RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 CHD8Q9HCK8 2581 aa9.93□□□□□ -0.82
VPS52-212ENST00000445902 TRGV1A0A0A0MS02 117 aa9.93□□□□□ -0.82
VPS52-212ENST00000445902 C4orf26Q17RF5 130 aa9.93□□□□□ -0.82
VPS52-212ENST00000445902 XCL2Q9UBD3 114 aa9.93□□□□□ -0.82
VPS52-212ENST00000445902 JMJD1CQ15652 2540 aa9.92□□□□□ -0.82
VPS52-212ENST00000445902 UPK3BQ9BT76 320 aa9.92□□□□□ -0.82
VPS52-212ENST00000445902 PFN2P35080 140 aa9.92□□□□□ -0.82
VPS52-212ENST00000445902 Q6JHZ5 121 aa9.92□□□□□ -0.82
VPS52-212ENST00000445902 UBE2E2Q96LR5 201 aa9.92□□□□□ -0.82
VPS52-212ENST00000445902 RPS28P62857 69 aaKnown RBP9.91□□□□□ -0.82
VPS52-212ENST00000445902 CDC42SE2Q9NRR3 84 aa9.91□□□□□ -0.82
VPS52-212ENST00000445902 TMEM89A2RUT3 159 aa9.91□□□□□ -0.82
VPS52-212ENST00000445902 TMEM258P61165 79 aa9.91□□□□□ -0.82
VPS52-212ENST00000445902 RPL36AP83881 106 aaKnown RBP9.91□□□□□ -0.82
VPS52-212ENST00000445902 RPL36ALQ969Q0 106 aaKnown RBP9.91□□□□□ -0.82
VPS52-212ENST00000445902 MXRA5Q9NR99 2828 aa9.91□□□□□ -0.82
VPS52-212ENST00000445902 IGHV4-30-2A0A087WSY4 118 aa9.9□□□□□ -0.82
VPS52-212ENST00000445902 C11orf68Q9H3H3 251 aaKnown RBP9.9□□□□□ -0.82
VPS52-212ENST00000445902 CHD6Q8TD26 2715 aa9.9□□□□□ -0.82
VPS52-212ENST00000445902 DEFB112Q30KQ8 113 aa9.9□□□□□ -0.82
VPS52-212ENST00000445902 HRCT1Q6UXD1 115 aa9.9□□□□□ -0.83
VPS52-212ENST00000445902 ITPR1Q14643 2758 aa9.89□□□□□ -0.83
VPS52-212ENST00000445902 CCL18P55774 89 aa9.89□□□□□ -0.83
VPS52-212ENST00000445902 COX7B2Q8TF08 81 aa9.89□□□□□ -0.83
VPS52-212ENST00000445902 PAX4O43316 350 aa9.89□□□□□ -0.83
VPS52-212ENST00000445902 UTP20O75691 2785 aaKnown RBP9.89□□□□□ -0.83
VPS52-212ENST00000445902 TLN2Q9Y4G6 2542 aa9.88□□□□□ -0.83
VPS52-212ENST00000445902 TRAV23DV6A0A075B6W5 121 aa9.88□□□□□ -0.83
VPS52-212ENST00000445902 UBE2L6O14933 153 aa9.88□□□□□ -0.83
VPS52-212ENST00000445902 PF4P02776 101 aa9.88□□□□□ -0.83
VPS52-212ENST00000445902 MSMBP08118 114 aa9.88□□□□□ -0.83
VPS52-212ENST00000445902 FHL2Q14192 279 aa9.88□□□□□ -0.83
VPS52-212ENST00000445902 Q6ZTI0 123 aa9.87□□□□□ -0.83
VPS52-212ENST00000445902 C10orf105Q8TEF2 133 aa9.87□□□□□ -0.83
VPS52-212ENST00000445902 KHDC1LQ5JSQ8 128 aa9.87□□□□□ -0.83
VPS52-212ENST00000445902 MAP6D1Q9H9H5 199 aa9.87□□□□□ -0.83
VPS52-212ENST00000445902 POLQO75417 2590 aa9.87□□□□□ -0.83
VPS52-212ENST00000445902 INSP01308 110 aa9.87□□□□□ -0.83
VPS52-212ENST00000445902 USP9XQ93008 2570 aaPredicted RBP9.86□□□□□ -0.83
VPS52-212ENST00000445902 OVOL2Q9BRP0 275 aa9.86□□□□□ -0.83
VPS52-212ENST00000445902 K7EQD1 137 aa9.86□□□□□ -0.83
VPS52-212ENST00000445902 FAM19A3Q7Z5A8 133 aa9.86□□□□□ -0.83
VPS52-212ENST00000445902 FBN2P35556 2912 aa9.85□□□□□ -0.83
VPS52-212ENST00000445902 LOC100131303A0A0U1RQF7 123 aa9.85□□□□□ -0.83
VPS52-212ENST00000445902 FAM19A1Q7Z5A9 133 aa9.85□□□□□ -0.83
VPS52-212ENST00000445902 OBSCN-AS1Q96MR7 158 aa9.85□□□□□ -0.83
VPS52-212ENST00000445902 SPTBN4Q9H254 2564 aa9.85□□□□□ -0.83
VPS52-212ENST00000445902 CENPEQ02224 2701 aa9.85□□□□□ -0.83
VPS52-212ENST00000445902 GHRHP01286 108 aa9.85□□□□□ -0.83
VPS52-212ENST00000445902 RNASE1P07998 156 aaKnown RBP9.85□□□□□ -0.83
VPS52-212ENST00000445902 H0YGX0 51 aa9.84□□□□□ -0.83
VPS52-212ENST00000445902 SETD2Q9BYW2 2564 aaPredicted RBP9.84□□□□□ -0.83
VPS52-212ENST00000445902 SS18Q15532 418 aa9.84□□□□□ -0.83
VPS52-212ENST00000445902 CCL19Q99731 98 aa9.84□□□□□ -0.83
VPS52-212ENST00000445902 AKAP9Q99996 3911 aa9.84□□□□□ -0.83
VPS52-212ENST00000445902 Q5XG85 94 aa9.83□□□□□ -0.84
VPS52-212ENST00000445902 MAPK1IP1LQ8NDC0 245 aa9.83□□□□□ -0.84
VPS52-212ENST00000445902 TMEM243Q9BU79 118 aa9.83□□□□□ -0.84
VPS52-212ENST00000445902 ENHOQ6UWT2 76 aa9.83□□□□□ -0.84
VPS52-212ENST00000445902 ORMDL1Q9P0S3 153 aa9.83□□□□□ -0.84
VPS52-212ENST00000445902 NIPBLQ6KC79 2804 aaeCLIP9.83□□□□□ -0.84
VPS52-212ENST00000445902 A8MTW9 85 aa9.82□□□□□ -0.84
VPS52-212ENST00000445902 DYNLRB2Q8TF09 96 aa9.82□□□□□ -0.84
VPS52-212ENST00000445902 PRR3P79522 188 aaKnown RBP9.81□□□□□ -0.84
VPS52-212ENST00000445902 C20orf197Q8N268 126 aa9.81□□□□□ -0.84
VPS52-212ENST00000445902 IGLV4-60A0A075B6I1 120 aa9.81□□□□□ -0.84
VPS52-212ENST00000445902 C1orf158Q8N1D5 194 aa9.81□□□□□ -0.84
VPS52-212ENST00000445902 TRAV25A0A0B4J276 109 aa9.81□□□□□ -0.84
VPS52-212ENST00000445902 CCKP06307 115 aa9.81□□□□□ -0.84
VPS52-212ENST00000445902 PTPN13Q12923 2485 aa9.8□□□□□ -0.84
VPS52-212ENST00000445902 FLNCQ14315 2725 aa9.8□□□□□ -0.84
VPS52-212ENST00000445902 NOP10Q9NPE3 64 aaKnown RBP9.8□□□□□ -0.84
VPS52-212ENST00000445902 ANKRD17O75179 2603 aaKnown RBP9.8□□□□□ -0.84
VPS52-212ENST00000445902 UCNP55089 124 aa9.79□□□□□ -0.84
VPS52-212ENST00000445902 EPG5Q9HCE0 2579 aa9.78□□□□□ -0.84
VPS52-212ENST00000445902 SETXQ7Z333 2677 aaKnown RBP9.78□□□□□ -0.84
VPS52-212ENST00000445902 TRBV10-1A0A0K0K1A3 114 aa9.78□□□□□ -0.84
VPS52-212ENST00000445902 B4DSR2 109 aa9.77□□□□□ -0.85
VPS52-212ENST00000445902 ZNF702PQ9H963 129 aa9.77□□□□□ -0.85
VPS52-212ENST00000445902 FN1P02751 2386 aaKnown RBP9.77□□□□□ -0.85
VPS52-212ENST00000445902 TRBV6-4A0A1B0GX49 114 aa9.77□□□□□ -0.85
VPS52-212ENST00000445902 PLA2G2AP14555 144 aa9.77□□□□□ -0.85
VPS52-212ENST00000445902 STHQ8IWL8 128 aa9.77□□□□□ -0.85
VPS52-212ENST00000445902 IBA57-AS1B1ANH7 110 aa9.76□□□□□ -0.85
VPS52-212ENST00000445902 WIPF1O43516 503 aa9.76□□□□□ -0.85
VPS52-212ENST00000445902 IGHV3OR16-9A0A0B4J2B5 98 aa9.76□□□□□ -0.85
VPS52-212ENST00000445902 NBL1P41271 181 aa9.76□□□□□ -0.85
VPS52-212ENST00000445902 ODF3L2Q3SX64 289 aa9.76□□□□□ -0.85
VPS52-212ENST00000445902 NBPF19A0A087WUL8 3843 aa9.76□□□□□ -0.85
VPS52-212ENST00000445902 TRGV2A0A075B6R0 118 aa9.75□□□□□ -0.85
VPS52-212ENST00000445902 C6orf226Q5I0X4 101 aa9.75□□□□□ -0.85
VPS52-212ENST00000445902 LRRK2Q5S007 2527 aa9.75□□□□□ -0.85
VPS52-212ENST00000445902 TEX15Q9BXT5 2789 aa9.75□□□□□ -0.85
VPS52-212ENST00000445902 GNLYP22749 145 aa9.75□□□□□ -0.85
VPS52-212ENST00000445902 NF1P21359 2839 aa9.74□□□□□ -0.85
VPS52-212ENST00000445902 DEFB114Q30KQ6 69 aa9.74□□□□□ -0.85
VPS52-212ENST00000445902 CLPSL2Q6UWE3 100 aa9.74□□□□□ -0.85
VPS52-212ENST00000445902 IL17DQ8TAD2 202 aa9.74□□□□□ -0.85
VPS52-212ENST00000445902 XCL1P47992 114 aa9.73□□□□□ -0.85
VPS52-212ENST00000445902 SONP18583 2426 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 185.8 ms