RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 CTSGP08311 255 aa2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 RNASE3P12724 160 aaKnown RBP2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 PDE6GP18545 87 aa2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 PMAIP1Q13794 54 aa2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 VMO1Q7Z5L0 202 aa2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 GPHB5Q86YW7 130 aa2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 FAM223AQ8IWN6 122 aa2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 ZFAND2AQ8N6M9 145 aa2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 OBSCN-AS1Q96MR7 158 aa2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 CYSTM1Q9H1C7 97 aa2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 MED13Q9UHV7 2174 aa2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 CUL9Q8IWT3 2517 aa2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 TRAV23DV6A0A075B6W5 121 aa2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 A0A087WVE0 104 aa2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 F8WEM9 126 aa2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 CHTF8P0CG12 524 aa2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 CCL4P13236 92 aa2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 SNRPD3P62318 126 aaKnown RBP2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 PRR9Q5T870 116 aa2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 MINOS1Q5TGZ0 78 aa2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 ZGRF1Q86YA3 2104 aa2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 ITLN2Q8WWU7 325 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 LINC00846Q9NV44 126 aa2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 MINOS1-NBL1R4GNA1 71 aa2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 S4R3C0 116 aa2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 WDR87Q6ZQQ6 2873 aa2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 PANO1I0J062 215 aa2.93□□□□□ -1.94
HMGB1P16-201ENST00000447155 TMEM256-PLSCR3K7ERE1 68 aa2.93□□□□□ -1.94
HMGB1P16-201ENST00000447155 M0QY20 66 aa2.93□□□□□ -1.94
HMGB1P16-201ENST00000447155 NDUFA4O00483 81 aa2.93□□□□□ -1.94
HMGB1P16-201ENST00000447155 INSP01308 110 aa2.93□□□□□ -1.94
HMGB1P16-201ENST00000447155 MIFP14174 115 aa2.93□□□□□ -1.94
HMGB1P16-201ENST00000447155 ESRGQ1W209 222 aa2.93□□□□□ -1.94
HMGB1P16-201ENST00000447155 KLK9Q2XQG4 91 aa2.93□□□□□ -1.94
HMGB1P16-201ENST00000447155 CCL17Q92583 94 aa2.93□□□□□ -1.94
HMGB1P16-201ENST00000447155 KLK9Q9UKQ9 250 aa2.93□□□□□ -1.94
HMGB1P16-201ENST00000447155 H3BUA1 57 aa2.92□□□□□ -1.94
HMGB1P16-201ENST00000447155 LECT2O14960 151 aa2.92□□□□□ -1.94
HMGB1P16-201ENST00000447155 PRB4P10163 310 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P16-201ENST00000447155 DAD1P61803 113 aa2.92□□□□□ -1.94
HMGB1P16-201ENST00000447155 UBE2BP63146 152 aa2.92□□□□□ -1.94
HMGB1P16-201ENST00000447155 ENHOQ6UWT2 76 aa2.92□□□□□ -1.94
HMGB1P16-201ENST00000447155 CLEC19AQ6UXS0 136 aa2.92□□□□□ -1.94
HMGB1P16-201ENST00000447155 Q6ZRU5 148 aa2.92□□□□□ -1.94
HMGB1P16-201ENST00000447155 Q8N2B8 174 aa2.92□□□□□ -1.94
HMGB1P16-201ENST00000447155 RNASE6Q93091 150 aaKnown RBP2.92□□□□□ -1.94
HMGB1P16-201ENST00000447155 C16orf95Q9H693 158 aa2.92□□□□□ -1.94
HMGB1P16-201ENST00000447155 SND1-IT1Q9HBX3 110 aa2.92□□□□□ -1.94
HMGB1P16-201ENST00000447155 PLCE1Q9P212 2302 aa2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 IGHV3-66A0A0C4DH42 116 aa2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 CLPSL1A2RUU4 121 aa2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 ODF3BA8MYP8 253 aa2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 IBA57-AS1B1ANH7 110 aa2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 FUSP35637 526 aaKnown RBP eCLIP2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 NBL1P41271 181 aa2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 LINC00315P59091 139 aa2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 KIAA0087Q14695 138 aa2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 LYPD5Q6UWN5 251 aa2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 FP248Q71RG6 208 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 FAM19A3Q7Z5A8 133 aa2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 FAM186AA6NE01 2351 aa2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 ARFGEF3Q5TH69 2177 aa2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 MUC4Q99102 2169 aa2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 IGHV3OR16-8A0A075B7F1 116 aa2.9□□□□□ -1.95
HMGB1P16-201ENST00000447155 LOC110117498A0A087WWA1 95 aa2.9□□□□□ -1.95
HMGB1P16-201ENST00000447155 CCL21O00585 134 aa2.9□□□□□ -1.95
HMGB1P16-201ENST00000447155 NCR3O14931 201 aa2.9□□□□□ -1.95
HMGB1P16-201ENST00000447155 UBE2L6O14933 153 aa2.9□□□□□ -1.95
HMGB1P16-201ENST00000447155 NREPQ16612 68 aa2.9□□□□□ -1.95
HMGB1P16-201ENST00000447155 LYPD2Q6UXB3 125 aa2.9□□□□□ -1.95
HMGB1P16-201ENST00000447155 FAM19A1Q7Z5A9 133 aa2.9□□□□□ -1.95
HMGB1P16-201ENST00000447155 MIR7-3HGQ8N6C7 128 aa2.9□□□□□ -1.95
HMGB1P16-201ENST00000447155 Q8N6K4 173 aa2.9□□□□□ -1.95
HMGB1P16-201ENST00000447155 TMEM254Q8TBM7 123 aa2.9□□□□□ -1.95
HMGB1P16-201ENST00000447155 USMG5Q96IX5 58 aa2.9□□□□□ -1.95
HMGB1P16-201ENST00000447155 CDKN2A-AS1Q9UH64 79 aa2.9□□□□□ -1.95
HMGB1P16-201ENST00000447155 TRANK1O15050 2925 aa2.89□□□□□ -1.95
HMGB1P16-201ENST00000447155 IGHV3-74A0A0B4J1X5 117 aa2.89□□□□□ -1.95
HMGB1P16-201ENST00000447155 TRBV7-4A0A0J9YYF1 115 aa2.89□□□□□ -1.95
HMGB1P16-201ENST00000447155 GNRH2O43555 120 aa2.89□□□□□ -1.95
HMGB1P16-201ENST00000447155 BSPH1Q075Z2 132 aa2.89□□□□□ -1.95
HMGB1P16-201ENST00000447155 ZNF625Q96I27 306 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P16-201ENST00000447155 LINC00167Q96N53 147 aa2.89□□□□□ -1.95
HMGB1P16-201ENST00000447155 RETNQ9HD89 108 aa2.89□□□□□ -1.95
HMGB1P16-201ENST00000447155 SNURFQ9Y675 71 aa2.89□□□□□ -1.95
HMGB1P16-201ENST00000447155 HTTP42858 3142 aa2.88□□□□□ -1.95
HMGB1P16-201ENST00000447155 IGHV3-49A0A0A0MS15 119 aa2.88□□□□□ -1.95
HMGB1P16-201ENST00000447155 NDUFS5O43920 106 aa2.88□□□□□ -1.95
HMGB1P16-201ENST00000447155 KRTAP5-9P26371 169 aa2.88□□□□□ -1.95
HMGB1P16-201ENST00000447155 UBE2AP49459 152 aa2.88□□□□□ -1.95
HMGB1P16-201ENST00000447155 LINC00158P58513 81 aa2.88□□□□□ -1.95
HMGB1P16-201ENST00000447155 KTN1-AS1Q86SY8 53 aa2.88□□□□□ -1.95
HMGB1P16-201ENST00000447155 KRTAP11-1Q8IUC1 163 aa2.88□□□□□ -1.95
HMGB1P16-201ENST00000447155 LINC00337Q8N6G1 96 aa2.88□□□□□ -1.95
HMGB1P16-201ENST00000447155 MUC7Q8TAX7 377 aa2.88□□□□□ -1.95
HMGB1P16-201ENST00000447155 SMIM11BQ8TCY0 68 aa2.88□□□□□ -1.95
HMGB1P16-201ENST00000447155 COX7B2Q8TF08 81 aa2.88□□□□□ -1.95
HMGB1P16-201ENST00000447155 RMI2Q96E14 147 aa2.88□□□□□ -1.95
HMGB1P16-201ENST00000447155 CEP350Q5VT06 3117 aa2.88□□□□□ -1.95
HMGB1P16-201ENST00000447155 URB1O60287 2271 aaKnown RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms