RNA–Protein interactions for RNA: ENST00000440264.5

CCNA1-202, Transcript of cyclin A1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCNA1, Length 1,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-202ENST00000440264 DNAH9Q9NYC9 4486 aa12.91□□□□□ -0.34
CCNA1-202ENST00000440264 A0A0J9YXY3 114 aa12.9□□□□□ -0.34
CCNA1-202ENST00000440264 HTN3P15516 51 aa12.9□□□□□ -0.34
CCNA1-202ENST00000440264 IGHV3-30P01768 117 aa12.89□□□□□ -0.35
CCNA1-202ENST00000440264 IGHV3-30-5P0DP03 117 aa12.89□□□□□ -0.35
CCNA1-202ENST00000440264 TM2D3Q9BRN9 247 aa12.89□□□□□ -0.35
CCNA1-202ENST00000440264 IGHV3OR16-9A0A0B4J2B5 98 aa12.89□□□□□ -0.35
CCNA1-202ENST00000440264 A0A0J9YWU9 116 aa12.89□□□□□ -0.35
CCNA1-202ENST00000440264 H3BNG1 76 aa12.89□□□□□ -0.35
CCNA1-202ENST00000440264 Q6ZTC4 211 aa12.89□□□□□ -0.35
CCNA1-202ENST00000440264 NDUFA12Q9UI09 145 aa12.89□□□□□ -0.35
CCNA1-202ENST00000440264 ICOSQ9Y6W8 199 aa12.89□□□□□ -0.35
CCNA1-202ENST00000440264 K7ERJ3 54 aa12.87□□□□□ -0.35
CCNA1-202ENST00000440264 SH2D6Q7Z4S9 175 aa12.87□□□□□ -0.35
CCNA1-202ENST00000440264 Q8N3U1 123 aa12.87□□□□□ -0.35
CCNA1-202ENST00000440264 LINC00959A0A1B0GUT2 108 aa12.86□□□□□ -0.35
CCNA1-202ENST00000440264 C9orf118A6NHY6 69 aa12.86□□□□□ -0.35
CCNA1-202ENST00000440264 NHP2Q9NX24 153 aaKnown RBP12.86□□□□□ -0.35
CCNA1-202ENST00000440264 NDUFA1O15239 70 aa12.86□□□□□ -0.35
CCNA1-202ENST00000440264 LELP1Q5T871 98 aa12.86□□□□□ -0.35
CCNA1-202ENST00000440264 SMIM13P0DJ93 91 aa12.85□□□□□ -0.35
CCNA1-202ENST00000440264 PTTG1IPP53801 180 aa12.85□□□□□ -0.35
CCNA1-202ENST00000440264 TMEM262E9PQX1 116 aa12.84□□□□□ -0.35
CCNA1-202ENST00000440264 SRSF9Q13242 221 aaKnown RBP eCLIP12.84□□□□□ -0.35
CCNA1-202ENST00000440264 ZNF625Q96I27 306 aaPredicted RBP12.84□□□□□ -0.35
CCNA1-202ENST00000440264 ADAMTSL4-AS1Q5T5F5 129 aa12.83□□□□□ -0.36
CCNA1-202ENST00000440264 LYPD5Q6UWN5 251 aa12.83□□□□□ -0.36
CCNA1-202ENST00000440264 SPATA25Q9BR10 227 aa12.83□□□□□ -0.36
CCNA1-202ENST00000440264 A0A087WZ39 114 aa12.82□□□□□ -0.36
CCNA1-202ENST00000440264 IGKV3OR2-268A0A0C4DH90 116 aa12.82□□□□□ -0.36
CCNA1-202ENST00000440264 NANOS2P60321 138 aaKnown RBP12.82□□□□□ -0.36
CCNA1-202ENST00000440264 RAB37Q96AX2 223 aa12.82□□□□□ -0.36
CCNA1-202ENST00000440264 TIMM17BO60830 172 aa12.81□□□□□ -0.36
CCNA1-202ENST00000440264 TMEM238C9JI98 176 aa12.8□□□□□ -0.36
CCNA1-202ENST00000440264 EIF4EBP3O60516 100 aaPredicted RBP12.8□□□□□ -0.36
CCNA1-202ENST00000440264 C11orf45Q8TAV5 145 aa12.8□□□□□ -0.36
CCNA1-202ENST00000440264 NAA38Q9BRA0 125 aaKnown RBP12.8□□□□□ -0.36
CCNA1-202ENST00000440264 SPANXDQ9BXN6 97 aa12.8□□□□□ -0.36
CCNA1-202ENST00000440264 SPANXCQ9NY87 97 aa12.8□□□□□ -0.36
CCNA1-202ENST00000440264 H3BUT2 72 aa12.79□□□□□ -0.36
CCNA1-202ENST00000440264 CCL25O15444 150 aa12.79□□□□□ -0.36
CCNA1-202ENST00000440264 UBE2V1Q13404 147 aa12.79□□□□□ -0.36
CCNA1-202ENST00000440264 LINC00269Q8N2A0 174 aa12.79□□□□□ -0.36
CCNA1-202ENST00000440264 Q9H8V8 135 aa12.79□□□□□ -0.36
CCNA1-202ENST00000440264 IGLL5B9A064 214 aa12.77□□□□□ -0.36
CCNA1-202ENST00000440264 CLPSL2Q6UWE3 100 aa12.77□□□□□ -0.36
CCNA1-202ENST00000440264 MUSTN1Q8IVN3 82 aa12.77□□□□□ -0.36
CCNA1-202ENST00000440264 TMEM238LA0A1B0GVL6 79 aa12.76□□□□□ -0.37
CCNA1-202ENST00000440264 A0A1W2PPM0 123 aa12.76□□□□□ -0.37
CCNA1-202ENST00000440264 A6NJY4 79 aa12.76□□□□□ -0.37
CCNA1-202ENST00000440264 CFC1BP0CG36 223 aa12.76□□□□□ -0.37
CCNA1-202ENST00000440264 CFC1P0CG37 223 aa12.76□□□□□ -0.37
CCNA1-202ENST00000440264 PRR34Q9NV39 138 aa12.76□□□□□ -0.37
CCNA1-202ENST00000440264 DEFB131BA0A096LNP1 70 aa12.76□□□□□ -0.37
CCNA1-202ENST00000440264 SS18Q15532 418 aa12.76□□□□□ -0.37
CCNA1-202ENST00000440264 VAMP3Q15836 100 aa12.76□□□□□ -0.37
CCNA1-202ENST00000440264 MIAQ16674 131 aa12.76□□□□□ -0.37
CCNA1-202ENST00000440264 C5orf38Q86SI9 138 aa12.76□□□□□ -0.37
CCNA1-202ENST00000440264 A4D1N5 150 aa12.75□□□□□ -0.37
CCNA1-202ENST00000440264 REG3AQ06141 175 aa12.75□□□□□ -0.37
CCNA1-202ENST00000440264 LINC01561Q8N1V8 128 aa12.75□□□□□ -0.37
CCNA1-202ENST00000440264 COL7A1Q02388 2944 aa12.74□□□□□ -0.37
CCNA1-202ENST00000440264 ANGP03950 147 aaKnown RBP12.74□□□□□ -0.37
CCNA1-202ENST00000440264 XCL1P47992 114 aa12.74□□□□□ -0.37
CCNA1-202ENST00000440264 DEFB121Q5J5C9 76 aa12.74□□□□□ -0.37
CCNA1-202ENST00000440264 MRAPQ8TCY5 172 aa12.74□□□□□ -0.37
CCNA1-202ENST00000440264 COX7B2Q8TF08 81 aa12.74□□□□□ -0.37
CCNA1-202ENST00000440264 KRTAP21-3Q3LHN1 58 aa12.74□□□□□ -0.37
CCNA1-202ENST00000440264 DNHD1Q96M86 4753 aa12.74□□□□□ -0.37
CCNA1-202ENST00000440264 ESRGQ1W209 222 aa12.73□□□□□ -0.37
CCNA1-202ENST00000440264 HERV-K104P63124 156 aa12.72□□□□□ -0.37
CCNA1-202ENST00000440264 CD164L2Q6UWJ8 174 aa12.72□□□□□ -0.37
CCNA1-202ENST00000440264 RPL24P83731 157 aaKnown RBP12.71□□□□□ -0.37
CCNA1-202ENST00000440264 WFDC10BQ8IUB3 73 aa12.71□□□□□ -0.37
CCNA1-202ENST00000440264 CHCHD10Q8WYQ3 142 aaPredicted RBP12.71□□□□□ -0.37
CCNA1-202ENST00000440264 DNAH1Q9P2D7 4330 aa12.71□□□□□ -0.37
CCNA1-202ENST00000440264 ENHOQ6UWT2 76 aa12.71□□□□□ -0.38
CCNA1-202ENST00000440264 DYNC2H1Q8NCM8 4307 aaKnown RBP12.7□□□□□ -0.38
CCNA1-202ENST00000440264 K7EP34 96 aa12.7□□□□□ -0.38
CCNA1-202ENST00000440264 APOMO95445 188 aa12.7□□□□□ -0.38
CCNA1-202ENST00000440264 FOXI1Q12951 378 aa12.7□□□□□ -0.38
CCNA1-202ENST00000440264 STAB2Q8WWQ8 2551 aa12.7□□□□□ -0.38
CCNA1-202ENST00000440264 A0A0B4J2C4 111 aa12.69□□□□□ -0.38
CCNA1-202ENST00000440264 TSPAN13O95857 204 aa12.69□□□□□ -0.38
CCNA1-202ENST00000440264 DAND5Q8N907 189 aa12.69□□□□□ -0.38
CCNA1-202ENST00000440264 IFITM1P13164 125 aa12.69□□□□□ -0.38
CCNA1-202ENST00000440264 SOSTDC1Q6X4U4 206 aa12.69□□□□□ -0.38
CCNA1-202ENST00000440264 PGPEP1Q9NXJ5 209 aa12.69□□□□□ -0.38
CCNA1-202ENST00000440264 TRAV10A0A0B4J240 114 aa12.68□□□□□ -0.38
CCNA1-202ENST00000440264 KIAA0087Q14695 138 aa12.68□□□□□ -0.38
CCNA1-202ENST00000440264 KLK12Q9UKR0 248 aa12.68□□□□□ -0.38
CCNA1-202ENST00000440264 IGLV10-54A0A075B6I4 117 aa12.67□□□□□ -0.38
CCNA1-202ENST00000440264 PRSS2P07478 247 aa12.67□□□□□ -0.38
CCNA1-202ENST00000440264 FABP2P12104 132 aa12.66□□□□□ -0.38
CCNA1-202ENST00000440264 Q8IZM0 81 aa12.66□□□□□ -0.38
CCNA1-202ENST00000440264 LINC00308Q8TCZ7 52 aa12.66□□□□□ -0.38
CCNA1-202ENST00000440264 PPDPFQ9H3Y8 114 aa12.66□□□□□ -0.38
CCNA1-202ENST00000440264 TOMM7Q9P0U1 55 aa12.66□□□□□ -0.38
CCNA1-202ENST00000440264 PRO1854Q9UHT4 67 aa12.66□□□□□ -0.38
CCNA1-202ENST00000440264 GAGE10A6NGK3 116 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms