RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-215ENST00000441728 PRR4Q16378 134 aa12.11□□□□□ -0.47
UBE2F-215ENST00000441728 TMEM241Q24JQ0 296 aa12.11□□□□□ -0.47
UBE2F-215ENST00000441728 GAGE2EQ4V326 116 aa12.11□□□□□ -0.47
UBE2F-215ENST00000441728 GAGE2DQ9UEU5 116 aa12.11□□□□□ -0.47
UBE2F-215ENST00000441728 PEA15Q15121 130 aa12.1□□□□□ -0.47
UBE2F-215ENST00000441728 NRACQ8N912 160 aa12.1□□□□□ -0.47
UBE2F-215ENST00000441728 FAM168BA1KXE4 195 aa12.08□□□□□ -0.48
UBE2F-215ENST00000441728 IFITM10A6NMD0 228 aa12.08□□□□□ -0.48
UBE2F-215ENST00000441728 CKS2P33552 79 aa12.08□□□□□ -0.48
UBE2F-215ENST00000441728 RPL13AP40429 203 aaKnown RBP12.08□□□□□ -0.48
UBE2F-215ENST00000441728 HBBP68871 147 aa12.08□□□□□ -0.48
UBE2F-215ENST00000441728 C20orf78Q9BR46 151 aa12.08□□□□□ -0.48
UBE2F-215ENST00000441728 NAT8BQ9UHF3 227 aa12.08□□□□□ -0.48
UBE2F-215ENST00000441728 TGIF2-C20orf24A0A0A6YYL0 155 aa12.07□□□□□ -0.48
UBE2F-215ENST00000441728 A0A0U1RQV1 116 aa12.07□□□□□ -0.48
UBE2F-215ENST00000441728 M0QXV9 152 aa12.07□□□□□ -0.48
UBE2F-215ENST00000441728 MRPL51Q4U2R6 128 aaKnown RBP12.07□□□□□ -0.48
UBE2F-215ENST00000441728 SPANXA1Q9NS26 97 aa12.07□□□□□ -0.48
UBE2F-215ENST00000441728 LINC00862A6NCI5 91 aa12.06□□□□□ -0.48
UBE2F-215ENST00000441728 C9JQL5 133 aa12.06□□□□□ -0.48
UBE2F-215ENST00000441728 TLX1NBP0CAT3 122 aa12.06□□□□□ -0.48
UBE2F-215ENST00000441728 RPL39P62891 51 aaKnown RBP12.06□□□□□ -0.48
UBE2F-215ENST00000441728 UNQ6190/PRO20217Q6UXQ8 127 aa12.06□□□□□ -0.48
UBE2F-215ENST00000441728 FAM104BQ5XKR9 115 aa12.05□□□□□ -0.48
UBE2F-215ENST00000441728 C6orf48Q9UBA6 75 aa12.05□□□□□ -0.48
UBE2F-215ENST00000441728 NAT8Q9UHE5 227 aa12.05□□□□□ -0.48
UBE2F-215ENST00000441728 V9GYV3 84 aa12.05□□□□□ -0.48
UBE2F-215ENST00000441728 IGHV3OR16-9A0A0B4J2B5 98 aa12.04□□□□□ -0.48
UBE2F-215ENST00000441728 SRSF3P84103 164 aaKnown RBP12.04□□□□□ -0.48
UBE2F-215ENST00000441728 C10orf25Q5T742 122 aa12.04□□□□□ -0.48
UBE2F-215ENST00000441728 PACRGQ96M98 296 aaPredicted RBP12.04□□□□□ -0.48
UBE2F-215ENST00000441728 RPL23P62829 140 aaKnown RBP12.03□□□□□ -0.48
UBE2F-215ENST00000441728 TNFRSF6BO95407 300 aa12.02□□□□□ -0.49
UBE2F-215ENST00000441728 MRPS36P82909 103 aaKnown RBP12.02□□□□□ -0.49
UBE2F-215ENST00000441728 SMIM2Q9BVW6 85 aa12.02□□□□□ -0.49
UBE2F-215ENST00000441728 LPAP08519 4548 aa12.01□□□□□ -0.49
UBE2F-215ENST00000441728 A0A1B0GW15 77 aa12.01□□□□□ -0.49
UBE2F-215ENST00000441728 S100A8P05109 93 aa12.01□□□□□ -0.49
UBE2F-215ENST00000441728 IFI27P40305 119 aaPredicted RBP12.01□□□□□ -0.49
UBE2F-215ENST00000441728 RPL32P62910 135 aaKnown RBP12.01□□□□□ -0.49
UBE2F-215ENST00000441728 KRTAP11-1Q8IUC1 163 aa12.01□□□□□ -0.49
UBE2F-215ENST00000441728 TRBV24-1A0A075B6N3 115 aa12□□□□□ -0.49
UBE2F-215ENST00000441728 F8W036 122 aa12□□□□□ -0.49
UBE2F-215ENST00000441728 RAB5AP20339 215 aa12□□□□□ -0.49
UBE2F-215ENST00000441728 RAB14P61106 215 aa12□□□□□ -0.49
UBE2F-215ENST00000441728 ADIRFQ15847 76 aa12□□□□□ -0.49
UBE2F-215ENST00000441728 TRBV30A0A0K0K1B3 111 aa11.99□□□□□ -0.49
UBE2F-215ENST00000441728 D6R8Y8 96 aa11.98□□□□□ -0.49
UBE2F-215ENST00000441728 NDUFC2-KCTD14E9PQ53 114 aa11.98□□□□□ -0.49
UBE2F-215ENST00000441728 KRTAP1-4P0C5Y4 121 aa11.97□□□□□ -0.49
UBE2F-215ENST00000441728 CARHSP1Q9Y2V2 147 aaKnown RBP11.97□□□□□ -0.49
UBE2F-215ENST00000441728 PRSS2P07478 247 aa11.96□□□□□ -0.49
UBE2F-215ENST00000441728 SMIM27A0A1W2PRY6 76 aa11.95□□□□□ -0.5
UBE2F-215ENST00000441728 MRPL54Q6P161 138 aaKnown RBP11.95□□□□□ -0.5
UBE2F-215ENST00000441728 C2orf88Q9BSF0 95 aa11.95□□□□□ -0.5
UBE2F-215ENST00000441728 NPYP01303 97 aa11.94□□□□□ -0.5
UBE2F-215ENST00000441728 PPBPP02775 128 aa11.94□□□□□ -0.5
UBE2F-215ENST00000441728 C2orf82Q6UX34 121 aa11.94□□□□□ -0.5
UBE2F-215ENST00000441728 ZNF861PO60384 105 aa11.93□□□□□ -0.5
UBE2F-215ENST00000441728 TSPAN13O95857 204 aa11.93□□□□□ -0.5
UBE2F-215ENST00000441728 CKS1BP61024 79 aa11.93□□□□□ -0.5
UBE2F-215ENST00000441728 KIAA0087Q14695 138 aa11.93□□□□□ -0.5
UBE2F-215ENST00000441728 CLLU1Q5K131 121 aa11.93□□□□□ -0.5
UBE2F-215ENST00000441728 TEX43Q6ZNM6 134 aa11.93□□□□□ -0.5
UBE2F-215ENST00000441728 TMEM141Q96I45 108 aa11.93□□□□□ -0.5
UBE2F-215ENST00000441728 NUPR1O60356 82 aa11.92□□□□□ -0.5
UBE2F-215ENST00000441728 LBHQ53QV2 105 aaPredicted RBP11.92□□□□□ -0.5
UBE2F-215ENST00000441728 LINC00242Q5T6M2 205 aa11.92□□□□□ -0.5
UBE2F-215ENST00000441728 Q6ZN92 141 aa11.92□□□□□ -0.5
UBE2F-215ENST00000441728 FAM104AQ969W3 186 aa11.92□□□□□ -0.5
UBE2F-215ENST00000441728 TOMM7Q9P0U1 55 aa11.92□□□□□ -0.5
UBE2F-215ENST00000441728 C9orf129Q5T035 196 aaKnown RBP11.91□□□□□ -0.5
UBE2F-215ENST00000441728 KRTAP7-1Q8IUC3 87 aa11.91□□□□□ -0.5
UBE2F-215ENST00000441728 ORMDL3Q8N138 153 aa11.91□□□□□ -0.5
UBE2F-215ENST00000441728 PYGO1Q9Y3Y4 419 aa11.9□□□□□ -0.5
UBE2F-215ENST00000441728 IGLV4-3A0A075B6K6 122 aa11.89□□□□□ -0.51
UBE2F-215ENST00000441728 PNRC1Q12796 327 aaPredicted RBP11.89□□□□□ -0.51
UBE2F-215ENST00000441728 C6orf226Q5I0X4 101 aa11.89□□□□□ -0.51
UBE2F-215ENST00000441728 LINC01561Q8N1V8 128 aa11.89□□□□□ -0.51
UBE2F-215ENST00000441728 LINC00469Q8N7U9 141 aa11.89□□□□□ -0.51
UBE2F-215ENST00000441728 TMEM136Q6ZRR5 245 aa11.88□□□□□ -0.51
UBE2F-215ENST00000441728 PRELID3AQ96N28 172 aa11.88□□□□□ -0.51
UBE2F-215ENST00000441728 RPL28P46779 137 aaKnown RBP11.87□□□□□ -0.51
UBE2F-215ENST00000441728 IFITM2Q01629 132 aa11.87□□□□□ -0.51
UBE2F-215ENST00000441728 CTDSP1Q9GZU7 261 aa11.87□□□□□ -0.51
UBE2F-215ENST00000441728 C22orf24Q9Y442 160 aa11.87□□□□□ -0.51
UBE2F-215ENST00000441728 TYMSOSQ8TAI1 123 aa11.86□□□□□ -0.51
UBE2F-215ENST00000441728 VCX2Q9H322 139 aa11.86□□□□□ -0.51
UBE2F-215ENST00000441728 LOC389332A0A1B0GUA5 103 aa11.85□□□□□ -0.51
UBE2F-215ENST00000441728 ALKBH7Q9BT30 221 aaPredicted RBP11.85□□□□□ -0.51
UBE2F-215ENST00000441728 MAP1LC3AQ9H492 121 aa11.85□□□□□ -0.51
UBE2F-215ENST00000441728 XAGE1AQ9HD64 81 aa11.85□□□□□ -0.51
UBE2F-215ENST00000441728 CYSLTR1Q9Y271 337 aa11.85□□□□□ -0.51
UBE2F-215ENST00000441728 A0A1B0GXF2 115 aa11.84□□□□□ -0.51
UBE2F-215ENST00000441728 UQCC3Q6UW78 93 aa11.84□□□□□ -0.51
UBE2F-215ENST00000441728 ANAPC16Q96DE5 110 aa11.84□□□□□ -0.51
UBE2F-215ENST00000441728 MT-ND4LP03901 98 aa11.83□□□□□ -0.52
UBE2F-215ENST00000441728 CRYGAP11844 174 aa11.83□□□□□ -0.52
UBE2F-215ENST00000441728 ATP5L2Q7Z4Y8 100 aa11.83□□□□□ -0.52
UBE2F-215ENST00000441728 Q8IZM0 81 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms