RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 C5orf38Q86SI9 138 aa8.25□□□□□ -1.09
PDLIM2-212ENST00000443561 PRSS3P2Q8NHM4 247 aa8.25□□□□□ -1.09
PDLIM2-212ENST00000443561 LINC00310P59036 64 aa8.24□□□□□ -1.09
PDLIM2-212ENST00000443561 SMAGPQ0VAQ4 97 aa8.24□□□□□ -1.09
PDLIM2-212ENST00000443561 TIMM17AQ99595 171 aa8.24□□□□□ -1.09
PDLIM2-212ENST00000443561 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.24□□□□□ -1.09
PDLIM2-212ENST00000443561 IGHV1-58A0A0C4DH39 117 aa8.23□□□□□ -1.09
PDLIM2-212ENST00000443561 PMCHL1Q16048 86 aa8.23□□□□□ -1.09
PDLIM2-212ENST00000443561 FAM19A3Q7Z5A8 133 aa8.23□□□□□ -1.09
PDLIM2-212ENST00000443561 TRGC2P03986 189 aa8.22□□□□□ -1.09
PDLIM2-212ENST00000443561 NPSP0C0P6 89 aa8.22□□□□□ -1.09
PDLIM2-212ENST00000443561 FA2HQ7L5A8 372 aa8.22□□□□□ -1.09
PDLIM2-212ENST00000443561 SCXQ7RTU7 201 aa8.22□□□□□ -1.09
PDLIM2-212ENST00000443561 Q8N1X5 172 aa8.22□□□□□ -1.09
PDLIM2-212ENST00000443561 COX7A2LO14548 114 aa8.21□□□□□ -1.1
PDLIM2-212ENST00000443561 CHTF8P0CG12 524 aa8.21□□□□□ -1.1
PDLIM2-212ENST00000443561 CIRBPQ14011 172 aaKnown RBP8.21□□□□□ -1.1
PDLIM2-212ENST00000443561 PDZD11Q5EBL8 140 aa8.21□□□□□ -1.1
PDLIM2-212ENST00000443561 TEX43Q6ZNM6 134 aa8.21□□□□□ -1.1
PDLIM2-212ENST00000443561 ERASQ7Z444 233 aa8.21□□□□□ -1.1
PDLIM2-212ENST00000443561 IGLV4-69A0A075B6H9 119 aa8.2□□□□□ -1.1
PDLIM2-212ENST00000443561 SMR3BP02814 79 aaPredicted RBP8.2□□□□□ -1.1
PDLIM2-212ENST00000443561 LINC00614P0C842 121 aa8.2□□□□□ -1.1
PDLIM2-212ENST00000443561 AP5S1Q9NUS5 200 aa8.2□□□□□ -1.1
PDLIM2-212ENST00000443561 IGHV3-64A0A075B6Q5 118 aa8.19□□□□□ -1.1
PDLIM2-212ENST00000443561 A0A087WZ39 114 aa8.19□□□□□ -1.1
PDLIM2-212ENST00000443561 KIAA0087Q14695 138 aa8.19□□□□□ -1.1
PDLIM2-212ENST00000443561 CFAP161Q6P656 301 aa8.19□□□□□ -1.1
PDLIM2-212ENST00000443561 Q6ZRU5 148 aa8.19□□□□□ -1.1
PDLIM2-212ENST00000443561 CIRBP-AS1Q8TBR5 109 aa8.19□□□□□ -1.1
PDLIM2-212ENST00000443561 SCGB3A1Q96QR1 104 aa8.19□□□□□ -1.1
PDLIM2-212ENST00000443561 A0A0J9YXV3 536 aa8.18□□□□□ -1.1
PDLIM2-212ENST00000443561 KRTAP10-4P60372 401 aaPredicted RBP8.18□□□□□ -1.1
PDLIM2-212ENST00000443561 CHAC1Q9BUX1 264 aa8.18□□□□□ -1.1
PDLIM2-212ENST00000443561 VCX2Q9H322 139 aa8.18□□□□□ -1.1
PDLIM2-212ENST00000443561 NUPR1O60356 82 aa8.17□□□□□ -1.1
PDLIM2-212ENST00000443561 SPAG11BQ08648 103 aa8.17□□□□□ -1.1
PDLIM2-212ENST00000443561 C10orf25Q5T742 122 aa8.17□□□□□ -1.1
PDLIM2-212ENST00000443561 PKHD1L1Q86WI1 4243 aa8.17□□□□□ -1.1
PDLIM2-212ENST00000443561 IGLV5-45A0A087WSX0 123 aa8.16□□□□□ -1.1
PDLIM2-212ENST00000443561 A0A096LNI7 61 aa8.16□□□□□ -1.1
PDLIM2-212ENST00000443561 HBDP02042 147 aa8.16□□□□□ -1.1
PDLIM2-212ENST00000443561 MALP21145 153 aa8.16□□□□□ -1.1
PDLIM2-212ENST00000443561 Q6ZN92 141 aa8.16□□□□□ -1.1
PDLIM2-212ENST00000443561 SPACA4Q8TDM5 124 aa8.16□□□□□ -1.1
PDLIM2-212ENST00000443561 ORAOV1Q8WV07 137 aa8.16□□□□□ -1.1
PDLIM2-212ENST00000443561 CARD19Q96LW7 228 aa8.16□□□□□ -1.1
PDLIM2-212ENST00000443561 CST9LQ9H4G1 147 aa8.16□□□□□ -1.1
PDLIM2-212ENST00000443561 CDKN2A-AS1Q9UH64 79 aa8.16□□□□□ -1.1
PDLIM2-212ENST00000443561 SYCNQ0VAF6 134 aa8.15□□□□□ -1.1
PDLIM2-212ENST00000443561 OR10D4PQ8NGN7 298 aa8.15□□□□□ -1.1
PDLIM2-212ENST00000443561 C2orf48Q96LS8 159 aa8.15□□□□□ -1.1
PDLIM2-212ENST00000443561 C2orf88Q9BSF0 95 aa8.15□□□□□ -1.1
PDLIM2-212ENST00000443561 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.14□□□□□ -1.11
PDLIM2-212ENST00000443561 G0S2P27469 103 aa8.14□□□□□ -1.11
PDLIM2-212ENST00000443561 Q5VSD8 79 aa8.14□□□□□ -1.11
PDLIM2-212ENST00000443561 LINC01561Q8N1V8 128 aa8.14□□□□□ -1.11
PDLIM2-212ENST00000443561 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.13□□□□□ -1.11
PDLIM2-212ENST00000443561 LINC01549A6NIU2 74 aa8.13□□□□□ -1.11
PDLIM2-212ENST00000443561 SMIM1B2RUZ4 78 aa8.13□□□□□ -1.11
PDLIM2-212ENST00000443561 ZNF561-AS1K7EIQ3 104 aa8.13□□□□□ -1.11
PDLIM2-212ENST00000443561 SERF1AO75920 110 aa8.13□□□□□ -1.11
PDLIM2-212ENST00000443561 PMVKQ15126 192 aa8.13□□□□□ -1.11
PDLIM2-212ENST00000443561 UNQ6190/PRO20217Q6UXQ8 127 aa8.13□□□□□ -1.11
PDLIM2-212ENST00000443561 FAM19A2Q8N3H0 131 aa8.13□□□□□ -1.11
PDLIM2-212ENST00000443561 CHCHD1Q96BP2 118 aaKnown RBP8.13□□□□□ -1.11
PDLIM2-212ENST00000443561 C6orf48Q9UBA6 75 aa8.13□□□□□ -1.11
PDLIM2-212ENST00000443561 A0A087WYN8 130 aa8.12□□□□□ -1.11
PDLIM2-212ENST00000443561 TINCRA0A1B0GVN0 87 aa8.12□□□□□ -1.11
PDLIM2-212ENST00000443561 PAPPA-AS1Q5QFB9 102 aa8.12□□□□□ -1.11
PDLIM2-212ENST00000443561 C2orf82Q6UX34 121 aa8.12□□□□□ -1.11
PDLIM2-212ENST00000443561 LINC00528Q8N1L1 170 aa8.12□□□□□ -1.11
PDLIM2-212ENST00000443561 CAMK2N2Q96S95 79 aa8.12□□□□□ -1.11
PDLIM2-212ENST00000443561 APOMO95445 188 aa8.11□□□□□ -1.11
PDLIM2-212ENST00000443561 IGLC3P0DOY3 106 aa8.11□□□□□ -1.11
PDLIM2-212ENST00000443561 RAB5BP61020 215 aa8.11□□□□□ -1.11
PDLIM2-212ENST00000443561 HERVK_113P63121 156 aa8.11□□□□□ -1.11
PDLIM2-212ENST00000443561 SRRM2Q9UQ35 2752 aaKnown RBP8.1□□□□□ -1.11
PDLIM2-212ENST00000443561 IGKV2-24A0A0C4DH68 120 aa8.1□□□□□ -1.11
PDLIM2-212ENST00000443561 EPM2AB3EWF7 344 aa8.1□□□□□ -1.11
PDLIM2-212ENST00000443561 HIST1H2BKO60814 126 aa8.1□□□□□ -1.11
PDLIM2-212ENST00000443561 ATP6V1G1O75348 118 aa8.1□□□□□ -1.11
PDLIM2-212ENST00000443561 HIST1H2BJP06899 126 aa8.1□□□□□ -1.11
PDLIM2-212ENST00000443561 ZNF22P17026 224 aaPredicted RBP8.1□□□□□ -1.11
PDLIM2-212ENST00000443561 HIST1H2BOP23527 126 aa8.1□□□□□ -1.11
PDLIM2-212ENST00000443561 HIST1H2BBP33778 126 aa8.1□□□□□ -1.11
PDLIM2-212ENST00000443561 HIST1H2BDP58876 126 aa8.1□□□□□ -1.11
PDLIM2-212ENST00000443561 HIST1H2BCP62807 126 aa8.1□□□□□ -1.11
PDLIM2-212ENST00000443561 HIST2H2BEQ16778 126 aa8.1□□□□□ -1.11
PDLIM2-212ENST00000443561 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.1□□□□□ -1.11
PDLIM2-212ENST00000443561 HIST1H2BHQ93079 126 aa8.1□□□□□ -1.11
PDLIM2-212ENST00000443561 HIST1H2BNQ99877 126 aa8.1□□□□□ -1.11
PDLIM2-212ENST00000443561 HIST1H2BMQ99879 126 aa8.1□□□□□ -1.11
PDLIM2-212ENST00000443561 MRPL35Q9NZE8 188 aaKnown RBP8.1□□□□□ -1.11
PDLIM2-212ENST00000443561 PLAC8Q9NZF1 115 aa8.1□□□□□ -1.11
PDLIM2-212ENST00000443561 C11orf86A6NJI1 115 aa8.09□□□□□ -1.11
PDLIM2-212ENST00000443561 PTTG1IPP53801 180 aa8.09□□□□□ -1.11
PDLIM2-212ENST00000443561 RNF151Q2KHN1 245 aa8.09□□□□□ -1.11
PDLIM2-212ENST00000443561 BAGE3Q86Y29 109 aa8.09□□□□□ -1.11
PDLIM2-212ENST00000443561 LINC00469Q8N7U9 141 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms