RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 IGLV5-39A0A0G2JS06 123 aa12.16□□□□□ -0.46
SMC6-206ENST00000446852 FABP2P12104 132 aa12.15□□□□□ -0.46
SMC6-206ENST00000446852 EGFEM1PQ0D2K5 195 aa12.15□□□□□ -0.46
SMC6-206ENST00000446852 SMIM1B2RUZ4 78 aa12.15□□□□□ -0.46
SMC6-206ENST00000446852 TMEM238C9JI98 176 aa12.14□□□□□ -0.47
SMC6-206ENST00000446852 F5H768 121 aa12.14□□□□□ -0.47
SMC6-206ENST00000446852 SPCS1Q9Y6A9 102 aa12.14□□□□□ -0.47
SMC6-206ENST00000446852 GTF2H5Q6ZYL4 71 aa12.14□□□□□ -0.47
SMC6-206ENST00000446852 SPART-AS1P0CW21 52 aa12.13□□□□□ -0.47
SMC6-206ENST00000446852 APOMO95445 188 aa12.13□□□□□ -0.47
SMC6-206ENST00000446852 ATP5G1P05496 136 aa12.13□□□□□ -0.47
SMC6-206ENST00000446852 IGKV3OR2-268A0A0C4DH90 116 aa12.12□□□□□ -0.47
SMC6-206ENST00000446852 ADAMTSL4-AS1Q5T5F5 129 aa12.12□□□□□ -0.47
SMC6-206ENST00000446852 CFC1BP0CG36 223 aa12.12□□□□□ -0.47
SMC6-206ENST00000446852 CFC1P0CG37 223 aa12.12□□□□□ -0.47
SMC6-206ENST00000446852 MUSTN1Q8IVN3 82 aa12.12□□□□□ -0.47
SMC6-206ENST00000446852 TRAV26-1A0A087WT03 109 aa12.11□□□□□ -0.47
SMC6-206ENST00000446852 NDUFA1O15239 70 aa12.11□□□□□ -0.47
SMC6-206ENST00000446852 RETNQ9HD89 108 aa12.11□□□□□ -0.47
SMC6-206ENST00000446852 PGPEP1Q9NXJ5 209 aa12.11□□□□□ -0.47
SMC6-206ENST00000446852 NOTCH1P46531 2555 aa12.11□□□□□ -0.47
SMC6-206ENST00000446852 TENM3Q9P273 2699 aa12.11□□□□□ -0.47
SMC6-206ENST00000446852 A4D1N5 150 aa12.1□□□□□ -0.47
SMC6-206ENST00000446852 EIF4EBP3O60516 100 aaPredicted RBP12.1□□□□□ -0.47
SMC6-206ENST00000446852 TSPAN13O95857 204 aa12.09□□□□□ -0.47
SMC6-206ENST00000446852 HTN3P15516 51 aa12.09□□□□□ -0.47
SMC6-206ENST00000446852 G3V4G9 280 aa12.08□□□□□ -0.48
SMC6-206ENST00000446852 RBX1P62877 108 aa12.08□□□□□ -0.48
SMC6-206ENST00000446852 SPANXDQ9BXN6 97 aa12.08□□□□□ -0.48
SMC6-206ENST00000446852 Q9H8V8 135 aa12.08□□□□□ -0.48
SMC6-206ENST00000446852 SPANXCQ9NY87 97 aa12.08□□□□□ -0.48
SMC6-206ENST00000446852 TMEM262E9PQX1 116 aa12.08□□□□□ -0.48
SMC6-206ENST00000446852 A0A1B0GUV1 79 aa12.07□□□□□ -0.48
SMC6-206ENST00000446852 RPL24P83731 157 aaKnown RBP12.07□□□□□ -0.48
SMC6-206ENST00000446852 NBEAL1Q6ZS30 2694 aa12.07□□□□□ -0.48
SMC6-206ENST00000446852 MIAQ16674 131 aa12.06□□□□□ -0.48
SMC6-206ENST00000446852 PRSS2P07478 247 aa12.06□□□□□ -0.48
SMC6-206ENST00000446852 IGHV3OR16-9A0A0B4J2B5 98 aa12.05□□□□□ -0.48
SMC6-206ENST00000446852 TIMM17BO60830 172 aa12.05□□□□□ -0.48
SMC6-206ENST00000446852 ZNF625Q96I27 306 aaPredicted RBP12.05□□□□□ -0.48
SMC6-206ENST00000446852 LINC00959A0A1B0GUT2 108 aa12.05□□□□□ -0.48
SMC6-206ENST00000446852 DAND5Q8N907 189 aa12.05□□□□□ -0.48
SMC6-206ENST00000446852 NPC2P61916 151 aa12.04□□□□□ -0.48
SMC6-206ENST00000446852 PRO1854Q9UHT4 67 aa12.04□□□□□ -0.48
SMC6-206ENST00000446852 SFTA2Q6UW10 78 aa12.04□□□□□ -0.48
SMC6-206ENST00000446852 Q8N3U1 123 aa12.04□□□□□ -0.48
SMC6-206ENST00000446852 CLPSL2Q6UWE3 100 aa12.03□□□□□ -0.48
SMC6-206ENST00000446852 A0A0B4J2C4 111 aa12.02□□□□□ -0.48
SMC6-206ENST00000446852 TEX48A0A1B0GUV7 120 aa12.02□□□□□ -0.49
SMC6-206ENST00000446852 MRPL23Q16540 153 aaKnown RBP12.02□□□□□ -0.49
SMC6-206ENST00000446852 A0A087WZ39 114 aa12.01□□□□□ -0.49
SMC6-206ENST00000446852 ICOSQ9Y6W8 199 aa12.01□□□□□ -0.49
SMC6-206ENST00000446852 TRAV16A0A0A6YYK6 109 aaPredicted RBP12□□□□□ -0.49
SMC6-206ENST00000446852 H3BMG7 143 aa12□□□□□ -0.49
SMC6-206ENST00000446852 IGHV3-33P01772 117 aa12□□□□□ -0.49
SMC6-206ENST00000446852 C5orf38Q86SI9 138 aa12□□□□□ -0.49
SMC6-206ENST00000446852 COX7B2Q8TF08 81 aa12□□□□□ -0.49
SMC6-206ENST00000446852 A0A0U1RRA0 63 aa12□□□□□ -0.49
SMC6-206ENST00000446852 LOC107984156A0A0G2JMH3 177 aa11.99□□□□□ -0.49
SMC6-206ENST00000446852 XCL1P47992 114 aa11.99□□□□□ -0.49
SMC6-206ENST00000446852 CIRBPQ14011 172 aaKnown RBP11.99□□□□□ -0.49
SMC6-206ENST00000446852 ARL17AQ8IVW1 177 aa11.99□□□□□ -0.49
SMC6-206ENST00000446852 LINC00269Q8N2A0 174 aa11.99□□□□□ -0.49
SMC6-206ENST00000446852 TOMM7Q9P0U1 55 aa11.99□□□□□ -0.49
SMC6-206ENST00000446852 IFITM1P13164 125 aa11.98□□□□□ -0.49
SMC6-206ENST00000446852 HERV-K104P63124 156 aa11.98□□□□□ -0.49
SMC6-206ENST00000446852 SS18Q15532 418 aa11.98□□□□□ -0.49
SMC6-206ENST00000446852 C11orf68Q9H3H3 251 aaKnown RBP11.97□□□□□ -0.49
SMC6-206ENST00000446852 H7C2G1 150 aa11.97□□□□□ -0.49
SMC6-206ENST00000446852 MEIG1Q5JSS6 88 aa11.97□□□□□ -0.49
SMC6-206ENST00000446852 LELP1Q5T871 98 aa11.97□□□□□ -0.49
SMC6-206ENST00000446852 Q6ZTC4 211 aa11.97□□□□□ -0.49
SMC6-206ENST00000446852 LINC00308Q8TCZ7 52 aa11.97□□□□□ -0.49
SMC6-206ENST00000446852 ANGP03950 147 aaKnown RBP11.96□□□□□ -0.49
SMC6-206ENST00000446852 SH2D6Q7Z4S9 175 aa11.96□□□□□ -0.49
SMC6-206ENST00000446852 ERG28Q9UKR5 140 aa11.96□□□□□ -0.5
SMC6-206ENST00000446852 SOSTDC1Q6X4U4 206 aa11.95□□□□□ -0.5
SMC6-206ENST00000446852 PRB2P02812 416 aaPredicted RBP11.95□□□□□ -0.5
SMC6-206ENST00000446852 A0A0J9YWU9 116 aa11.94□□□□□ -0.5
SMC6-206ENST00000446852 REG3AQ06141 175 aa11.94□□□□□ -0.5
SMC6-206ENST00000446852 OCIAD2Q56VL3 154 aa11.94□□□□□ -0.5
SMC6-206ENST00000446852 MTURNQ8N3F0 131 aa11.94□□□□□ -0.5
SMC6-206ENST00000446852 PSMB2P49721 201 aa11.93□□□□□ -0.5
SMC6-206ENST00000446852 LYPD5Q6UWN5 251 aa11.93□□□□□ -0.5
SMC6-206ENST00000446852 PRO0461Q9UI25 63 aa11.93□□□□□ -0.5
SMC6-206ENST00000446852 IGLV10-54A0A075B6I4 117 aa11.93□□□□□ -0.5
SMC6-206ENST00000446852 TCL1BO95988 128 aa11.93□□□□□ -0.5
SMC6-206ENST00000446852 WFDC2Q14508 124 aa11.92□□□□□ -0.5
SMC6-206ENST00000446852 KPRPQ5T749 579 aaPredicted RBP11.92□□□□□ -0.5
SMC6-206ENST00000446852 LYRM7Q5U5X0 104 aa11.92□□□□□ -0.5
SMC6-206ENST00000446852 CHCHD10Q8WYQ3 142 aaPredicted RBP11.92□□□□□ -0.5
SMC6-206ENST00000446852 MGAM2Q2M2H8 2515 aa11.91□□□□□ -0.5
SMC6-206ENST00000446852 F8W1H4 67 aa11.91□□□□□ -0.5
SMC6-206ENST00000446852 Q1RN00 199 aa11.91□□□□□ -0.5
SMC6-206ENST00000446852 H3BNG1 76 aa11.91□□□□□ -0.5
SMC6-206ENST00000446852 CD164L2Q6UWJ8 174 aa11.91□□□□□ -0.5
SMC6-206ENST00000446852 NANOS2P60321 138 aaKnown RBP11.9□□□□□ -0.5
SMC6-206ENST00000446852 SCGB1C2P0DMR2 95 aa11.89□□□□□ -0.51
SMC6-206ENST00000446852 TRBV20-1A0A075B6N2 111 aa11.88□□□□□ -0.51
SMC6-206ENST00000446852 TRIAP1O43715 76 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms