RNA–Protein interactions for RNA: ENST00000440289.6

PTPRJ-202, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 1 (best) BASIC

Gene PTPRJ, Length 3,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-202ENST00000440289 ODF3L2Q3SX64 289 aa13.1□□□□□ -0.31
PTPRJ-202ENST00000440289 Q6YL49 198 aa13.1□□□□□ -0.31
PTPRJ-202ENST00000440289 ATP5G1P05496 136 aa13.1□□□□□ -0.31
PTPRJ-202ENST00000440289 RNASE1P07998 156 aaKnown RBP13.1□□□□□ -0.31
PTPRJ-202ENST00000440289 SMIM20Q8N5G0 67 aa13.1□□□□□ -0.31
PTPRJ-202ENST00000440289 DEFB130BP0DP73 79 aa13.09□□□□□ -0.31
PTPRJ-202ENST00000440289 DEFB130AP0DP74 79 aa13.09□□□□□ -0.31
PTPRJ-202ENST00000440289 HERVK_113P63121 156 aa13.09□□□□□ -0.31
PTPRJ-202ENST00000440289 DAZ2Q13117 558 aaKnown RBP13.09□□□□□ -0.31
PTPRJ-202ENST00000440289 NTM-AS1Q6ZSK4 140 aa13.09□□□□□ -0.31
PTPRJ-202ENST00000440289 DAZ4Q86SG3 579 aaKnown RBP13.09□□□□□ -0.31
PTPRJ-202ENST00000440289 DAZ3Q9NR90 486 aaKnown RBP13.09□□□□□ -0.31
PTPRJ-202ENST00000440289 FAM236AA0A1B0GUQ0 79 aa13.08□□□□□ -0.32
PTPRJ-202ENST00000440289 FAM236BA0A1B0GV22 79 aa13.08□□□□□ -0.32
PTPRJ-202ENST00000440289 TRGV4A0A0C4DH28 118 aa13.08□□□□□ -0.32
PTPRJ-202ENST00000440289 BAALC-AS2P0C853 105 aa13.08□□□□□ -0.32
PTPRJ-202ENST00000440289 C1orf158Q8N1D5 194 aa13.08□□□□□ -0.32
PTPRJ-202ENST00000440289 SMIM1B2RUZ4 78 aa13.08□□□□□ -0.32
PTPRJ-202ENST00000440289 NDUFA1O15239 70 aa13.07□□□□□ -0.32
PTPRJ-202ENST00000440289 IGHV4-31P0DP07 118 aa13.07□□□□□ -0.32
PTPRJ-202ENST00000440289 MIR7-3HGQ8N6C7 128 aa13.07□□□□□ -0.32
PTPRJ-202ENST00000440289 H3BT86 120 aa13.06□□□□□ -0.32
PTPRJ-202ENST00000440289 K7EQD1 137 aa13.06□□□□□ -0.32
PTPRJ-202ENST00000440289 FAM218AQ96MZ4 157 aa13.06□□□□□ -0.32
PTPRJ-202ENST00000440289 PAX4O43316 350 aa13.04□□□□□ -0.32
PTPRJ-202ENST00000440289 SLPIP03973 132 aa13.04□□□□□ -0.32
PTPRJ-202ENST00000440289 ESM1Q9NQ30 184 aa13.04□□□□□ -0.32
PTPRJ-202ENST00000440289 CRPP02741 224 aa13.03□□□□□ -0.32
PTPRJ-202ENST00000440289 DNAL4O96015 105 aa13.03□□□□□ -0.32
PTPRJ-202ENST00000440289 TMEM243Q9BU79 118 aa13.02□□□□□ -0.33
PTPRJ-202ENST00000440289 COX7A2LO14548 114 aa13.02□□□□□ -0.33
PTPRJ-202ENST00000440289 DSCR9P59020 149 aa13.02□□□□□ -0.33
PTPRJ-202ENST00000440289 CCL24O00175 119 aa13.01□□□□□ -0.33
PTPRJ-202ENST00000440289 ZNF843Q8N446 348 aa13.01□□□□□ -0.33
PTPRJ-202ENST00000440289 SND1-IT1Q9HBX3 110 aa13.01□□□□□ -0.33
PTPRJ-202ENST00000440289 XCL1P47992 114 aa13.01□□□□□ -0.33
PTPRJ-202ENST00000440289 IGLV4-60A0A075B6I1 120 aa13□□□□□ -0.33
PTPRJ-202ENST00000440289 TIRAPP58753 221 aa13□□□□□ -0.33
PTPRJ-202ENST00000440289 DNAJC30Q96LL9 226 aa13□□□□□ -0.33
PTPRJ-202ENST00000440289 C4orf3Q8WVX3 66 aa12.99□□□□□ -0.33
PTPRJ-202ENST00000440289 C14orf132Q9NPU4 83 aa12.99□□□□□ -0.33
PTPRJ-202ENST00000440289 CDC42SE2Q9NRR3 84 aa12.99□□□□□ -0.33
PTPRJ-202ENST00000440289 CR1P17927 2039 aa12.99□□□□□ -0.33
PTPRJ-202ENST00000440289 IGKV3D-7A0A0C4DH55 119 aa12.98□□□□□ -0.33
PTPRJ-202ENST00000440289 DEFB4AO15263 64 aa12.97□□□□□ -0.33
PTPRJ-202ENST00000440289 SMCR5Q8TEV8 140 aa12.97□□□□□ -0.33
PTPRJ-202ENST00000440289 J3QLI3 93 aa12.97□□□□□ -0.33
PTPRJ-202ENST00000440289 UNC79Q9P2D8 2635 aa12.97□□□□□ -0.33
PTPRJ-202ENST00000440289 IGLV10-54A0A075B6I4 117 aa12.96□□□□□ -0.33
PTPRJ-202ENST00000440289 LINC00337Q8N6G1 96 aa12.96□□□□□ -0.33
PTPRJ-202ENST00000440289 WFDC11Q8NEX6 87 aa12.96□□□□□ -0.33
PTPRJ-202ENST00000440289 A0A087WYN8 130 aa12.95□□□□□ -0.34
PTPRJ-202ENST00000440289 A0A096LNT2 108 aa12.95□□□□□ -0.34
PTPRJ-202ENST00000440289 PRR3P79522 188 aaKnown RBP12.95□□□□□ -0.34
PTPRJ-202ENST00000440289 OTOGQ6ZRI0 2925 aa12.95□□□□□ -0.34
PTPRJ-202ENST00000440289 TENM1Q9UKZ4 2725 aa12.95□□□□□ -0.34
PTPRJ-202ENST00000440289 LECT2O14960 151 aa12.95□□□□□ -0.34
PTPRJ-202ENST00000440289 C6orf226Q5I0X4 101 aa12.95□□□□□ -0.34
PTPRJ-202ENST00000440289 COX7B2Q8TF08 81 aa12.95□□□□□ -0.34
PTPRJ-202ENST00000440289 SDIM1Q6ZPB5 146 aa12.95□□□□□ -0.34
PTPRJ-202ENST00000440289 BEAN1Q3B7T3 259 aa12.94□□□□□ -0.34
PTPRJ-202ENST00000440289 C9orf129Q5T035 196 aaKnown RBP12.94□□□□□ -0.34
PTPRJ-202ENST00000440289 IGLV5-39A0A0G2JS06 123 aa12.93□□□□□ -0.34
PTPRJ-202ENST00000440289 ATRQ13535 2644 aa12.93□□□□□ -0.34
PTPRJ-202ENST00000440289 DNAJC9-AS1A6NH13 148 aa12.93□□□□□ -0.34
PTPRJ-202ENST00000440289 TRRAPQ9Y4A5 3859 aa12.92□□□□□ -0.34
PTPRJ-202ENST00000440289 NCR3O14931 201 aa12.92□□□□□ -0.34
PTPRJ-202ENST00000440289 HERV-K104P63124 156 aa12.92□□□□□ -0.34
PTPRJ-202ENST00000440289 KLK5Q9Y337 293 aaPredicted RBP12.92□□□□□ -0.34
PTPRJ-202ENST00000440289 TIMM17BO60830 172 aa12.91□□□□□ -0.34
PTPRJ-202ENST00000440289 SMIM11BQ8TCY0 68 aa12.91□□□□□ -0.34
PTPRJ-202ENST00000440289 IGLV5-45A0A087WSX0 123 aa12.9□□□□□ -0.34
PTPRJ-202ENST00000440289 F5H768 121 aa12.9□□□□□ -0.34
PTPRJ-202ENST00000440289 DEFB113Q30KQ7 82 aa12.9□□□□□ -0.34
PTPRJ-202ENST00000440289 C9orf153Q5TBE3 101 aa12.9□□□□□ -0.34
PTPRJ-202ENST00000440289 EDA2RQ9HAV5 297 aa12.9□□□□□ -0.34
PTPRJ-202ENST00000440289 M0QXV9 152 aa12.89□□□□□ -0.35
PTPRJ-202ENST00000440289 MALP21145 153 aa12.89□□□□□ -0.35
PTPRJ-202ENST00000440289 CCL18P55774 89 aa12.89□□□□□ -0.35
PTPRJ-202ENST00000440289 A0A087WVE0 104 aa12.88□□□□□ -0.35
PTPRJ-202ENST00000440289 COPS9Q8WXC6 57 aa12.88□□□□□ -0.35
PTPRJ-202ENST00000440289 LINC00526Q96FQ7 95 aa12.88□□□□□ -0.35
PTPRJ-202ENST00000440289 HTN3P15516 51 aa12.88□□□□□ -0.35
PTPRJ-202ENST00000440289 IGKV2-28A0A075B6P5 120 aa12.87□□□□□ -0.35
PTPRJ-202ENST00000440289 IGKV2D-28P01615 120 aa12.87□□□□□ -0.35
PTPRJ-202ENST00000440289 RNF152Q8N8N0 203 aa12.87□□□□□ -0.35
PTPRJ-202ENST00000440289 PDZD2O15018 2839 aa12.87□□□□□ -0.35
PTPRJ-202ENST00000440289 SHISA2Q6UWI4 295 aa12.87□□□□□ -0.35
PTPRJ-202ENST00000440289 TRAV13-2A0A0B4J235 113 aa12.86□□□□□ -0.35
PTPRJ-202ENST00000440289 HIST1H4AP62805 103 aaKnown RBP12.86□□□□□ -0.35
PTPRJ-202ENST00000440289 MRPL23Q16540 153 aaKnown RBP12.86□□□□□ -0.35
PTPRJ-202ENST00000440289 TRBV10-1A0A0K0K1A3 114 aa12.86□□□□□ -0.35
PTPRJ-202ENST00000440289 Q8N3U1 123 aa12.86□□□□□ -0.35
PTPRJ-202ENST00000440289 GYPEP15421 78 aa12.85□□□□□ -0.35
PTPRJ-202ENST00000440289 C9orf116Q5BN46 136 aaPredicted RBP12.84□□□□□ -0.35
PTPRJ-202ENST00000440289 WFDC9Q8NEX5 89 aa12.84□□□□□ -0.35
PTPRJ-202ENST00000440289 TEP1Q99973 2627 aaKnown RBP12.83□□□□□ -0.36
PTPRJ-202ENST00000440289 TRBV6-8A0A0A6YYG3 113 aa12.83□□□□□ -0.36
PTPRJ-202ENST00000440289 Q6Q795 121 aa12.83□□□□□ -0.36
PTPRJ-202ENST00000440289 GIG44P09565 113 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms