52A0A0A0MRZ9 124 aa11.54□□□□□ -0.56
HLCS-205ENST00000448340 MALP21145 153 aa11.54□□□□□ -0.56
HLCS-205ENST00000448340 COX6A2Q02221 97 aa11.54□□□□□ -0.56
HLCS-205ENST00000448340 C5orf38Q86SI9 138 aa11.54□□□□□ -0.56
HLCS-205ENST00000448340 hDV102S1A0JD36 115 aa11.53□□□□□ -0.56
HLCS-205ENST00000448340 FUSP35637 526 aaKnown RBP eCLIP11.53□□□□□ -0.56
HLCS-205ENST00000448340 GVQW2A0A096LPI5 108 aaPredicted RBP11.52□□□□□ -0.57
HLCS-205ENST00000448340 APOMO95445 188 aa11.52□□□□□ -0.57
HLCS-205ENST00000448340 NDUFA6P56556 154 aa11.52□□□□□ -0.57
HLCS-205ENST00000448340 HERVK_113P63121 156 aa11.52□□□□□ -0.57
HLCS-205ENST00000448340 COA6Q5JTJ3 125 aaKnown RBP11.52□□□□□ -0.57
HLCS-205ENST00000448340 IFI27L1Q96BM0 104 aa11.52□□□□□ -0.57
HLCS-205ENST00000448340 A0A087WZ39 114 aa11.51□□□□□ -0.57
HLCS-205ENST00000448340 A0A0J9YXV3 536 aa11.51□□□□□ -0.57
HLCS-205ENST00000448340 LEPROTL1O95214 131 aa11.51□□□□□ -0.57
HLCS-205ENST00000448340 GEMIN7Q9H840 131 aaKnown RBP11.51□□□□□ -0.57
HLCS-205ENST00000448340 DMBT1Q9UGM3 2413 aaPredicted RBP11.5□□□□□ -0.57
HLCS-205ENST00000448340 TINCRA0A1B0GVN0 87 aa11.5□□□□□ -0.57
HLCS-205ENST00000448340 HIGD2BQ4VC39 106 aa11.5□□□□□ -0.57
HLCS-205ENST00000448340 LINC01561Q8N1V8 128 aa11.5□□□□□ -0.57
HLCS-205ENST00000448340 HSPB8Q9UJY1 196 aa11.49□□□□□ -0.57
HLCS-205ENST00000448340 IGHV3-64A0A075B6Q5 118 aa11.48□□□□□ -0.57
HLCS-205ENST00000448340 TRAV12-1A0A0B4J245 112 aa11.48□□□□□ -0.57
HLCS-205ENST00000448340 GCSHP23434 173 aa11.48□□□□□ -0.57
HLCS-205ENST00000448340 CNBPP62633 177 aaKnown RBP11.48□□□□□ -0.57
HLCS-205ENST00000448340 FAT1Q14517 4588 aa11.48□□□□□ -0.57
HLCS-205ENST00000448340 ZNF561-AS1K7EIQ3 104 aa11.47□□□□□ -0.57
HLCS-205ENST00000448340 IGLC3P0DOY3 106 aa11.47□□□□□ -0.57
HLCS-205ENST00000448340 OR10D4PQ8NGN7 298 aa11.47□□□□□ -0.57
HLCS-205ENST00000448340 CDKN2A-AS1Q9UH64 79 aa11.47□□□□□ -0.57
HLCS-205ENST00000448340 IGLV5-45A0A087WSX0 123 aa11.46□□□□□ -0.57
HLCS-205ENST00000448340 SLPIP03973 132 aa11.46□□□□□ -0.57
HLCS-205ENST00000448340 FABP4P15090 132 aa11.46□□□□□ -0.57
HLCS-205ENST00000448340 LINC00469Q8N7U9 141 aa11.46□□□□□ -0.57
HLCS-205ENST00000448340 ORAOV1Q8WV07 137 aa11.46□□□□□ -0.57
HLCS-205ENST00000448340 PACRGQ96M98 296 aaPredicted RBP11.46□□□□□ -0.57
HLCS-205ENST00000448340 DNAH8Q96JB1 4490 aa11.46□□□□□ -0.57
HLCS-205ENST00000448340 IGLV4-69A0A075B6H9 119 aa11.45□□□□□ -0.58
HLCS-205ENST00000448340 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.45□□□□□ -0.58
HLCS-205ENST00000448340 CHTOPQ9Y3Y2 248 aaKnown RBP11.45□□□□□ -0.58
HLCS-205ENST00000448340 SPAG11BQ08648 103 aa11.44□□□□□ -0.58
HLCS-205ENST00000448340 C9orf163Q8N9P6 203 aa11.44□□□□□ -0.58
HLCS-205ENST00000448340 LINC00526Q96FQ7 95 aa11.44□□□□□ -0.58
HLCS-205ENST00000448340 C2orf48Q96LS8 159 aa11.44□□□□□ -0.58
HLCS-205ENST00000448340 CHAC1Q9BUX1 264 aa11.44□□□□□ -0.58
HLCS-205ENST00000448340 KRTAP10-1P60331 282 aa11.43□□□□□ -0.58
HLCS-205ENST00000448340 F8VRH5 84 aa11.42□□□□□ -0.58
HLCS-205ENST00000448340 F8WDY8 70 aa11.42□□□□□ -0.58
HLCS-205ENST00000448340 H3BRM9 83 aa11.42□□□□□ -0.58
HLCS-205ENST00000448340 MAP1LC3CQ9BXW4 147 aa11.42□□□□□ -0.58
HLCS-205ENST00000448340 MYCBP2O75592 4640 aa11.42□□□□□ -0.58
HLCS-205ENST00000448340 SYCNQ0VAF6 134 aa11.41□□□□□ -0.58
HLCS-205ENST00000448340 LINC01620Q4KN68 170 aa11.41□□□□□ -0.58
HLCS-205ENST00000448340 MRPL35Q9NZE8 188 aaKnown RBP11.41□□□□□ -0.58
HLCS-205ENST00000448340 C11orf86A6NJI1 115 aa11.4□□□□□ -0.58
HLCS-205ENST00000448340 H0Y8G0 127 aa11.4□□□□□ -0.58
HLCS-205ENST00000448340 ZNF22P17026 224 aaPredicted RBP11.4□□□□□ -0.58
HLCS-205ENST00000448340 KIAA0087Q14695 138 aa11.4□□□□□ -0.58
HLCS-205ENST00000448340 ODF1Q14990 250 aa11.4□□□□□ -0.58
HLCS-205ENST00000448340 CARD19Q96LW7 228 aa11.4□□□□□ -0.58
HLCS-205ENST00000448340 CAMK2N2Q96S95 79 aa11.4□□□□□ -0.58
HLCS-205ENST00000448340 SMIM1B2RUZ4 78 aa11.39□□□□□ -0.59
HLCS-205ENST00000448340 EPM2AB3EWF7 344 aa11.39□□□□□ -0.59
HLCS-205ENST00000448340 S100A6P06703 90 aa11.38□□□□□ -0.59
HLCS-205ENST00000448340 PRSS2P07478 247 aa11.38□□□□□ -0.59
HLCS-205ENST00000448340 Q8IZM0 81 aa11.38□□□□□ -0.59
HLCS-205ENST00000448340 VPS13BQ7Z7G8 4022 aa11.37□□□□□ -0.59
HLCS-205ENST00000448340 NDUFA1O15239 70 aa11.37□□□□□ -0.59
HLCS-205ENST00000448340 SPINK8P0C7L1 97 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms