RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 HMGN4O00479 90 aa2.36□□□□□ -2.03
UBR3-206ENST00000444475 CEBPZOSA8MTT3 80 aa2.35□□□□□ -2.03
UBR3-206ENST00000444475 PLGLAQ15195 96 aa2.35□□□□□ -2.03
UBR3-206ENST00000444475 C1orf137Q5JT78 98 aa2.35□□□□□ -2.03
UBR3-206ENST00000444475 ZGRF1Q86YA3 2104 aa2.35□□□□□ -2.03
UBR3-206ENST00000444475 FBN2P35556 2912 aa2.35□□□□□ -2.03
UBR3-206ENST00000444475 LOC285095A0A1B0GVY8 99 aa2.35□□□□□ -2.03
UBR3-206ENST00000444475 CISD3P0C7P0 127 aa2.35□□□□□ -2.03
UBR3-206ENST00000444475 LCE1DQ5T752 114 aa2.35□□□□□ -2.03
UBR3-206ENST00000444475 TMEM254Q8TBM7 123 aa2.35□□□□□ -2.03
UBR3-206ENST00000444475 USP34Q70CQ2 3546 aa2.35□□□□□ -2.03
UBR3-206ENST00000444475 MYO9AB2RTY4 2548 aa2.35□□□□□ -2.03
UBR3-206ENST00000444475 LAMA3Q16787 3333 aa2.35□□□□□ -2.03
UBR3-206ENST00000444475 TENM4Q6N022 2769 aa2.34□□□□□ -2.03
UBR3-206ENST00000444475 IGSF10Q6WRI0 2623 aa2.34□□□□□ -2.03
UBR3-206ENST00000444475 VCANP13611 3396 aa2.34□□□□□ -2.03
UBR3-206ENST00000444475 TRBV6-6A0A0A6YYG2 114 aa2.34□□□□□ -2.03
UBR3-206ENST00000444475 C10orf128Q5T292 105 aa2.34□□□□□ -2.03
UBR3-206ENST00000444475 DOPEY1Q5JWR5 2465 aa2.34□□□□□ -2.03
UBR3-206ENST00000444475 FREM3P0C091 2139 aa2.34□□□□□ -2.03
UBR3-206ENST00000444475 NUP214P35658 2090 aaPredicted RBP2.34□□□□□ -2.03
UBR3-206ENST00000444475 IGKV3-7A0A075B6H7 116 aa2.34□□□□□ -2.03
UBR3-206ENST00000444475 A0A0J9YY99 117 aa2.34□□□□□ -2.03
UBR3-206ENST00000444475 WISP3O95389 354 aaPredicted RBP2.34□□□□□ -2.03
UBR3-206ENST00000444475 BAGE3Q86Y29 109 aa2.34□□□□□ -2.03
UBR3-206ENST00000444475 BAGE2Q86Y30 109 aa2.34□□□□□ -2.03
UBR3-206ENST00000444475 PRO2289Q9P1D8 64 aa2.34□□□□□ -2.03
UBR3-206ENST00000444475 ARL2-SNX15V9GYD0 113 aa2.34□□□□□ -2.03
UBR3-206ENST00000444475 SDK2Q58EX2 2172 aa2.34□□□□□ -2.04
UBR3-206ENST00000444475 PTPN13Q12923 2485 aa2.34□□□□□ -2.04
UBR3-206ENST00000444475 BRWD1Q9NSI6 2320 aa2.34□□□□□ -2.04
UBR3-206ENST00000444475 CFAP54Q96N23 3096 aa2.34□□□□□ -2.04
UBR3-206ENST00000444475 TRBV10-1A0A0K0K1A3 114 aa2.34□□□□□ -2.04
UBR3-206ENST00000444475 IFI27P40305 119 aaPredicted RBP2.34□□□□□ -2.04
UBR3-206ENST00000444475 SFTA2Q6UW10 78 aa2.34□□□□□ -2.04
UBR3-206ENST00000444475 FAM103A1Q9BTL3 118 aaKnown RBP2.34□□□□□ -2.04
UBR3-206ENST00000444475 KIF25-AS1Q9Y6Z4 181 aa2.34□□□□□ -2.04
UBR3-206ENST00000444475 IGKV1-17P01599 117 aa2.33□□□□□ -2.04
UBR3-206ENST00000444475 ARMS2P0C7Q2 107 aa2.33□□□□□ -2.04
UBR3-206ENST00000444475 HIGD2BQ4VC39 106 aa2.33□□□□□ -2.04
UBR3-206ENST00000444475 NCBP2-AS2Q69YL0 99 aa2.33□□□□□ -2.04
UBR3-206ENST00000444475 C2CD3Q4AC94 2353 aa2.33□□□□□ -2.04
UBR3-206ENST00000444475 NINQ8N4C6 2090 aa2.33□□□□□ -2.04
UBR3-206ENST00000444475 LINC00612Q8N6U2 182 aa2.33□□□□□ -2.04
UBR3-206ENST00000444475 HEATR5BQ9P2D3 2071 aa2.32□□□□□ -2.04
UBR3-206ENST00000444475 SAA2P0DJI9 122 aaPredicted RBP2.32□□□□□ -2.04
UBR3-206ENST00000444475 MED12Q93074 2177 aa2.32□□□□□ -2.04
UBR3-206ENST00000444475 PSORS1C2Q9UIG4 136 aa2.32□□□□□ -2.04
UBR3-206ENST00000444475 A0A0J9YX75 114 aa2.32□□□□□ -2.04
UBR3-206ENST00000444475 A0A1W2PNU3 283 aaPredicted RBP2.32□□□□□ -2.04
UBR3-206ENST00000444475 Q86TA4 180 aa2.32□□□□□ -2.04
UBR3-206ENST00000444475 DEFB107AQ8IZN7 70 aa2.32□□□□□ -2.04
UBR3-206ENST00000444475 ZFYVE26Q68DK2 2539 aa2.32□□□□□ -2.04
UBR3-206ENST00000444475 TMSB15BA0A087X1C1 80 aa2.32□□□□□ -2.04
UBR3-206ENST00000444475 PRB1P04280 392 aa2.32□□□□□ -2.04
UBR3-206ENST00000444475 S100A3P33764 101 aa2.32□□□□□ -2.04
UBR3-206ENST00000444475 CYYR1Q96J86 154 aa2.32□□□□□ -2.04
UBR3-206ENST00000444475 Q9BRP9 147 aa2.32□□□□□ -2.04
UBR3-206ENST00000444475 COL4A2P08572 1712 aa2.32□□□□□ -2.04
UBR3-206ENST00000444475 MYO7BQ6PIF6 2116 aa2.31□□□□□ -2.04
UBR3-206ENST00000444475 NUPR2A6NF83 97 aa2.31□□□□□ -2.04
UBR3-206ENST00000444475 HIGD1CA8MV81 97 aa2.31□□□□□ -2.04
UBR3-206ENST00000444475 ATP5EP2Q5VTU8 51 aa2.31□□□□□ -2.04
UBR3-206ENST00000444475 R4GN34 69 aa2.31□□□□□ -2.04
UBR3-206ENST00000444475 ZNF815PA8K554 130 aa2.31□□□□□ -2.04
UBR3-206ENST00000444475 ELOF1P60002 83 aaKnown RBP2.31□□□□□ -2.04
UBR3-206ENST00000444475 KRTAP7-1Q8IUC3 87 aa2.31□□□□□ -2.04
UBR3-206ENST00000444475 LENEPQ9Y5L5 61 aa2.31□□□□□ -2.04
UBR3-206ENST00000444475 UBR5O95071 2799 aaPredicted RBP2.31□□□□□ -2.04
UBR3-206ENST00000444475 ITPR1Q14643 2758 aa2.31□□□□□ -2.04
UBR3-206ENST00000444475 TET1Q8NFU7 2136 aa2.31□□□□□ -2.04
UBR3-206ENST00000444475 PCDH15Q96QU1 1955 aa2.31□□□□□ -2.04
UBR3-206ENST00000444475 MRGPRG-AS1Q2M3A8 158 aa2.31□□□□□ -2.04
UBR3-206ENST00000444475 DMAC1Q96GE9 116 aa2.3□□□□□ -2.04
UBR3-206ENST00000444475 TTTY12Q9BZ98 90 aa2.3□□□□□ -2.04
UBR3-206ENST00000444475 CNOT1A5YKK6 2376 aaKnown RBP2.3□□□□□ -2.04
UBR3-206ENST00000444475 CFAP47Q6ZTR5 3102 aa2.3□□□□□ -2.04
UBR3-206ENST00000444475 ABCA2Q9BZC7 2435 aa2.3□□□□□ -2.04
UBR3-206ENST00000444475 IGHV3-30P01768 117 aa2.3□□□□□ -2.04
UBR3-206ENST00000444475 IGHV3-30-5P0DP03 117 aa2.3□□□□□ -2.04
UBR3-206ENST00000444475 SPINT3P49223 89 aa2.3□□□□□ -2.04
UBR3-206ENST00000444475 DEFB103AP81534 67 aa2.3□□□□□ -2.04
UBR3-206ENST00000444475 ERHP84090 104 aaKnown RBP2.3□□□□□ -2.04
UBR3-206ENST00000444475 KRTAP10-2P60368 255 aa2.29□□□□□ -2.04
UBR3-206ENST00000444475 AMELXQ99217 191 aa2.29□□□□□ -2.04
UBR3-206ENST00000444475 BRCA2P51587 3418 aa2.29□□□□□ -2.04
UBR3-206ENST00000444475 SSBP1Q04837 148 aaKnown RBP2.29□□□□□ -2.04
UBR3-206ENST00000444475 HEATR1Q9H583 2144 aaKnown RBP2.29□□□□□ -2.04
UBR3-206ENST00000444475 COL6A6A6NMZ7 2263 aa2.29□□□□□ -2.04
UBR3-206ENST00000444475 TEX15Q9BXT5 2789 aa2.28□□□□□ -2.04
UBR3-206ENST00000444475 C2orf82Q6UX34 121 aa2.28□□□□□ -2.04
UBR3-206ENST00000444475 TOMM5Q8N4H5 51 aa2.28□□□□□ -2.04
UBR3-206ENST00000444475 BAZ2BQ9UIF8 2168 aaKnown RBP2.28□□□□□ -2.04
UBR3-206ENST00000444475 A0A087WYN8 130 aa2.28□□□□□ -2.04
UBR3-206ENST00000444475 A0A0J9YWU9 116 aa2.28□□□□□ -2.04
UBR3-206ENST00000444475 ATXN8Q156A1 80 aa2.28□□□□□ -2.04
UBR3-206ENST00000444475 FAM74A4Q5TZK3 123 aa2.28□□□□□ -2.04
UBR3-206ENST00000444475 ZNF563Q8TA94 476 aa2.28□□□□□ -2.04
UBR3-206ENST00000444475 NMES1Q9C002 83 aa2.28□□□□□ -2.04
UBR3-206ENST00000444475 DNHD1Q96M86 4753 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms