RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 UBE2D1P51668 147 aa8.68□□□□□ -1.02
HLA-DOB-207ENST00000447394 COX6A2Q02221 97 aa8.68□□□□□ -1.02
HLA-DOB-207ENST00000447394 LINC01620Q4KN68 170 aa8.68□□□□□ -1.02
HLA-DOB-207ENST00000447394 HIGD2BQ4VC39 106 aa8.68□□□□□ -1.02
HLA-DOB-207ENST00000447394 CD164L2Q6UWJ8 174 aa8.68□□□□□ -1.02
HLA-DOB-207ENST00000447394 C5orf38Q86SI9 138 aa8.68□□□□□ -1.02
HLA-DOB-207ENST00000447394 NTN5Q8WTR8 489 aaPredicted RBP8.68□□□□□ -1.02
HLA-DOB-207ENST00000447394 VCX2Q9H322 139 aa8.68□□□□□ -1.02
HLA-DOB-207ENST00000447394 C16orf90A8MZG2 172 aa8.67□□□□□ -1.02
HLA-DOB-207ENST00000447394 HSBP1O75506 76 aa8.67□□□□□ -1.02
HLA-DOB-207ENST00000447394 LINC00242Q5T6M2 205 aa8.67□□□□□ -1.02
HLA-DOB-207ENST00000447394 LINC00526Q96FQ7 95 aa8.67□□□□□ -1.02
HLA-DOB-207ENST00000447394 C2orf88Q9BSF0 95 aa8.67□□□□□ -1.02
HLA-DOB-207ENST00000447394 IGLV5-52A0A0A0MRZ9 124 aa8.66□□□□□ -1.02
HLA-DOB-207ENST00000447394 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.66□□□□□ -1.02
HLA-DOB-207ENST00000447394 NPSP0C0P6 89 aa8.66□□□□□ -1.02
HLA-DOB-207ENST00000447394 A0A0J9YXV3 536 aa8.65□□□□□ -1.02
HLA-DOB-207ENST00000447394 hDV102S1A0JD36 115 aa8.65□□□□□ -1.02
HLA-DOB-207ENST00000447394 COX7A2LO14548 114 aa8.65□□□□□ -1.02
HLA-DOB-207ENST00000447394 CST9LQ9H4G1 147 aa8.65□□□□□ -1.02
HLA-DOB-207ENST00000447394 IGHV3OR16-9A0A0B4J2B5 98 aa8.64□□□□□ -1.03
HLA-DOB-207ENST00000447394 NDUFA6P56556 154 aa8.64□□□□□ -1.03
HLA-DOB-207ENST00000447394 DNAH8Q96JB1 4490 aa8.64□□□□□ -1.03
HLA-DOB-207ENST00000447394 APOBP04114 4563 aaKnown RBP8.63□□□□□ -1.03
HLA-DOB-207ENST00000447394 LINC01549A6NIU2 74 aa8.63□□□□□ -1.03
HLA-DOB-207ENST00000447394 SLPIP03973 132 aa8.63□□□□□ -1.03
HLA-DOB-207ENST00000447394 MALP21145 153 aa8.63□□□□□ -1.03
HLA-DOB-207ENST00000447394 KRTAP10-1P60331 282 aa8.63□□□□□ -1.03
HLA-DOB-207ENST00000447394 PMVKQ15126 192 aa8.63□□□□□ -1.03
HLA-DOB-207ENST00000447394 PAPPA-AS1Q5QFB9 102 aa8.63□□□□□ -1.03
HLA-DOB-207ENST00000447394 GVQW2A0A096LPI5 108 aaPredicted RBP8.62□□□□□ -1.03
HLA-DOB-207ENST00000447394 IGHV1-58A0A0C4DH39 117 aa8.62□□□□□ -1.03
HLA-DOB-207ENST00000447394 C14orf177Q52M58 125 aa8.62□□□□□ -1.03
HLA-DOB-207ENST00000447394 FAM19A3Q7Z5A8 133 aa8.62□□□□□ -1.03
HLA-DOB-207ENST00000447394 LINC00518Q8N0U6 118 aa8.62□□□□□ -1.03
HLA-DOB-207ENST00000447394 PGPEP1Q9NXJ5 209 aa8.62□□□□□ -1.03
HLA-DOB-207ENST00000447394 KIAA1109Q2LD37 5005 aa8.61□□□□□ -1.03
HLA-DOB-207ENST00000447394 ATP5LO75964 103 aa8.61□□□□□ -1.03
HLA-DOB-207ENST00000447394 FABP4P15090 132 aa8.61□□□□□ -1.03
HLA-DOB-207ENST00000447394 CDPF1Q6NVV7 123 aa8.61□□□□□ -1.03
HLA-DOB-207ENST00000447394 IFI27L1Q96BM0 104 aa8.61□□□□□ -1.03
HLA-DOB-207ENST00000447394 CDKN2A-AS1Q9UH64 79 aa8.61□□□□□ -1.03
HLA-DOB-207ENST00000447394 IGLV4-69A0A075B6H9 119 aa8.6□□□□□ -1.03
HLA-DOB-207ENST00000447394 A0A087WZ39 114 aa8.6□□□□□ -1.03
HLA-DOB-207ENST00000447394 H0Y8G0 127 aa8.6□□□□□ -1.03
HLA-DOB-207ENST00000447394 GCSHP23434 173 aa8.6□□□□□ -1.03
HLA-DOB-207ENST00000447394 CFAP161Q6P656 301 aa8.6□□□□□ -1.03
HLA-DOB-207ENST00000447394 ORAOV1Q8WV07 137 aa8.6□□□□□ -1.03
HLA-DOB-207ENST00000447394 RYR1P21817 5038 aa8.6□□□□□ -1.03
HLA-DOB-207ENST00000447394 IGHV3-64A0A075B6Q5 118 aa8.59□□□□□ -1.03
HLA-DOB-207ENST00000447394 TINCRA0A1B0GVN0 87 aa8.59□□□□□ -1.03
HLA-DOB-207ENST00000447394 LEPROTL1O95214 131 aa8.59□□□□□ -1.03
HLA-DOB-207ENST00000447394 HAMPP81172 84 aa8.59□□□□□ -1.03
HLA-DOB-207ENST00000447394 SPAG11BQ08648 103 aa8.59□□□□□ -1.03
HLA-DOB-207ENST00000447394 LINC00469Q8N7U9 141 aa8.59□□□□□ -1.03
HLA-DOB-207ENST00000447394 CHAC1Q9BUX1 264 aa8.59□□□□□ -1.03
HLA-DOB-207ENST00000447394 GEMIN7Q9H840 131 aaKnown RBP8.59□□□□□ -1.03
HLA-DOB-207ENST00000447394 HERVK_113P63121 156 aa8.58□□□□□ -1.04
HLA-DOB-207ENST00000447394 C11orf86A6NJI1 115 aa8.57□□□□□ -1.04
HLA-DOB-207ENST00000447394 IGLC3P0DOY3 106 aa8.57□□□□□ -1.04
HLA-DOB-207ENST00000447394 CNBPP62633 177 aaKnown RBP8.57□□□□□ -1.04
HLA-DOB-207ENST00000447394 COA6Q5JTJ3 125 aaKnown RBP8.57□□□□□ -1.04
HLA-DOB-207ENST00000447394 FAM30AQ9NZY2 134 aa8.57□□□□□ -1.04
HLA-DOB-207ENST00000447394 CHTOPQ9Y3Y2 248 aaKnown RBP8.57□□□□□ -1.04
HLA-DOB-207ENST00000447394 IGLV5-45A0A087WSX0 123 aa8.56□□□□□ -1.04
HLA-DOB-207ENST00000447394 ZNF561-AS1K7EIQ3 104 aa8.56□□□□□ -1.04
HLA-DOB-207ENST00000447394 APOMO95445 188 aa8.56□□□□□ -1.04
HLA-DOB-207ENST00000447394 SPINK8P0C7L1 97 aa8.56□□□□□ -1.04
HLA-DOB-207ENST00000447394 ZNF22P17026 224 aaPredicted RBP8.56□□□□□ -1.04
HLA-DOB-207ENST00000447394 OR10D4PQ8NGN7 298 aa8.56□□□□□ -1.04
HLA-DOB-207ENST00000447394 MRPL35Q9NZE8 188 aaKnown RBP8.56□□□□□ -1.04
HLA-DOB-207ENST00000447394 HSPG2P98160 4391 aa8.55□□□□□ -1.04
HLA-DOB-207ENST00000447394 SMIM1B2RUZ4 78 aa8.55□□□□□ -1.04
HLA-DOB-207ENST00000447394 SEC11AP67812 179 aa8.55□□□□□ -1.04
HLA-DOB-207ENST00000447394 KIAA0087Q14695 138 aa8.55□□□□□ -1.04
HLA-DOB-207ENST00000447394 Q6ZRU5 148 aa8.55□□□□□ -1.04
HLA-DOB-207ENST00000447394 C9orf163Q8N9P6 203 aa8.55□□□□□ -1.04
HLA-DOB-207ENST00000447394 PMCHL2Q9BQD1 86 aa8.55□□□□□ -1.04
HLA-DOB-207ENST00000447394 TOMM7Q9P0U1 55 aa8.55□□□□□ -1.04
HLA-DOB-207ENST00000447394 TRAV12-1A0A0B4J245 112 aa8.54□□□□□ -1.04
HLA-DOB-207ENST00000447394 SYCNQ0VAF6 134 aa8.54□□□□□ -1.04
HLA-DOB-207ENST00000447394 ODF1Q14990 250 aa8.54□□□□□ -1.04
HLA-DOB-207ENST00000447394 C10orf25Q5T742 122 aa8.54□□□□□ -1.04
HLA-DOB-207ENST00000447394 C2orf82Q6UX34 121 aa8.54□□□□□ -1.04
HLA-DOB-207ENST00000447394 CARD19Q96LW7 228 aa8.54□□□□□ -1.04
HLA-DOB-207ENST00000447394 CAMK2N2Q96S95 79 aa8.54□□□□□ -1.04
HLA-DOB-207ENST00000447394 HSPB8Q9UJY1 196 aa8.54□□□□□ -1.04
HLA-DOB-207ENST00000447394 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.53□□□□□ -1.04
HLA-DOB-207ENST00000447394 PANO1I0J062 215 aa8.53□□□□□ -1.04
HLA-DOB-207ENST00000447394 PACRGQ96M98 296 aaPredicted RBP8.53□□□□□ -1.04
HLA-DOB-207ENST00000447394 F8VRH5 84 aa8.52□□□□□ -1.05
HLA-DOB-207ENST00000447394 CHTF8P0CG12 524 aa8.52□□□□□ -1.05
HLA-DOB-207ENST00000447394 TMEM170BQ5T4T1 132 aa8.52□□□□□ -1.05
HLA-DOB-207ENST00000447394 UNQ6190/PRO20217Q6UXQ8 127 aa8.52□□□□□ -1.05
HLA-DOB-207ENST00000447394 LINC01561Q8N1V8 128 aa8.52□□□□□ -1.05
HLA-DOB-207ENST00000447394 HERC2O95714 4834 aa8.51□□□□□ -1.05
HLA-DOB-207ENST00000447394 SDIM1Q6ZPB5 146 aa8.51□□□□□ -1.05
HLA-DOB-207ENST00000447394 C2orf48Q96LS8 159 aa8.51□□□□□ -1.05
HLA-DOB-207ENST00000447394 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.51□□□□□ -1.05
HLA-DOB-207ENST00000447394 H3BRM9 83 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms