RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 AMELXQ99217 191 aa7.04□□□□□ -1.28
HDAC6-211ENST00000443563 IGHV3-64A0A075B6Q5 118 aa7.03□□□□□ -1.28
HDAC6-211ENST00000443563 UBE2D1P51668 147 aa7.03□□□□□ -1.28
HDAC6-211ENST00000443563 PKIGQ9Y2B9 76 aa7.03□□□□□ -1.28
HDAC6-211ENST00000443563 IGHV3OR16-9A0A0B4J2B5 98 aa7.02□□□□□ -1.29
HDAC6-211ENST00000443563 Q6ZSA8 131 aa7.02□□□□□ -1.29
HDAC6-211ENST00000443563 C5orf38Q86SI9 138 aa7.02□□□□□ -1.29
HDAC6-211ENST00000443563 OR10D4PQ8NGN7 298 aa7.02□□□□□ -1.29
HDAC6-211ENST00000443563 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.01□□□□□ -1.29
HDAC6-211ENST00000443563 HBDP02042 147 aa7.01□□□□□ -1.29
HDAC6-211ENST00000443563 TRGC2P03986 189 aa7.01□□□□□ -1.29
HDAC6-211ENST00000443563 XGP55808 180 aa7.01□□□□□ -1.29
HDAC6-211ENST00000443563 LINC01620Q4KN68 170 aa7.01□□□□□ -1.29
HDAC6-211ENST00000443563 LINC00242Q5T6M2 205 aa7.01□□□□□ -1.29
HDAC6-211ENST00000443563 LINC00173Q6ZV60 143 aa7.01□□□□□ -1.29
HDAC6-211ENST00000443563 FAM19A3Q7Z5A8 133 aa7.01□□□□□ -1.29
HDAC6-211ENST00000443563 LINC01561Q8N1V8 128 aa7.01□□□□□ -1.29
HDAC6-211ENST00000443563 CHCHD1Q96BP2 118 aaKnown RBP7.01□□□□□ -1.29
HDAC6-211ENST00000443563 A0A087WZ39 114 aa7□□□□□ -1.29
HDAC6-211ENST00000443563 COLCA2A8K830 154 aa7□□□□□ -1.29
HDAC6-211ENST00000443563 F8WDY8 70 aa7□□□□□ -1.29
HDAC6-211ENST00000443563 HERVK_113P63121 156 aa7□□□□□ -1.29
HDAC6-211ENST00000443563 URB1-AS1Q96HZ7 61 aa7□□□□□ -1.29
HDAC6-211ENST00000443563 C2orf48Q96LS8 159 aa7□□□□□ -1.29
HDAC6-211ENST00000443563 SLPIP03973 132 aa6.99□□□□□ -1.29
HDAC6-211ENST00000443563 SPAG11BQ08648 103 aa6.99□□□□□ -1.29
HDAC6-211ENST00000443563 SYCNQ0VAF6 134 aa6.99□□□□□ -1.29
HDAC6-211ENST00000443563 PMVKQ15126 192 aa6.99□□□□□ -1.29
HDAC6-211ENST00000443563 ZC2HC1BQ5TFG8 222 aa6.99□□□□□ -1.29
HDAC6-211ENST00000443563 SDIM1Q6ZPB5 146 aa6.99□□□□□ -1.29
HDAC6-211ENST00000443563 BAGE3Q86Y29 109 aa6.99□□□□□ -1.29
HDAC6-211ENST00000443563 ORAOV1Q8WV07 137 aa6.99□□□□□ -1.29
HDAC6-211ENST00000443563 CARD19Q96LW7 228 aa6.99□□□□□ -1.29
HDAC6-211ENST00000443563 GEMIN7Q9H840 131 aaKnown RBP6.99□□□□□ -1.29
HDAC6-211ENST00000443563 FAM30AQ9NZY2 134 aa6.99□□□□□ -1.29
HDAC6-211ENST00000443563 IGLV4-69A0A075B6H9 119 aa6.98□□□□□ -1.29
HDAC6-211ENST00000443563 ATP5LO75964 103 aa6.98□□□□□ -1.29
HDAC6-211ENST00000443563 COX6A2Q02221 97 aa6.98□□□□□ -1.29
HDAC6-211ENST00000443563 Q8N1X5 172 aa6.98□□□□□ -1.29
HDAC6-211ENST00000443563 CAMK2N2Q96S95 79 aa6.98□□□□□ -1.29
HDAC6-211ENST00000443563 CHAC1Q9BUX1 264 aa6.98□□□□□ -1.29
HDAC6-211ENST00000443563 A0A096LNJ9 63 aa6.97□□□□□ -1.29
HDAC6-211ENST00000443563 TINCRA0A1B0GVN0 87 aa6.97□□□□□ -1.29
HDAC6-211ENST00000443563 HSBP1O75506 76 aa6.97□□□□□ -1.29
HDAC6-211ENST00000443563 PDZD11Q5EBL8 140 aa6.97□□□□□ -1.29
HDAC6-211ENST00000443563 LINC00526Q96FQ7 95 aa6.97□□□□□ -1.29
HDAC6-211ENST00000443563 CST9LQ9H4G1 147 aa6.97□□□□□ -1.29
HDAC6-211ENST00000443563 VPS13BQ7Z7G8 4022 aa6.97□□□□□ -1.29
HDAC6-211ENST00000443563 FAM229AH3BQW9 127 aa6.96□□□□□ -1.3
HDAC6-211ENST00000443563 PMCHL1Q16048 86 aa6.96□□□□□ -1.3
HDAC6-211ENST00000443563 RNF151Q2KHN1 245 aa6.96□□□□□ -1.3
HDAC6-211ENST00000443563 PACRGQ96M98 296 aaPredicted RBP6.96□□□□□ -1.3
HDAC6-211ENST00000443563 LINC00474Q9P2X8 69 aa6.96□□□□□ -1.3
HDAC6-211ENST00000443563 FAT1Q14517 4588 aa6.96□□□□□ -1.3
HDAC6-211ENST00000443563 A0A0J9YXV3 536 aa6.95□□□□□ -1.3
HDAC6-211ENST00000443563 NDUFA1O15239 70 aa6.95□□□□□ -1.3
HDAC6-211ENST00000443563 SCO1O75880 301 aa6.95□□□□□ -1.3
HDAC6-211ENST00000443563 PRSS2P07478 247 aa6.95□□□□□ -1.3
HDAC6-211ENST00000443563 S100A1P23297 94 aa6.95□□□□□ -1.3
HDAC6-211ENST00000443563 NDUFA6P56556 154 aa6.95□□□□□ -1.3
HDAC6-211ENST00000443563 SCXQ7RTU7 201 aa6.95□□□□□ -1.3
HDAC6-211ENST00000443563 LINC00469Q8N7U9 141 aa6.95□□□□□ -1.3
HDAC6-211ENST00000443563 DPH3Q96FX2 82 aa6.95□□□□□ -1.3
HDAC6-211ENST00000443563 LOC107984640A0A0U1RRK4 108 aa6.94□□□□□ -1.3
HDAC6-211ENST00000443563 EPM2AB3EWF7 344 aa6.94□□□□□ -1.3
HDAC6-211ENST00000443563 HAMPP81172 84 aa6.94□□□□□ -1.3
HDAC6-211ENST00000443563 CIRBPQ14011 172 aaKnown RBP6.94□□□□□ -1.3
HDAC6-211ENST00000443563 Q6ZRU5 148 aa6.94□□□□□ -1.3
HDAC6-211ENST00000443563 CIRBP-AS1Q8TBR5 109 aa6.94□□□□□ -1.3
HDAC6-211ENST00000443563 MRPL35Q9NZE8 188 aaKnown RBP6.94□□□□□ -1.3
HDAC6-211ENST00000443563 CDKN2A-AS1Q9UH64 79 aa6.94□□□□□ -1.3
HDAC6-211ENST00000443563 SRRM2Q9UQ35 2752 aaKnown RBP6.93□□□□□ -1.3
HDAC6-211ENST00000443563 IGLV5-45A0A087WSX0 123 aa6.93□□□□□ -1.3
HDAC6-211ENST00000443563 H3BRM9 83 aa6.93□□□□□ -1.3
HDAC6-211ENST00000443563 SMR3BP02814 79 aaPredicted RBP6.93□□□□□ -1.3
HDAC6-211ENST00000443563 C6orf226Q5I0X4 101 aa6.93□□□□□ -1.3
HDAC6-211ENST00000443563 Q8IZM0 81 aa6.93□□□□□ -1.3
HDAC6-211ENST00000443563 SPACA4Q8TDM5 124 aa6.93□□□□□ -1.3
HDAC6-211ENST00000443563 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.93□□□□□ -1.3
HDAC6-211ENST00000443563 IGLC3P0DOY3 106 aa6.92□□□□□ -1.3
HDAC6-211ENST00000443563 CKS1BP61024 79 aa6.92□□□□□ -1.3
HDAC6-211ENST00000443563 KIAA0087Q14695 138 aa6.92□□□□□ -1.3
HDAC6-211ENST00000443563 IFI27L1Q96BM0 104 aa6.92□□□□□ -1.3
HDAC6-211ENST00000443563 TOMM7Q9P0U1 55 aa6.92□□□□□ -1.3
HDAC6-211ENST00000443563 TRAV12-1A0A0B4J245 112 aa6.91□□□□□ -1.3
HDAC6-211ENST00000443563 IGKV2-24A0A0C4DH68 120 aa6.91□□□□□ -1.3
HDAC6-211ENST00000443563 TRBV30A0A0K0K1B3 111 aa6.91□□□□□ -1.3
HDAC6-211ENST00000443563 SERF1AO75920 110 aa6.91□□□□□ -1.3
HDAC6-211ENST00000443563 LEPROTL1O95214 131 aa6.91□□□□□ -1.3
HDAC6-211ENST00000443563 CXCL5P42830 114 aa6.91□□□□□ -1.3
HDAC6-211ENST00000443563 MAJINQ3KP22 176 aa6.91□□□□□ -1.3
HDAC6-211ENST00000443563 Q5VSD8 79 aa6.91□□□□□ -1.3
HDAC6-211ENST00000443563 FAM19A2Q8N3H0 131 aa6.91□□□□□ -1.3
HDAC6-211ENST00000443563 A0A096LNI7 61 aa6.9□□□□□ -1.3
HDAC6-211ENST00000443563 SMIM1B2RUZ4 78 aa6.9□□□□□ -1.3
HDAC6-211ENST00000443563 PANO1I0J062 215 aa6.9□□□□□ -1.3
HDAC6-211ENST00000443563 PLA2G1BP04054 148 aaKnown RBP6.9□□□□□ -1.3
HDAC6-211ENST00000443563 CHTF8P0CG12 524 aa6.9□□□□□ -1.3
HDAC6-211ENST00000443563 PTTG1IPP53801 180 aa6.9□□□□□ -1.3
HDAC6-211ENST00000443563 UNQ6190/PRO20217Q6UXQ8 127 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms