RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 PRSS2P07478 247 aa11.94□□□□□ -0.5
LAPTM4B-201ENST00000445593 TAL2Q16559 108 aa11.94□□□□□ -0.5
LAPTM4B-201ENST00000445593 C5orf47Q569G3 176 aa11.94□□□□□ -0.5
LAPTM4B-201ENST00000445593 SPANXA1Q9NS26 97 aa11.94□□□□□ -0.5
LAPTM4B-201ENST00000445593 COX6A2Q02221 97 aa11.94□□□□□ -0.5
LAPTM4B-201ENST00000445593 C10orf126Q8N4M7 172 aa11.94□□□□□ -0.5
LAPTM4B-201ENST00000445593 IFITM1P13164 125 aa11.93□□□□□ -0.5
LAPTM4B-201ENST00000445593 DAZ2Q13117 558 aaKnown RBP11.93□□□□□ -0.5
LAPTM4B-201ENST00000445593 PKD1L1Q8TDX9 2849 aa11.93□□□□□ -0.5
LAPTM4B-201ENST00000445593 SMCPP49901 116 aaPredicted RBP11.93□□□□□ -0.5
LAPTM4B-201ENST00000445593 CHCHD5Q9BSY4 110 aa11.93□□□□□ -0.5
LAPTM4B-201ENST00000445593 DAND5Q8N907 189 aa11.93□□□□□ -0.5
LAPTM4B-201ENST00000445593 UBE2L6O14933 153 aa11.92□□□□□ -0.5
LAPTM4B-201ENST00000445593 MRPS36P82909 103 aaKnown RBP11.92□□□□□ -0.5
LAPTM4B-201ENST00000445593 UBE2D3P61077 147 aa11.92□□□□□ -0.5
LAPTM4B-201ENST00000445593 UBE2D2P62837 147 aa11.92□□□□□ -0.5
LAPTM4B-201ENST00000445593 CARD19Q96LW7 228 aa11.92□□□□□ -0.5
LAPTM4B-201ENST00000445593 PRO0461Q9UI25 63 aa11.91□□□□□ -0.5
LAPTM4B-201ENST00000445593 NDUFA12Q9UI09 145 aa11.9□□□□□ -0.5
LAPTM4B-201ENST00000445593 IGHV3-30P01768 117 aa11.9□□□□□ -0.5
LAPTM4B-201ENST00000445593 IGHV3-30-5P0DP03 117 aa11.9□□□□□ -0.5
LAPTM4B-201ENST00000445593 COL6A5A8TX70 2615 aa11.9□□□□□ -0.5
LAPTM4B-201ENST00000445593 UBE2D1P51668 147 aa11.89□□□□□ -0.51
LAPTM4B-201ENST00000445593 A0A0J9YXY3 114 aa11.89□□□□□ -0.51
LAPTM4B-201ENST00000445593 TRBV10-1A0A0K0K1A3 114 aa11.89□□□□□ -0.51
LAPTM4B-201ENST00000445593 DAZ4Q86SG3 579 aaKnown RBP11.89□□□□□ -0.51
LAPTM4B-201ENST00000445593 MUSTN1Q8IVN3 82 aa11.89□□□□□ -0.51
LAPTM4B-201ENST00000445593 DAZ3Q9NR90 486 aaKnown RBP11.89□□□□□ -0.51
LAPTM4B-201ENST00000445593 FHL2Q14192 279 aa11.88□□□□□ -0.51
LAPTM4B-201ENST00000445593 IGHV1-58A0A0C4DH39 117 aa11.88□□□□□ -0.51
LAPTM4B-201ENST00000445593 SMIM9A6NGZ8 99 aa11.88□□□□□ -0.51
LAPTM4B-201ENST00000445593 C9orf66Q5T8R8 295 aa11.88□□□□□ -0.51
LAPTM4B-201ENST00000445593 TINCRA0A1B0GVN0 87 aa11.87□□□□□ -0.51
LAPTM4B-201ENST00000445593 TMEM243Q9BU79 118 aa11.87□□□□□ -0.51
LAPTM4B-201ENST00000445593 VSIG2Q96IQ7 327 aa11.87□□□□□ -0.51
LAPTM4B-201ENST00000445593 FBN1P35555 2871 aaKnown RBP11.87□□□□□ -0.51
LAPTM4B-201ENST00000445593 CFC1BP0CG36 223 aa11.87□□□□□ -0.51
LAPTM4B-201ENST00000445593 CFC1P0CG37 223 aa11.87□□□□□ -0.51
LAPTM4B-201ENST00000445593 SCGB1C2P0DMR2 95 aa11.87□□□□□ -0.51
LAPTM4B-201ENST00000445593 ADAMTSL4-AS1Q5T5F5 129 aa11.87□□□□□ -0.51
LAPTM4B-201ENST00000445593 LINC00242Q5T6M2 205 aa11.87□□□□□ -0.51
LAPTM4B-201ENST00000445593 FAM222AQ5U5X8 452 aa11.86□□□□□ -0.51
LAPTM4B-201ENST00000445593 HTN3P15516 51 aa11.86□□□□□ -0.51
LAPTM4B-201ENST00000445593 CLPSL2Q6UWE3 100 aa11.86□□□□□ -0.51
LAPTM4B-201ENST00000445593 X6R8D5 127 aa11.86□□□□□ -0.51
LAPTM4B-201ENST00000445593 GYPEP15421 78 aa11.85□□□□□ -0.51
LAPTM4B-201ENST00000445593 FAM19A5Q7Z5A7 132 aaPredicted RBP11.85□□□□□ -0.51
LAPTM4B-201ENST00000445593 OVOL2Q9BRP0 275 aa11.85□□□□□ -0.51
LAPTM4B-201ENST00000445593 TMEM262E9PQX1 116 aa11.85□□□□□ -0.51
LAPTM4B-201ENST00000445593 ANKRD29Q8N6D5 301 aa11.85□□□□□ -0.51
LAPTM4B-201ENST00000445593 TMEM101Q96IK0 257 aa11.85□□□□□ -0.51
LAPTM4B-201ENST00000445593 PPDPFLQ8WWR9 84 aa11.84□□□□□ -0.51
LAPTM4B-201ENST00000445593 IGLV4-60A0A075B6I1 120 aa11.84□□□□□ -0.51
LAPTM4B-201ENST00000445593 TRBV6-4A0A1B0GX49 114 aa11.83□□□□□ -0.51
LAPTM4B-201ENST00000445593 Q1RN00 199 aa11.83□□□□□ -0.51
LAPTM4B-201ENST00000445593 CDC42SE2Q9NRR3 84 aa11.83□□□□□ -0.52
LAPTM4B-201ENST00000445593 TOMM7Q9P0U1 55 aa11.83□□□□□ -0.52
LAPTM4B-201ENST00000445593 EIF4EBP3O60516 100 aaPredicted RBP11.83□□□□□ -0.52
LAPTM4B-201ENST00000445593 OXLD1Q5BKU9 147 aa11.83□□□□□ -0.52
LAPTM4B-201ENST00000445593 Q9H8V8 135 aa11.82□□□□□ -0.52
LAPTM4B-201ENST00000445593 C15orf53Q8NAA6 179 aa11.81□□□□□ -0.52
LAPTM4B-201ENST00000445593 SBSPONQ8IVN8 264 aa11.81□□□□□ -0.52
LAPTM4B-201ENST00000445593 BAHCC1Q9P281 2608 aa11.8□□□□□ -0.52
LAPTM4B-201ENST00000445593 C11orf68Q9H3H3 251 aaKnown RBP11.8□□□□□ -0.52
LAPTM4B-201ENST00000445593 TRBV6-8A0A0A6YYG3 113 aa11.79□□□□□ -0.52
LAPTM4B-201ENST00000445593 IGHV4-28A0A0C4DH34 117 aa11.79□□□□□ -0.52
LAPTM4B-201ENST00000445593 F5H768 121 aa11.79□□□□□ -0.52
LAPTM4B-201ENST00000445593 HERVK_113P63121 156 aa11.79□□□□□ -0.52
LAPTM4B-201ENST00000445593 TEN1Q86WV5 123 aa11.79□□□□□ -0.52
LAPTM4B-201ENST00000445593 PRO1854Q9UHT4 67 aa11.79□□□□□ -0.52
LAPTM4B-201ENST00000445593 CELA1Q9UNI1 258 aa11.79□□□□□ -0.52
LAPTM4B-201ENST00000445593 LITAFQ99732 161 aa11.78□□□□□ -0.52
LAPTM4B-201ENST00000445593 C9orf153Q5TBE3 101 aa11.78□□□□□ -0.52
LAPTM4B-201ENST00000445593 SMIM1B2RUZ4 78 aa11.77□□□□□ -0.52
LAPTM4B-201ENST00000445593 C9JAW5 83 aa11.77□□□□□ -0.52
LAPTM4B-201ENST00000445593 Q8N3U1 123 aa11.77□□□□□ -0.52
LAPTM4B-201ENST00000445593 ATP6V0E2Q8NHE4 81 aa11.77□□□□□ -0.52
LAPTM4B-201ENST00000445593 C5orf38Q86SI9 138 aa11.77□□□□□ -0.53
LAPTM4B-201ENST00000445593 PRIMA1Q86XR5 153 aa11.77□□□□□ -0.53
LAPTM4B-201ENST00000445593 TENM3Q9P273 2699 aa11.77□□□□□ -0.53
LAPTM4B-201ENST00000445593 IGHV4-30-4P0DP06 118 aa11.77□□□□□ -0.53
LAPTM4B-201ENST00000445593 TIRAPP58753 221 aa11.77□□□□□ -0.53
LAPTM4B-201ENST00000445593 HRCT1Q6UXD1 115 aa11.77□□□□□ -0.53
LAPTM4B-201ENST00000445593 PAX4O43316 350 aa11.76□□□□□ -0.53
LAPTM4B-201ENST00000445593 DAD1P61803 113 aa11.75□□□□□ -0.53
LAPTM4B-201ENST00000445593 NTN5Q8WTR8 489 aaPredicted RBP11.75□□□□□ -0.53
LAPTM4B-201ENST00000445593 TCL1BO95988 128 aa11.75□□□□□ -0.53
LAPTM4B-201ENST00000445593 RETNQ9HD89 108 aa11.75□□□□□ -0.53
LAPTM4B-201ENST00000445593 APOC4P55056 127 aa11.74□□□□□ -0.53
LAPTM4B-201ENST00000445593 KIR2DL5BQ8NHK3 375 aa11.74□□□□□ -0.53
LAPTM4B-201ENST00000445593 XCL1P47992 114 aa11.74□□□□□ -0.53
LAPTM4B-201ENST00000445593 PKIGQ9Y2B9 76 aa11.73□□□□□ -0.53
LAPTM4B-201ENST00000445593 IGLV5-45A0A087WSX0 123 aa11.73□□□□□ -0.53
LAPTM4B-201ENST00000445593 PRO0255Q9UI72 69 aa11.73□□□□□ -0.53
LAPTM4B-201ENST00000445593 C4orf26Q17RF5 130 aa11.73□□□□□ -0.53
LAPTM4B-201ENST00000445593 TEX49A0A1B0GTD5 131 aa11.72□□□□□ -0.53
LAPTM4B-201ENST00000445593 IGHV3-33P01772 117 aa11.72□□□□□ -0.53
LAPTM4B-201ENST00000445593 MIAQ16674 131 aa11.72□□□□□ -0.53
LAPTM4B-201ENST00000445593 IGLV10-54A0A075B6I4 117 aa11.72□□□□□ -0.53
LAPTM4B-201ENST00000445593 KRTAP24-1Q3LI83 254 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms