RNA–Protein interactions for RNA: ENST00000440431.6

SCN3A-204, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 4,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-204ENST00000440431 IGLV10-54A0A075B6I4 117 aa3.34□□□□□ -1.88
SCN3A-204ENST00000440431 A4D1N5 150 aa3.34□□□□□ -1.88
SCN3A-204ENST00000440431 M0QY20 66 aa3.34□□□□□ -1.88
SCN3A-204ENST00000440431 CFC1BP0CG36 223 aa3.34□□□□□ -1.88
SCN3A-204ENST00000440431 CFC1P0CG37 223 aa3.34□□□□□ -1.88
SCN3A-204ENST00000440431 UBE2AP49459 152 aa3.34□□□□□ -1.88
SCN3A-204ENST00000440431 MRPS36P82909 103 aaKnown RBP3.34□□□□□ -1.88
SCN3A-204ENST00000440431 OXLD1Q5BKU9 147 aa3.34□□□□□ -1.88
SCN3A-204ENST00000440431 NEXN-AS1Q8NBZ9 246 aa3.34□□□□□ -1.88
SCN3A-204ENST00000440431 SMR3AQ99954 134 aa3.34□□□□□ -1.88
SCN3A-204ENST00000440431 ESM1Q9NQ30 184 aa3.34□□□□□ -1.88
SCN3A-204ENST00000440431 DKK2Q9UBU2 259 aa3.34□□□□□ -1.88
SCN3A-204ENST00000440431 FSHBP01225 129 aa3.33□□□□□ -1.88
SCN3A-204ENST00000440431 PDE6GP18545 87 aa3.33□□□□□ -1.88
SCN3A-204ENST00000440431 DEFB1P60022 68 aa3.33□□□□□ -1.88
SCN3A-204ENST00000440431 ORMDL1Q9P0S3 153 aa3.33□□□□□ -1.88
SCN3A-204ENST00000440431 LINC00474Q9P2X8 69 aa3.33□□□□□ -1.88
SCN3A-204ENST00000440431 C9orf118A6NHY6 69 aa3.33□□□□□ -1.88
SCN3A-204ENST00000440431 FUSP35637 526 aaKnown RBP eCLIP3.33□□□□□ -1.88
SCN3A-204ENST00000440431 GAGE2BQ13066 116 aa3.33□□□□□ -1.88
SCN3A-204ENST00000440431 B9D2Q9BPU9 175 aa3.33□□□□□ -1.88
SCN3A-204ENST00000440431 CNFNQ9BYD5 112 aa3.33□□□□□ -1.88
SCN3A-204ENST00000440431 C2CD3Q4AC94 2353 aa3.33□□□□□ -1.88
SCN3A-204ENST00000440431 IBA57-AS1B1ANH7 110 aa3.33□□□□□ -1.88
SCN3A-204ENST00000440431 C9JAW5 83 aa3.33□□□□□ -1.88
SCN3A-204ENST00000440431 KRTAP1-1Q07627 177 aa3.33□□□□□ -1.88
SCN3A-204ENST00000440431 RNASE13Q5GAN3 156 aaKnown RBP3.33□□□□□ -1.88
SCN3A-204ENST00000440431 C7orf33Q8WU49 177 aa3.33□□□□□ -1.88
SCN3A-204ENST00000440431 CHCHD10Q8WYQ3 142 aaPredicted RBP3.33□□□□□ -1.88
SCN3A-204ENST00000440431 DIRC1Q969H9 104 aa3.33□□□□□ -1.88
SCN3A-204ENST00000440431 TP73-AS1Q9UF72 201 aa3.33□□□□□ -1.88
SCN3A-204ENST00000440431 UNC79Q9P2D8 2635 aa3.33□□□□□ -1.88
SCN3A-204ENST00000440431 FRMD6-AS1P0C7T7 363 aa3.32□□□□□ -1.88
SCN3A-204ENST00000440431 CD164L2Q6UWJ8 174 aa3.32□□□□□ -1.88
SCN3A-204ENST00000440431 U3KQK5 164 aa3.32□□□□□ -1.88
SCN3A-204ENST00000440431 F8W1H4 67 aa3.32□□□□□ -1.88
SCN3A-204ENST00000440431 MRPS12O15235 138 aaKnown RBP3.32□□□□□ -1.88
SCN3A-204ENST00000440431 SYCNQ0VAF6 134 aa3.32□□□□□ -1.88
SCN3A-204ENST00000440431 GAGE2EQ4V326 116 aa3.32□□□□□ -1.88
SCN3A-204ENST00000440431 SIGMAR1Q99720 223 aa3.32□□□□□ -1.88
SCN3A-204ENST00000440431 GAGE2DQ9UEU5 116 aa3.32□□□□□ -1.88
SCN3A-204ENST00000440431 DNAH3Q8TD57 4116 aa3.32□□□□□ -1.88
SCN3A-204ENST00000440431 RNASE3P12724 160 aaKnown RBP3.32□□□□□ -1.88
SCN3A-204ENST00000440431 RPL39P62891 51 aaKnown RBP3.32□□□□□ -1.88
SCN3A-204ENST00000440431 LINC00269Q8N2A0 174 aa3.32□□□□□ -1.88
SCN3A-204ENST00000440431 TRRAPQ9Y4A5 3859 aa3.32□□□□□ -1.88
SCN3A-204ENST00000440431 JMJD7-PLA2G4BH0Y9G9 81 aa3.31□□□□□ -1.88
SCN3A-204ENST00000440431 NDUFB1O75438 58 aa3.31□□□□□ -1.88
SCN3A-204ENST00000440431 IGLV2-11P01706 119 aa3.31□□□□□ -1.88
SCN3A-204ENST00000440431 ODF1Q14990 250 aa3.31□□□□□ -1.88
SCN3A-204ENST00000440431 BEAN1Q3B7T3 259 aa3.31□□□□□ -1.88
SCN3A-204ENST00000440431 C18orf65Q6ZTR6 163 aa3.31□□□□□ -1.88
SCN3A-204ENST00000440431 PPDPFLQ8WWR9 84 aa3.31□□□□□ -1.88
SCN3A-204ENST00000440431 IGLV4-69A0A075B6H9 119 aa3.31□□□□□ -1.88
SCN3A-204ENST00000440431 ACYP1P07311 99 aa3.31□□□□□ -1.88
SCN3A-204ENST00000440431 POLR2KP53803 58 aaKnown RBP3.31□□□□□ -1.88
SCN3A-204ENST00000440431 FHL3Q13643 280 aa3.31□□□□□ -1.88
SCN3A-204ENST00000440431 C12orf74Q32Q52 190 aa3.31□□□□□ -1.88
SCN3A-204ENST00000440431 GDF5OSQ5U4N7 250 aa3.31□□□□□ -1.88
SCN3A-204ENST00000440431 CARD19Q96LW7 228 aa3.31□□□□□ -1.88
SCN3A-204ENST00000440431 Q6ZUT4 128 aa3.31□□□□□ -1.88
SCN3A-204ENST00000440431 SPANXCQ9NY87 97 aa3.31□□□□□ -1.88
SCN3A-204ENST00000440431 TIMM17BO60830 172 aa3.3□□□□□ -1.88
SCN3A-204ENST00000440431 CRIP1P50238 77 aa3.3□□□□□ -1.88
SCN3A-204ENST00000440431 UBE2D3P61077 147 aa3.3□□□□□ -1.88
SCN3A-204ENST00000440431 UBE2D2P62837 147 aa3.3□□□□□ -1.88
SCN3A-204ENST00000440431 IGLV4-3A0A075B6K6 122 aa3.3□□□□□ -1.88
SCN3A-204ENST00000440431 ZNF575Q86XF7 245 aa3.3□□□□□ -1.88
SCN3A-204ENST00000440431 A0A0J9YWU9 116 aa3.3□□□□□ -1.88
SCN3A-204ENST00000440431 ZNF706Q9Y5V0 76 aaPredicted RBP3.3□□□□□ -1.88
SCN3A-204ENST00000440431 LOC107984640A0A0U1RRK4 108 aa3.29□□□□□ -1.88
SCN3A-204ENST00000440431 K7EP34 96 aa3.29□□□□□ -1.88
SCN3A-204ENST00000440431 COX7BP24311 80 aa3.29□□□□□ -1.88
SCN3A-204ENST00000440431 LINC01561Q8N1V8 128 aa3.29□□□□□ -1.88
SCN3A-204ENST00000440431 MIR7-3HGQ8N6C7 128 aa3.29□□□□□ -1.88
SCN3A-204ENST00000440431 COX17Q14061 63 aa3.29□□□□□ -1.88
SCN3A-204ENST00000440431 GAGE2AQ6NT46 116 aa3.29□□□□□ -1.88
SCN3A-204ENST00000440431 MUSTN1Q8IVN3 82 aa3.29□□□□□ -1.88
SCN3A-204ENST00000440431 WFDC9Q8NEX5 89 aa3.29□□□□□ -1.88
SCN3A-204ENST00000440431 CSDC2Q9Y534 153 aaKnown RBP3.29□□□□□ -1.88
SCN3A-204ENST00000440431 H3BNG1 76 aa3.29□□□□□ -1.88
SCN3A-204ENST00000440431 BAALC-AS2P0C853 105 aa3.29□□□□□ -1.88
SCN3A-204ENST00000440431 TMEM256-PLSCR3K7ERE1 68 aa3.29□□□□□ -1.88
SCN3A-204ENST00000440431 C1orf158Q8N1D5 194 aa3.29□□□□□ -1.88
SCN3A-204ENST00000440431 RNF185Q96GF1 192 aa3.29□□□□□ -1.88
SCN3A-204ENST00000440431 SPANXB1Q9NS25 103 aaPredicted RBP3.29□□□□□ -1.88
SCN3A-204ENST00000440431 MTORP42345 2549 aa3.28□□□□□ -1.88
SCN3A-204ENST00000440431 F8P00451 2351 aa3.28□□□□□ -1.88
SCN3A-204ENST00000440431 A0A1W2PPM0 123 aa3.28□□□□□ -1.88
SCN3A-204ENST00000440431 LY6G6CO95867 125 aa3.28□□□□□ -1.88
SCN3A-204ENST00000440431 ZFAND6Q6FIF0 208 aa3.28□□□□□ -1.88
SCN3A-204ENST00000440431 SS18L2Q9UHA2 77 aa3.28□□□□□ -1.88
SCN3A-204ENST00000440431 VWFP04275 2813 aa3.28□□□□□ -1.88
SCN3A-204ENST00000440431 H3BT86 120 aa3.28□□□□□ -1.88
SCN3A-204ENST00000440431 LINC00959A0A1B0GUT2 108 aa3.28□□□□□ -1.88
SCN3A-204ENST00000440431 A0A1B0GUV1 79 aa3.28□□□□□ -1.88
SCN3A-204ENST00000440431 ZNF22P17026 224 aaPredicted RBP3.28□□□□□ -1.88
SCN3A-204ENST00000440431 NANOS2P60321 138 aaKnown RBP3.28□□□□□ -1.88
SCN3A-204ENST00000440431 HIST1H4AP62805 103 aaKnown RBP3.28□□□□□ -1.88
SCN3A-204ENST00000440431 HIST2H2BDQ6DRA6 164 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms