RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 H7C423 109 aa9.27□□□□□ -0.93
SHC1-210ENST00000448116 DEFB113Q30KQ7 82 aa9.26□□□□□ -0.93
SHC1-210ENST00000448116 LINC00242Q5T6M2 205 aa9.26□□□□□ -0.93
SHC1-210ENST00000448116 LRRC75A-AS1Q8N1F1 130 aa9.26□□□□□ -0.93
SHC1-210ENST00000448116 HERVK_113P63121 156 aa9.26□□□□□ -0.93
SHC1-210ENST00000448116 PIK3CD-AS1Q5SR53 167 aa9.26□□□□□ -0.93
SHC1-210ENST00000448116 PRIMA1Q86XR5 153 aa9.26□□□□□ -0.93
SHC1-210ENST00000448116 MRAPQ8TCY5 172 aa9.26□□□□□ -0.93
SHC1-210ENST00000448116 NOP10Q9NPE3 64 aaKnown RBP9.26□□□□□ -0.93
SHC1-210ENST00000448116 TIRAPP58753 221 aa9.25□□□□□ -0.93
SHC1-210ENST00000448116 NDUFA1O15239 70 aa9.25□□□□□ -0.93
SHC1-210ENST00000448116 FAM236DA0A1B0GTK5 79 aa9.25□□□□□ -0.93
SHC1-210ENST00000448116 FAM236CP0DP71 79 aa9.25□□□□□ -0.93
SHC1-210ENST00000448116 FN1P02751 2386 aaKnown RBP9.24□□□□□ -0.93
SHC1-210ENST00000448116 CR1P17927 2039 aa9.24□□□□□ -0.93
SHC1-210ENST00000448116 Q8N2B8 174 aa9.24□□□□□ -0.93
SHC1-210ENST00000448116 LINC00308Q8TCZ7 52 aa9.24□□□□□ -0.93
SHC1-210ENST00000448116 BBC3Q96PG8 261 aaPredicted RBP9.24□□□□□ -0.93
SHC1-210ENST00000448116 C9orf153Q5TBE3 101 aa9.24□□□□□ -0.93
SHC1-210ENST00000448116 NTM-AS1Q6ZSK4 140 aa9.24□□□□□ -0.93
SHC1-210ENST00000448116 TRGV2A0A075B6R0 118 aa9.24□□□□□ -0.93
SHC1-210ENST00000448116 CCL24O00175 119 aa9.24□□□□□ -0.93
SHC1-210ENST00000448116 WFDC10AQ9H1F0 79 aa9.24□□□□□ -0.93
SHC1-210ENST00000448116 K7EQD1 137 aa9.23□□□□□ -0.93
SHC1-210ENST00000448116 UBE2L6O14933 153 aa9.23□□□□□ -0.93
SHC1-210ENST00000448116 RETNQ9HD89 108 aa9.23□□□□□ -0.93
SHC1-210ENST00000448116 C15orf53Q8NAA6 179 aa9.23□□□□□ -0.93
SHC1-210ENST00000448116 TOMM7Q9P0U1 55 aa9.22□□□□□ -0.93
SHC1-210ENST00000448116 C2orf48Q96LS8 159 aa9.22□□□□□ -0.93
SHC1-210ENST00000448116 NIPBLQ6KC79 2804 aaeCLIP9.22□□□□□ -0.93
SHC1-210ENST00000448116 LOC100131303A0A0U1RQF7 123 aa9.22□□□□□ -0.93
SHC1-210ENST00000448116 SMIM1B2RUZ4 78 aa9.22□□□□□ -0.93
SHC1-210ENST00000448116 LST1O00453 97 aa9.22□□□□□ -0.93
SHC1-210ENST00000448116 ITPR3Q14573 2671 aa9.22□□□□□ -0.93
SHC1-210ENST00000448116 TIMM17BO60830 172 aa9.21□□□□□ -0.93
SHC1-210ENST00000448116 PLA2G2AP14555 144 aa9.21□□□□□ -0.93
SHC1-210ENST00000448116 FLNAP21333 2647 aaKnown RBP9.21□□□□□ -0.94
SHC1-210ENST00000448116 IGLV5-45A0A087WSX0 123 aa9.21□□□□□ -0.94
SHC1-210ENST00000448116 DNAJC9-AS1A6NH13 148 aa9.21□□□□□ -0.94
SHC1-210ENST00000448116 SOSTDC1Q6X4U4 206 aa9.21□□□□□ -0.94
SHC1-210ENST00000448116 H3BT86 120 aa9.2□□□□□ -0.94
SHC1-210ENST00000448116 IGLV5-39A0A0G2JS06 123 aa9.19□□□□□ -0.94
SHC1-210ENST00000448116 DAZ2Q13117 558 aaKnown RBP9.19□□□□□ -0.94
SHC1-210ENST00000448116 DAZ4Q86SG3 579 aaKnown RBP9.19□□□□□ -0.94
SHC1-210ENST00000448116 DAZ3Q9NR90 486 aaKnown RBP9.19□□□□□ -0.94
SHC1-210ENST00000448116 CDC42SE2Q9NRR3 84 aa9.19□□□□□ -0.94
SHC1-210ENST00000448116 WFDC11Q8NEX6 87 aa9.19□□□□□ -0.94
SHC1-210ENST00000448116 TMEM243Q9BU79 118 aa9.19□□□□□ -0.94
SHC1-210ENST00000448116 LINC00336Q6ZUF6 198 aa9.18□□□□□ -0.94
SHC1-210ENST00000448116 TRGV4A0A0C4DH28 118 aa9.18□□□□□ -0.94
SHC1-210ENST00000448116 TRBV10-1A0A0K0K1A3 114 aa9.18□□□□□ -0.94
SHC1-210ENST00000448116 HIST2H2BCQ6DN03 193 aa9.17□□□□□ -0.94
SHC1-210ENST00000448116 ESM1Q9NQ30 184 aa9.17□□□□□ -0.94
SHC1-210ENST00000448116 APCP25054 2843 aa9.17□□□□□ -0.94
SHC1-210ENST00000448116 DSCR8Q96T75 97 aa9.17□□□□□ -0.94
SHC1-210ENST00000448116 SETXQ7Z333 2677 aaKnown RBP9.16□□□□□ -0.94
SHC1-210ENST00000448116 ZNF843Q8N446 348 aa9.15□□□□□ -0.94
SHC1-210ENST00000448116 COX7A2LO14548 114 aa9.15□□□□□ -0.94
SHC1-210ENST00000448116 OXTP01178 125 aa9.14□□□□□ -0.95
SHC1-210ENST00000448116 LINC00158P58513 81 aa9.14□□□□□ -0.95
SHC1-210ENST00000448116 COPS9Q8WXC6 57 aa9.14□□□□□ -0.95
SHC1-210ENST00000448116 MIR7-3HGQ8N6C7 128 aa9.14□□□□□ -0.95
SHC1-210ENST00000448116 C11orf68Q9H3H3 251 aaKnown RBP9.14□□□□□ -0.95
SHC1-210ENST00000448116 GIG44P09565 113 aaPredicted RBP9.13□□□□□ -0.95
SHC1-210ENST00000448116 DEFB130BP0DP73 79 aa9.13□□□□□ -0.95
SHC1-210ENST00000448116 DEFB130AP0DP74 79 aa9.13□□□□□ -0.95
SHC1-210ENST00000448116 C5orf38Q86SI9 138 aa9.13□□□□□ -0.95
SHC1-210ENST00000448116 PRO0628Q9UI54 55 aa9.13□□□□□ -0.95
SHC1-210ENST00000448116 BAALC-AS2P0C853 105 aa9.12□□□□□ -0.95
SHC1-210ENST00000448116 PFN2P35080 140 aa9.12□□□□□ -0.95
SHC1-210ENST00000448116 Q9HAA7 133 aa9.12□□□□□ -0.95
SHC1-210ENST00000448116 IGLV4-60A0A075B6I1 120 aa9.12□□□□□ -0.95
SHC1-210ENST00000448116 KRTAP1-3Q8IUG1 177 aa9.12□□□□□ -0.95
SHC1-210ENST00000448116 TMEM86BQ8N661 226 aa9.12□□□□□ -0.95
SHC1-210ENST00000448116 COX7B2Q8TF08 81 aa9.12□□□□□ -0.95
SHC1-210ENST00000448116 C16orf74Q96GX8 76 aa9.12□□□□□ -0.95
SHC1-210ENST00000448116 LINC01600Q96MT4 127 aa9.12□□□□□ -0.95
SHC1-210ENST00000448116 FASNP49327 2511 aaKnown RBP9.11□□□□□ -0.95
SHC1-210ENST00000448116 ZNF469Q96JG9 3925 aaPredicted RBP9.11□□□□□ -0.95
SHC1-210ENST00000448116 UBR5O95071 2799 aaPredicted RBP9.11□□□□□ -0.95
SHC1-210ENST00000448116 CRPP02741 224 aa9.11□□□□□ -0.95
SHC1-210ENST00000448116 MALP21145 153 aa9.11□□□□□ -0.95
SHC1-210ENST00000448116 LINC01006Q8NI28 216 aa9.11□□□□□ -0.95
SHC1-210ENST00000448116 C1orf195Q5TG92 126 aa9.11□□□□□ -0.95
SHC1-210ENST00000448116 Q5XG85 94 aa9.11□□□□□ -0.95
SHC1-210ENST00000448116 FAM218AQ96MZ4 157 aa9.11□□□□□ -0.95
SHC1-210ENST00000448116 SND1-IT1Q9HBX3 110 aa9.1□□□□□ -0.95
SHC1-210ENST00000448116 PLAC8L1A1L4L8 177 aa9.1□□□□□ -0.95
SHC1-210ENST00000448116 GAGE2AQ6NT46 116 aa9.1□□□□□ -0.95
SHC1-210ENST00000448116 NBEAL2Q6ZNJ1 2754 aa9.09□□□□□ -0.95
SHC1-210ENST00000448116 HIVEP2P31629 2446 aa9.09□□□□□ -0.95
SHC1-210ENST00000448116 A0A096LPF7 62 aa9.08□□□□□ -0.96
SHC1-210ENST00000448116 TRBV6-4A0A1B0GX49 114 aa9.08□□□□□ -0.96
SHC1-210ENST00000448116 FAM19A3Q7Z5A8 133 aa9.08□□□□□ -0.96
SHC1-210ENST00000448116 CLPSL2Q6UWE3 100 aa9.08□□□□□ -0.96
SHC1-210ENST00000448116 NOTCH2Q04721 2471 aa9.08□□□□□ -0.96
SHC1-210ENST00000448116 TRBV6-8A0A0A6YYG3 113 aa9.08□□□□□ -0.96
SHC1-210ENST00000448116 LINC00337Q8N6G1 96 aa9.07□□□□□ -0.96
SHC1-210ENST00000448116 TRAV13-2A0A0B4J235 113 aa9.07□□□□□ -0.96
SHC1-210ENST00000448116 hADV29S1A0JD25 119 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms