RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 MUC21A0A0G2JKD1 596 aa4.62□□□□□ -1.67
HDAC9-216ENST00000446646 MUC21A0A140T8X8 626 aa4.62□□□□□ -1.67
HDAC9-216ENST00000446646 A0A1B0GUT8 65 aa4.62□□□□□ -1.67
HDAC9-216ENST00000446646 GAGE12JA6NER3 117 aa4.62□□□□□ -1.67
HDAC9-216ENST00000446646 HIGD1CA8MV81 97 aa4.62□□□□□ -1.67
HDAC9-216ENST00000446646 CCL25O15444 150 aa4.62□□□□□ -1.67
HDAC9-216ENST00000446646 NTF3P20783 257 aa4.62□□□□□ -1.67
HDAC9-216ENST00000446646 RPL23P62829 140 aaKnown RBP4.62□□□□□ -1.67
HDAC9-216ENST00000446646 GAGE4Q13068 117 aa4.62□□□□□ -1.67
HDAC9-216ENST00000446646 RIGQ13278 110 aa4.62□□□□□ -1.67
HDAC9-216ENST00000446646 UFSP1Q6NVU6 142 aa4.62□□□□□ -1.67
HDAC9-216ENST00000446646 MRPL55Q7Z7F7 128 aaKnown RBP4.62□□□□□ -1.67
HDAC9-216ENST00000446646 NFE4Q86UQ8 179 aa4.62□□□□□ -1.67
HDAC9-216ENST00000446646 CIRBP-AS1Q8TBR5 109 aa4.62□□□□□ -1.67
HDAC9-216ENST00000446646 NTN5Q8WTR8 489 aaPredicted RBP4.62□□□□□ -1.67
HDAC9-216ENST00000446646 CNFNQ9BYD5 112 aa4.62□□□□□ -1.67
HDAC9-216ENST00000446646 GTSF1LQ9H1H1 148 aa4.62□□□□□ -1.67
HDAC9-216ENST00000446646 NAT8BQ9UHF3 227 aa4.62□□□□□ -1.67
HDAC9-216ENST00000446646 LAMTOR2Q9Y2Q5 125 aa4.62□□□□□ -1.67
HDAC9-216ENST00000446646 TRBV7-3A0A075B6L6 115 aa4.61□□□□□ -1.67
HDAC9-216ENST00000446646 MT-ND4LP03901 98 aa4.61□□□□□ -1.67
HDAC9-216ENST00000446646 LAGE3Q14657 143 aa4.61□□□□□ -1.67
HDAC9-216ENST00000446646 LYPD5Q6UWN5 251 aa4.61□□□□□ -1.67
HDAC9-216ENST00000446646 WFDC10BQ8IUB3 73 aa4.61□□□□□ -1.67
HDAC9-216ENST00000446646 PGLYRP4Q96LB8 373 aa4.61□□□□□ -1.67
HDAC9-216ENST00000446646 SAMD10Q9BYL1 202 aa4.61□□□□□ -1.67
HDAC9-216ENST00000446646 JPT2Q9H910 190 aa4.61□□□□□ -1.67
HDAC9-216ENST00000446646 IGHV3-38A0A0C4DH36 116 aa4.6□□□□□ -1.67
HDAC9-216ENST00000446646 LOC100131303A0A0U1RQF7 123 aa4.6□□□□□ -1.67
HDAC9-216ENST00000446646 FAM240AA0A1B0GVK7 77 aa4.6□□□□□ -1.67
HDAC9-216ENST00000446646 SMKR1H3BMG3 65 aa4.6□□□□□ -1.67
HDAC9-216ENST00000446646 J3QR89 54 aa4.6□□□□□ -1.67
HDAC9-216ENST00000446646 PHOX2AO14813 284 aa4.6□□□□□ -1.67
HDAC9-216ENST00000446646 FOXA3P55318 350 aaPredicted RBP4.6□□□□□ -1.67
HDAC9-216ENST00000446646 BATFQ16520 125 aa4.6□□□□□ -1.67
HDAC9-216ENST00000446646 GTF2H5Q6ZYL4 71 aa4.6□□□□□ -1.67
HDAC9-216ENST00000446646 DAZ4Q86SG3 579 aaKnown RBP4.6□□□□□ -1.67
HDAC9-216ENST00000446646 CHAC1Q9BUX1 264 aa4.6□□□□□ -1.67
HDAC9-216ENST00000446646 DAZ3Q9NR90 486 aaKnown RBP4.6□□□□□ -1.67
HDAC9-216ENST00000446646 V9GYV3 84 aa4.6□□□□□ -1.67
HDAC9-216ENST00000446646 C9JQL5 133 aa4.59□□□□□ -1.67
HDAC9-216ENST00000446646 LECT2O14960 151 aa4.59□□□□□ -1.67
HDAC9-216ENST00000446646 PPP1R17O96001 155 aa4.59□□□□□ -1.67
HDAC9-216ENST00000446646 RPL37AP61513 92 aaKnown RBP4.59□□□□□ -1.67
HDAC9-216ENST00000446646 FABP9Q0Z7S8 132 aa4.59□□□□□ -1.67
HDAC9-216ENST00000446646 ELOBQ15370 118 aa4.59□□□□□ -1.67
HDAC9-216ENST00000446646 MUC17Q685J3 4493 aa4.59□□□□□ -1.67
HDAC9-216ENST00000446646 RASL11AQ6T310 242 aa4.59□□□□□ -1.67
HDAC9-216ENST00000446646 NEXN-AS1Q8NBZ9 246 aa4.59□□□□□ -1.67
HDAC9-216ENST00000446646 GTSF1Q8WW33 167 aa4.59□□□□□ -1.67
HDAC9-216ENST00000446646 CHCHD7Q9BUK0 85 aa4.59□□□□□ -1.67
HDAC9-216ENST00000446646 TRBV25-1A0A075B6N4 114 aa4.58□□□□□ -1.68
HDAC9-216ENST00000446646 NDUFC2O95298 119 aa4.58□□□□□ -1.68
HDAC9-216ENST00000446646 LINC00694P0DN24 101 aa4.58□□□□□ -1.68
HDAC9-216ENST00000446646 UBE2D3P61077 147 aa4.58□□□□□ -1.68
HDAC9-216ENST00000446646 UBE2D2P62837 147 aa4.58□□□□□ -1.68
HDAC9-216ENST00000446646 HBBP68871 147 aa4.58□□□□□ -1.68
HDAC9-216ENST00000446646 PYY3Q5JQD4 70 aa4.58□□□□□ -1.68
HDAC9-216ENST00000446646 LINC01556Q5JQF7 62 aa4.58□□□□□ -1.68
HDAC9-216ENST00000446646 ATP5L2Q7Z4Y8 100 aa4.58□□□□□ -1.68
HDAC9-216ENST00000446646 NUP35Q8NFH5 326 aa4.58□□□□□ -1.68
HDAC9-216ENST00000446646 ANAPC13Q9BS18 74 aa4.58□□□□□ -1.68
HDAC9-216ENST00000446646 SEC11CQ9BY50 192 aa4.58□□□□□ -1.68
HDAC9-216ENST00000446646 TMEM191AQ9H0A3 160 aa4.58□□□□□ -1.68
HDAC9-216ENST00000446646 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.57□□□□□ -1.68
HDAC9-216ENST00000446646 IGHV1-24A0A0C4DH33 117 aa4.57□□□□□ -1.68
HDAC9-216ENST00000446646 SMIM27A0A1W2PRY6 76 aa4.57□□□□□ -1.68
HDAC9-216ENST00000446646 M0QY20 66 aa4.57□□□□□ -1.68
HDAC9-216ENST00000446646 UBE2L6O14933 153 aa4.57□□□□□ -1.68
HDAC9-216ENST00000446646 Q75L30 129 aa4.57□□□□□ -1.68
HDAC9-216ENST00000446646 TMEM18Q96B42 140 aa4.57□□□□□ -1.68
HDAC9-216ENST00000446646 RMI2Q96E14 147 aa4.57□□□□□ -1.68
HDAC9-216ENST00000446646 KIR2DL4Q99706 377 aa4.57□□□□□ -1.68
HDAC9-216ENST00000446646 CHCHD5Q9BSY4 110 aa4.57□□□□□ -1.68
HDAC9-216ENST00000446646 KRTAP9-8Q9BYQ0 159 aa4.57□□□□□ -1.68
HDAC9-216ENST00000446646 CRCT1Q9UGL9 99 aa4.57□□□□□ -1.68
HDAC9-216ENST00000446646 PKIGQ9Y2B9 76 aa4.57□□□□□ -1.68
HDAC9-216ENST00000446646 KIF25-AS1Q9Y6Z4 181 aa4.57□□□□□ -1.68
HDAC9-216ENST00000446646 TRBV6-8A0A0A6YYG3 113 aa4.56□□□□□ -1.68
HDAC9-216ENST00000446646 TRAV8-3A0A0A6YYJ7 113 aa4.56□□□□□ -1.68
HDAC9-216ENST00000446646 TMEM262E9PQX1 116 aa4.56□□□□□ -1.68
HDAC9-216ENST00000446646 PSCAO43653 123 aa4.56□□□□□ -1.68
HDAC9-216ENST00000446646 CRPP02741 224 aa4.56□□□□□ -1.68
HDAC9-216ENST00000446646 PLEKHB2Q96CS7 222 aa4.56□□□□□ -1.68
HDAC9-216ENST00000446646 Q9HAA7 133 aa4.56□□□□□ -1.68
HDAC9-216ENST00000446646 COX11Q9Y6N1 276 aa4.56□□□□□ -1.68
HDAC9-216ENST00000446646 TRAV9-1A0A075B6T8 112 aa4.55□□□□□ -1.68
HDAC9-216ENST00000446646 A6NDN8 102 aa4.55□□□□□ -1.68
HDAC9-216ENST00000446646 C9JAW5 83 aa4.55□□□□□ -1.68
HDAC9-216ENST00000446646 NCR2O95944 276 aa4.55□□□□□ -1.68
HDAC9-216ENST00000446646 IGHV3-30P01768 117 aa4.55□□□□□ -1.68
HDAC9-216ENST00000446646 IGHV3-33P01772 117 aa4.55□□□□□ -1.68
HDAC9-216ENST00000446646 APCSP02743 223 aa4.55□□□□□ -1.68
HDAC9-216ENST00000446646 IGHV3-30-3P0DP02 117 aa4.55□□□□□ -1.68
HDAC9-216ENST00000446646 IGHV3-30-5P0DP03 117 aa4.55□□□□□ -1.68
HDAC9-216ENST00000446646 Q0VG73 95 aa4.55□□□□□ -1.68
HDAC9-216ENST00000446646 PMAIP1Q13794 54 aa4.55□□□□□ -1.68
HDAC9-216ENST00000446646 MRPL54Q6P161 138 aaKnown RBP4.55□□□□□ -1.68
HDAC9-216ENST00000446646 SVBPQ8N300 66 aa4.55□□□□□ -1.68
HDAC9-216ENST00000446646 IMMP2LQ96T52 175 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms