RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 UBE2D1P51668 147 aa14.28□□□□□ -0.12
APOE-204ENST00000446996 LINC00242Q5T6M2 205 aa14.27□□□□□ -0.13
APOE-204ENST00000446996 CHCHD1Q96BP2 118 aaKnown RBP14.27□□□□□ -0.13
APOE-204ENST00000446996 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.26□□□□□ -0.13
APOE-204ENST00000446996 APOMO95445 188 aa14.26□□□□□ -0.13
APOE-204ENST00000446996 MALP21145 153 aa14.26□□□□□ -0.13
APOE-204ENST00000446996 DNAH8Q96JB1 4490 aa14.25□□□□□ -0.13
APOE-204ENST00000446996 A0A096LNJ9 63 aa14.25□□□□□ -0.13
APOE-204ENST00000446996 HBDP02042 147 aa14.25□□□□□ -0.13
APOE-204ENST00000446996 SEC11AP67812 179 aa14.25□□□□□ -0.13
APOE-204ENST00000446996 APOBP04114 4563 aaKnown RBP14.24□□□□□ -0.13
APOE-204ENST00000446996 C5orf38Q86SI9 138 aa14.24□□□□□ -0.13
APOE-204ENST00000446996 LINC01561Q8N1V8 128 aa14.24□□□□□ -0.13
APOE-204ENST00000446996 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.23□□□□□ -0.13
APOE-204ENST00000446996 SCO1O75880 301 aa14.23□□□□□ -0.13
APOE-204ENST00000446996 SLPIP03973 132 aa14.23□□□□□ -0.13
APOE-204ENST00000446996 S100A1P23297 94 aa14.23□□□□□ -0.13
APOE-204ENST00000446996 HIGD2BQ4VC39 106 aa14.23□□□□□ -0.13
APOE-204ENST00000446996 A0A087WZ39 114 aa14.22□□□□□ -0.13
APOE-204ENST00000446996 ZNF561-AS1K7EIQ3 104 aa14.22□□□□□ -0.13
APOE-204ENST00000446996 ZC2HC1BQ5TFG8 222 aa14.22□□□□□ -0.13
APOE-204ENST00000446996 Q6ZSA8 131 aa14.22□□□□□ -0.13
APOE-204ENST00000446996 HSPG2P98160 4391 aa14.22□□□□□ -0.13
APOE-204ENST00000446996 PDZD11Q5EBL8 140 aa14.21□□□□□ -0.13
APOE-204ENST00000446996 OR10D4PQ8NGN7 298 aa14.21□□□□□ -0.13
APOE-204ENST00000446996 ABCA13Q86UQ4 5058 aa14.2□□□□□ -0.14
APOE-204ENST00000446996 IGHV3-64A0A075B6Q5 118 aa14.2□□□□□ -0.14
APOE-204ENST00000446996 XGP55808 180 aa14.2□□□□□ -0.14
APOE-204ENST00000446996 HERVK_113P63121 156 aa14.2□□□□□ -0.14
APOE-204ENST00000446996 COX6A2Q02221 97 aa14.2□□□□□ -0.14
APOE-204ENST00000446996 PMVKQ15126 192 aa14.2□□□□□ -0.14
APOE-204ENST00000446996 BAGE3Q86Y29 109 aa14.2□□□□□ -0.14
APOE-204ENST00000446996 F8WDY8 70 aa14.19□□□□□ -0.14
APOE-204ENST00000446996 ATP5LO75964 103 aa14.19□□□□□ -0.14
APOE-204ENST00000446996 C2orf48Q96LS8 159 aa14.19□□□□□ -0.14
APOE-204ENST00000446996 CST9LQ9H4G1 147 aa14.19□□□□□ -0.14
APOE-204ENST00000446996 LINC01620Q4KN68 170 aa14.18□□□□□ -0.14
APOE-204ENST00000446996 FAM30AQ9NZY2 134 aa14.18□□□□□ -0.14
APOE-204ENST00000446996 SDIM1Q6ZPB5 146 aa14.17□□□□□ -0.14
APOE-204ENST00000446996 TINCRA0A1B0GVN0 87 aa14.16□□□□□ -0.14
APOE-204ENST00000446996 HSBP1O75506 76 aa14.16□□□□□ -0.14
APOE-204ENST00000446996 PMCHL1Q16048 86 aa14.16□□□□□ -0.14
APOE-204ENST00000446996 PKIGQ9Y2B9 76 aa14.16□□□□□ -0.14
APOE-204ENST00000446996 IGLV4-69A0A075B6H9 119 aa14.15□□□□□ -0.14
APOE-204ENST00000446996 SYCNQ0VAF6 134 aa14.15□□□□□ -0.14
APOE-204ENST00000446996 ORAOV1Q8WV07 137 aa14.15□□□□□ -0.14
APOE-204ENST00000446996 GEMIN7Q9H840 131 aaKnown RBP14.15□□□□□ -0.14
APOE-204ENST00000446996 A0A0J9YXV3 536 aa14.14□□□□□ -0.15
APOE-204ENST00000446996 SPAG11BQ08648 103 aa14.14□□□□□ -0.15
APOE-204ENST00000446996 LINC00526Q96FQ7 95 aa14.13□□□□□ -0.15
APOE-204ENST00000446996 CARD19Q96LW7 228 aa14.13□□□□□ -0.15
APOE-204ENST00000446996 IGLV5-45A0A087WSX0 123 aa14.12□□□□□ -0.15
APOE-204ENST00000446996 ATP6V1G1O75348 118 aa14.12□□□□□ -0.15
APOE-204ENST00000446996 CAMK2N2Q96S95 79 aa14.12□□□□□ -0.15
APOE-204ENST00000446996 RNF151Q2KHN1 245 aa14.11□□□□□ -0.15
APOE-204ENST00000446996 CHAC1Q9BUX1 264 aa14.11□□□□□ -0.15
APOE-204ENST00000446996 CDKN2A-AS1Q9UH64 79 aa14.11□□□□□ -0.15
APOE-204ENST00000446996 SERF1AO75920 110 aa14.1□□□□□ -0.15
APOE-204ENST00000446996 LINC00310P59036 64 aa14.1□□□□□ -0.15
APOE-204ENST00000446996 CIRBPQ14011 172 aaKnown RBP14.1□□□□□ -0.15
APOE-204ENST00000446996 KIAA0087Q14695 138 aa14.1□□□□□ -0.15
APOE-204ENST00000446996 IGLC3P0DOY3 106 aa14.09□□□□□ -0.15
APOE-204ENST00000446996 Q6ZRU5 148 aa14.09□□□□□ -0.15
APOE-204ENST00000446996 IFI27L1Q96BM0 104 aa14.09□□□□□ -0.15
APOE-204ENST00000446996 NDUFA1O15239 70 aa14.08□□□□□ -0.16
APOE-204ENST00000446996 Q8N1X5 172 aa14.08□□□□□ -0.16
APOE-204ENST00000446996 MRPL35Q9NZE8 188 aaKnown RBP14.08□□□□□ -0.16
APOE-204ENST00000446996 TRAV12-1A0A0B4J245 112 aa14.07□□□□□ -0.16
APOE-204ENST00000446996 HIST1H2BKO60814 126 aa14.07□□□□□ -0.16
APOE-204ENST00000446996 HIST1H2BJP06899 126 aa14.07□□□□□ -0.16
APOE-204ENST00000446996 HIST1H2BOP23527 126 aa14.07□□□□□ -0.16
APOE-204ENST00000446996 HIST1H2BBP33778 126 aa14.07□□□□□ -0.16
APOE-204ENST00000446996 NDUFA6P56556 154 aa14.07□□□□□ -0.16
APOE-204ENST00000446996 HIST1H2BDP58876 126 aa14.07□□□□□ -0.16
APOE-204ENST00000446996 HIST1H2BCP62807 126 aa14.07□□□□□ -0.16
APOE-204ENST00000446996 HIST2H2BEQ16778 126 aa14.07□□□□□ -0.16
APOE-204ENST00000446996 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.07□□□□□ -0.16
APOE-204ENST00000446996 FAM19A2Q8N3H0 131 aa14.07□□□□□ -0.16
APOE-204ENST00000446996 LINC00469Q8N7U9 141 aa14.07□□□□□ -0.16
APOE-204ENST00000446996 HIST1H2BHQ93079 126 aa14.07□□□□□ -0.16
APOE-204ENST00000446996 PACRGQ96M98 296 aaPredicted RBP14.07□□□□□ -0.16
APOE-204ENST00000446996 HIST1H2BNQ99877 126 aa14.07□□□□□ -0.16
APOE-204ENST00000446996 HIST1H2BMQ99879 126 aa14.07□□□□□ -0.16
APOE-204ENST00000446996 Q8IZM0 81 aa14.06□□□□□ -0.16
APOE-204ENST00000446996 SCXQ7RTU7 201 aa14.05□□□□□ -0.16
APOE-204ENST00000446996 H3BRM9 83 aa14.04□□□□□ -0.16
APOE-204ENST00000446996 NUPR1O60356 82 aa14.04□□□□□ -0.16
APOE-204ENST00000446996 LEPROTL1O95214 131 aa14.04□□□□□ -0.16
APOE-204ENST00000446996 CIRBP-AS1Q8TBR5 109 aa14.04□□□□□ -0.16
APOE-204ENST00000446996 LINC00474Q9P2X8 69 aa14.04□□□□□ -0.16
APOE-204ENST00000446996 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.04□□□□□ -0.16
APOE-204ENST00000446996 LOC107984640A0A0U1RRK4 108 aa14.03□□□□□ -0.16
APOE-204ENST00000446996 PRSS2P07478 247 aa14.03□□□□□ -0.16
APOE-204ENST00000446996 SMIM1B2RUZ4 78 aa14.02□□□□□ -0.17
APOE-204ENST00000446996 C6orf226Q5I0X4 101 aa14.02□□□□□ -0.17
APOE-204ENST00000446996 SPACA4Q8TDM5 124 aa14.02□□□□□ -0.17
APOE-204ENST00000446996 KRTAP4-5Q9BYR2 181 aa14.02□□□□□ -0.17
APOE-204ENST00000446996 CHTOPQ9Y3Y2 248 aaKnown RBP14.02□□□□□ -0.17
APOE-204ENST00000446996 TRBV30A0A0K0K1B3 111 aa14.01□□□□□ -0.17
APOE-204ENST00000446996 HSPB8Q9UJY1 196 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms