RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 IGHV4-28A0A0C4DH34 117 aa3.37□□□□□ -1.87
EDEM3-203ENST00000439962 TSPAN13O95857 204 aa3.37□□□□□ -1.87
EDEM3-203ENST00000439962 SFTA2Q6UW10 78 aa3.37□□□□□ -1.87
EDEM3-203ENST00000439962 PGPEP1Q9NXJ5 209 aa3.37□□□□□ -1.87
EDEM3-203ENST00000439962 CELA1Q9UNI1 258 aa3.37□□□□□ -1.87
EDEM3-203ENST00000439962 TRBV30A0A0K0K1B3 111 aa3.37□□□□□ -1.87
EDEM3-203ENST00000439962 GIG44P09565 113 aaPredicted RBP3.37□□□□□ -1.87
EDEM3-203ENST00000439962 HERVK_113P63121 156 aa3.37□□□□□ -1.87
EDEM3-203ENST00000439962 Q6ZTC4 211 aa3.37□□□□□ -1.87
EDEM3-203ENST00000439962 C11orf45Q8TAV5 145 aa3.37□□□□□ -1.87
EDEM3-203ENST00000439962 C16orf74Q96GX8 76 aa3.37□□□□□ -1.87
EDEM3-203ENST00000439962 LINC01587Q99440 93 aa3.37□□□□□ -1.87
EDEM3-203ENST00000439962 K7ERJ3 54 aa3.37□□□□□ -1.87
EDEM3-203ENST00000439962 NDUFA1O15239 70 aa3.37□□□□□ -1.87
EDEM3-203ENST00000439962 VSIG2Q96IQ7 327 aa3.37□□□□□ -1.87
EDEM3-203ENST00000439962 M0R2N4 97 aa3.36□□□□□ -1.87
EDEM3-203ENST00000439962 CFC1BP0CG36 223 aa3.36□□□□□ -1.87
EDEM3-203ENST00000439962 CFC1P0CG37 223 aa3.36□□□□□ -1.87
EDEM3-203ENST00000439962 IGHV3-30-3P0DP02 117 aa3.36□□□□□ -1.87
EDEM3-203ENST00000439962 AZU1P20160 251 aa3.36□□□□□ -1.87
EDEM3-203ENST00000439962 TSPEAR-AS2P59090 65 aa3.36□□□□□ -1.87
EDEM3-203ENST00000439962 HERV-K104P63124 156 aa3.36□□□□□ -1.87
EDEM3-203ENST00000439962 RPL36AP83881 106 aaKnown RBP3.36□□□□□ -1.87
EDEM3-203ENST00000439962 MIAQ16674 131 aa3.36□□□□□ -1.87
EDEM3-203ENST00000439962 RPL36ALQ969Q0 106 aaKnown RBP3.36□□□□□ -1.87
EDEM3-203ENST00000439962 FAM104AQ969W3 186 aa3.36□□□□□ -1.87
EDEM3-203ENST00000439962 TRAV26-1A0A087WT03 109 aa3.36□□□□□ -1.87
EDEM3-203ENST00000439962 IGLV5-39A0A0G2JS06 123 aa3.36□□□□□ -1.87
EDEM3-203ENST00000439962 TRBV6-4A0A1B0GX49 114 aa3.36□□□□□ -1.87
EDEM3-203ENST00000439962 K7EQD1 137 aa3.36□□□□□ -1.87
EDEM3-203ENST00000439962 IGHV3-33P01772 117 aa3.36□□□□□ -1.87
EDEM3-203ENST00000439962 KRTAP3-3Q9BYR6 98 aa3.36□□□□□ -1.87
EDEM3-203ENST00000439962 KRTAP3-2Q9BYR7 98 aa3.36□□□□□ -1.87
EDEM3-203ENST00000439962 TMEM262E9PQX1 116 aa3.35□□□□□ -1.87
EDEM3-203ENST00000439962 CIRBPQ14011 172 aaKnown RBP3.35□□□□□ -1.87
EDEM3-203ENST00000439962 RNF151Q2KHN1 245 aa3.35□□□□□ -1.87
EDEM3-203ENST00000439962 TEN1Q86WV5 123 aa3.35□□□□□ -1.87
EDEM3-203ENST00000439962 LINC01561Q8N1V8 128 aa3.35□□□□□ -1.87
EDEM3-203ENST00000439962 PPDPFLQ8WWR9 84 aa3.35□□□□□ -1.87
EDEM3-203ENST00000439962 LITAFQ99732 161 aa3.35□□□□□ -1.87
EDEM3-203ENST00000439962 ERG28Q9UKR5 140 aa3.35□□□□□ -1.87
EDEM3-203ENST00000439962 A0A096LPF7 62 aa3.35□□□□□ -1.87
EDEM3-203ENST00000439962 A0A0J9YXV3 536 aa3.35□□□□□ -1.87
EDEM3-203ENST00000439962 TEX48A0A1B0GUV7 120 aa3.35□□□□□ -1.87
EDEM3-203ENST00000439962 ATXN8Q156A1 80 aa3.35□□□□□ -1.87
EDEM3-203ENST00000439962 FAM222AQ5U5X8 452 aa3.35□□□□□ -1.87
EDEM3-203ENST00000439962 C1orf158Q8N1D5 194 aa3.35□□□□□ -1.87
EDEM3-203ENST00000439962 GEMIN7Q9H840 131 aaKnown RBP3.35□□□□□ -1.87
EDEM3-203ENST00000439962 SMIM9A6NGZ8 99 aa3.34□□□□□ -1.87
EDEM3-203ENST00000439962 COX6CP09669 75 aa3.34□□□□□ -1.87
EDEM3-203ENST00000439962 FOXI1Q12951 378 aa3.34□□□□□ -1.87
EDEM3-203ENST00000439962 MTURNQ8N3F0 131 aa3.34□□□□□ -1.87
EDEM3-203ENST00000439962 SIGMAR1Q99720 223 aa3.34□□□□□ -1.87
EDEM3-203ENST00000439962 NOP10Q9NPE3 64 aaKnown RBP3.34□□□□□ -1.87
EDEM3-203ENST00000439962 NDUFA12Q9UI09 145 aa3.34□□□□□ -1.87
EDEM3-203ENST00000439962 EPPK1P58107 5090 aaKnown RBP3.34□□□□□ -1.87
EDEM3-203ENST00000439962 A4D1N5 150 aa3.34□□□□□ -1.87
EDEM3-203ENST00000439962 A8MZ25 164 aa3.34□□□□□ -1.87
EDEM3-203ENST00000439962 H3BT86 120 aa3.34□□□□□ -1.87
EDEM3-203ENST00000439962 LINC00694P0DN24 101 aa3.34□□□□□ -1.87
EDEM3-203ENST00000439962 RPL13AP40429 203 aaKnown RBP3.34□□□□□ -1.87
EDEM3-203ENST00000439962 LINC00612Q8N6U2 182 aa3.34□□□□□ -1.87
EDEM3-203ENST00000439962 KIR2DL5BQ8NHK3 375 aa3.34□□□□□ -1.87
EDEM3-203ENST00000439962 X6R8D5 127 aa3.34□□□□□ -1.87
EDEM3-203ENST00000439962 GAGE12HA6NDE8 117 aa3.33□□□□□ -1.88
EDEM3-203ENST00000439962 F5H768 121 aa3.33□□□□□ -1.88
EDEM3-203ENST00000439962 APOMO95445 188 aa3.33□□□□□ -1.88
EDEM3-203ENST00000439962 WFDC2Q14508 124 aa3.33□□□□□ -1.88
EDEM3-203ENST00000439962 MRPL23Q16540 153 aaKnown RBP3.33□□□□□ -1.88
EDEM3-203ENST00000439962 Q8NAQ8 132 aa3.33□□□□□ -1.88
EDEM3-203ENST00000439962 CARD19Q96LW7 228 aa3.33□□□□□ -1.88
EDEM3-203ENST00000439962 NAA38Q9BRA0 125 aaKnown RBP3.33□□□□□ -1.88
EDEM3-203ENST00000439962 DEFB131BA0A096LNP1 70 aa3.33□□□□□ -1.88
EDEM3-203ENST00000439962 C3orf84H3BNL1 204 aa3.33□□□□□ -1.88
EDEM3-203ENST00000439962 GAGE7O76087 117 aa3.33□□□□□ -1.88
EDEM3-203ENST00000439962 GAGE12FP0CL80 117 aa3.33□□□□□ -1.88
EDEM3-203ENST00000439962 GAGE12GP0CL81 117 aa3.33□□□□□ -1.88
EDEM3-203ENST00000439962 GAGE12IP0CL82 117 aa3.33□□□□□ -1.88
EDEM3-203ENST00000439962 DGAT2L7PQ6IED9 249 aa3.33□□□□□ -1.88
EDEM3-203ENST00000439962 MUSTN1Q8IVN3 82 aa3.33□□□□□ -1.88
EDEM3-203ENST00000439962 TMEM101Q96IK0 257 aa3.33□□□□□ -1.88
EDEM3-203ENST00000439962 KLK5Q9Y337 293 aaPredicted RBP3.33□□□□□ -1.88
EDEM3-203ENST00000439962 TCL1BO95988 128 aa3.33□□□□□ -1.88
EDEM3-203ENST00000439962 PSMB2P49721 201 aa3.33□□□□□ -1.88
EDEM3-203ENST00000439962 DAD1P61803 113 aa3.33□□□□□ -1.88
EDEM3-203ENST00000439962 Q6ZSN1 163 aa3.33□□□□□ -1.88
EDEM3-203ENST00000439962 Q6ZUT4 128 aa3.33□□□□□ -1.88
EDEM3-203ENST00000439962 CSNK1G2-AS1Q8NCQ2 148 aa3.33□□□□□ -1.88
EDEM3-203ENST00000439962 TMEM243Q9BU79 118 aa3.33□□□□□ -1.88
EDEM3-203ENST00000439962 IGHV3-73A0A0B4J1V6 119 aa3.32□□□□□ -1.88
EDEM3-203ENST00000439962 LOC107984156A0A0G2JMH3 177 aa3.32□□□□□ -1.88
EDEM3-203ENST00000439962 TRBV10-2A0A0K0K1G8 114 aa3.32□□□□□ -1.88
EDEM3-203ENST00000439962 SMCPP49901 116 aaPredicted RBP3.32□□□□□ -1.88
EDEM3-203ENST00000439962 ARL17AQ8IVW1 177 aa3.32□□□□□ -1.88
EDEM3-203ENST00000439962 CDC42SE2Q9NRR3 84 aa3.32□□□□□ -1.88
EDEM3-203ENST00000439962 RYR2Q92736 4967 aa3.32□□□□□ -1.88
EDEM3-203ENST00000439962 VPS13DQ5THJ4 4388 aa3.32□□□□□ -1.88
EDEM3-203ENST00000439962 TRGV2A0A075B6R0 118 aa3.32□□□□□ -1.88
EDEM3-203ENST00000439962 TRGV1A0A0A0MS02 117 aa3.32□□□□□ -1.88
EDEM3-203ENST00000439962 FAM240AA0A1B0GVK7 77 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms