RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 APOMO95445 188 aa7.64□□□□□ -1.19
HSPG2-206ENST00000439717 SLPIP03973 132 aa7.64□□□□□ -1.19
HSPG2-206ENST00000439717 RAB5BP61020 215 aa7.64□□□□□ -1.19
HSPG2-206ENST00000439717 SCGB3A1Q96QR1 104 aa7.64□□□□□ -1.19
HSPG2-206ENST00000439717 IGHV3-64A0A075B6Q5 118 aa7.63□□□□□ -1.19
HSPG2-206ENST00000439717 ZNF561-AS1K7EIQ3 104 aa7.63□□□□□ -1.19
HSPG2-206ENST00000439717 LINC00614P0C842 121 aa7.63□□□□□ -1.19
HSPG2-206ENST00000439717 UBE2D1P51668 147 aa7.63□□□□□ -1.19
HSPG2-206ENST00000439717 LINC00173Q6ZV60 143 aa7.63□□□□□ -1.19
HSPG2-206ENST00000439717 C5orf38Q86SI9 138 aa7.63□□□□□ -1.19
HSPG2-206ENST00000439717 LINC00242Q5T6M2 205 aa7.62□□□□□ -1.19
HSPG2-206ENST00000439717 SDIM1Q6ZPB5 146 aa7.62□□□□□ -1.19
HSPG2-206ENST00000439717 FAM19A3Q7Z5A8 133 aa7.62□□□□□ -1.19
HSPG2-206ENST00000439717 Q8N1X5 172 aa7.62□□□□□ -1.19
HSPG2-206ENST00000439717 SEC11AP67812 179 aa7.61□□□□□ -1.19
HSPG2-206ENST00000439717 ZC2HC1BQ5TFG8 222 aa7.61□□□□□ -1.19
HSPG2-206ENST00000439717 OR10D4PQ8NGN7 298 aa7.61□□□□□ -1.19
HSPG2-206ENST00000439717 URB1-AS1Q96HZ7 61 aa7.61□□□□□ -1.19
HSPG2-206ENST00000439717 A0A087WZ39 114 aa7.6□□□□□ -1.19
HSPG2-206ENST00000439717 COLCA2A8K830 154 aa7.6□□□□□ -1.19
HSPG2-206ENST00000439717 COX6A2Q02221 97 aa7.6□□□□□ -1.19
HSPG2-206ENST00000439717 LINC01561Q8N1V8 128 aa7.6□□□□□ -1.19
HSPG2-206ENST00000439717 C2orf48Q96LS8 159 aa7.6□□□□□ -1.19
HSPG2-206ENST00000439717 CHAC1Q9BUX1 264 aa7.6□□□□□ -1.19
HSPG2-206ENST00000439717 PKIGQ9Y2B9 76 aa7.6□□□□□ -1.19
HSPG2-206ENST00000439717 IGLV4-69A0A075B6H9 119 aa7.59□□□□□ -1.19
HSPG2-206ENST00000439717 F8WDY8 70 aa7.59□□□□□ -1.19
HSPG2-206ENST00000439717 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.59□□□□□ -1.19
HSPG2-206ENST00000439717 HBDP02042 147 aa7.59□□□□□ -1.19
HSPG2-206ENST00000439717 TRGC2P03986 189 aa7.59□□□□□ -1.19
HSPG2-206ENST00000439717 HERVK_113P63121 156 aa7.59□□□□□ -1.19
HSPG2-206ENST00000439717 SPAG11BQ08648 103 aa7.59□□□□□ -1.19
HSPG2-206ENST00000439717 SYCNQ0VAF6 134 aa7.59□□□□□ -1.19
HSPG2-206ENST00000439717 SCXQ7RTU7 201 aa7.59□□□□□ -1.19
HSPG2-206ENST00000439717 CHCHD1Q96BP2 118 aaKnown RBP7.59□□□□□ -1.19
HSPG2-206ENST00000439717 LINC00526Q96FQ7 95 aa7.59□□□□□ -1.19
HSPG2-206ENST00000439717 CARD19Q96LW7 228 aa7.59□□□□□ -1.19
HSPG2-206ENST00000439717 A0A096LNJ9 63 aa7.58□□□□□ -1.2
HSPG2-206ENST00000439717 HAMPP81172 84 aa7.58□□□□□ -1.2
HSPG2-206ENST00000439717 PMVKQ15126 192 aa7.58□□□□□ -1.2
HSPG2-206ENST00000439717 ORAOV1Q8WV07 137 aa7.58□□□□□ -1.2
HSPG2-206ENST00000439717 KRTAP17-1Q9BYP8 105 aa7.58□□□□□ -1.2
HSPG2-206ENST00000439717 CST9LQ9H4G1 147 aa7.58□□□□□ -1.2
HSPG2-206ENST00000439717 CIRBPQ14011 172 aaKnown RBP7.57□□□□□ -1.2
HSPG2-206ENST00000439717 PDZD11Q5EBL8 140 aa7.57□□□□□ -1.2
HSPG2-206ENST00000439717 CIRBP-AS1Q8TBR5 109 aa7.57□□□□□ -1.2
HSPG2-206ENST00000439717 CAMK2N2Q96S95 79 aa7.57□□□□□ -1.2
HSPG2-206ENST00000439717 GEMIN7Q9H840 131 aaKnown RBP7.57□□□□□ -1.2
HSPG2-206ENST00000439717 TINCRA0A1B0GVN0 87 aa7.56□□□□□ -1.2
HSPG2-206ENST00000439717 EPM2AB3EWF7 344 aa7.56□□□□□ -1.2
HSPG2-206ENST00000439717 ATP5LO75964 103 aa7.56□□□□□ -1.2
HSPG2-206ENST00000439717 SMR3BP02814 79 aaPredicted RBP7.56□□□□□ -1.2
HSPG2-206ENST00000439717 PMCHL1Q16048 86 aa7.56□□□□□ -1.2
HSPG2-206ENST00000439717 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.56□□□□□ -1.2
HSPG2-206ENST00000439717 A0A0J9YXV3 536 aa7.55□□□□□ -1.2
HSPG2-206ENST00000439717 FAM229AH3BQW9 127 aa7.55□□□□□ -1.2
HSPG2-206ENST00000439717 RNF151Q2KHN1 245 aa7.55□□□□□ -1.2
HSPG2-206ENST00000439717 Q6ZRU5 148 aa7.55□□□□□ -1.2
HSPG2-206ENST00000439717 BAGE3Q86Y29 109 aa7.55□□□□□ -1.2
HSPG2-206ENST00000439717 VPS13BQ7Z7G8 4022 aa7.54□□□□□ -1.2
HSPG2-206ENST00000439717 IGLV5-45A0A087WSX0 123 aa7.54□□□□□ -1.2
HSPG2-206ENST00000439717 PANO1I0J062 215 aa7.54□□□□□ -1.2
HSPG2-206ENST00000439717 NDUFA1O15239 70 aa7.54□□□□□ -1.2
HSPG2-206ENST00000439717 SCO1O75880 301 aa7.54□□□□□ -1.2
HSPG2-206ENST00000439717 KIAA0087Q14695 138 aa7.54□□□□□ -1.2
HSPG2-206ENST00000439717 Q5VSD8 79 aa7.54□□□□□ -1.2
HSPG2-206ENST00000439717 SPACA4Q8TDM5 124 aa7.54□□□□□ -1.2
HSPG2-206ENST00000439717 KRTAP4-5Q9BYR2 181 aa7.54□□□□□ -1.2
HSPG2-206ENST00000439717 MRPL35Q9NZE8 188 aaKnown RBP7.54□□□□□ -1.2
HSPG2-206ENST00000439717 LINC00474Q9P2X8 69 aa7.54□□□□□ -1.2
HSPG2-206ENST00000439717 CDKN2A-AS1Q9UH64 79 aa7.54□□□□□ -1.2
HSPG2-206ENST00000439717 LOC107984640A0A0U1RRK4 108 aa7.53□□□□□ -1.2
HSPG2-206ENST00000439717 HSBP1O75506 76 aa7.53□□□□□ -1.2
HSPG2-206ENST00000439717 CHTF8P0CG12 524 aa7.53□□□□□ -1.2
HSPG2-206ENST00000439717 LINC00469Q8N7U9 141 aa7.53□□□□□ -1.2
HSPG2-206ENST00000439717 DPH3Q96FX2 82 aa7.53□□□□□ -1.2
HSPG2-206ENST00000439717 PACRGQ96M98 296 aaPredicted RBP7.53□□□□□ -1.2
HSPG2-206ENST00000439717 A0A096LNI7 61 aa7.52□□□□□ -1.21
HSPG2-206ENST00000439717 PRSS2P07478 247 aa7.52□□□□□ -1.21
HSPG2-206ENST00000439717 NDUFA6P56556 154 aa7.52□□□□□ -1.21
HSPG2-206ENST00000439717 Q8IZM0 81 aa7.52□□□□□ -1.21
HSPG2-206ENST00000439717 LINC00528Q8N1L1 170 aa7.52□□□□□ -1.21
HSPG2-206ENST00000439717 A0A087WYN8 130 aa7.51□□□□□ -1.21
HSPG2-206ENST00000439717 IGKV2-24A0A0C4DH68 120 aa7.51□□□□□ -1.21
HSPG2-206ENST00000439717 IGLC3P0DOY3 106 aa7.51□□□□□ -1.21
HSPG2-206ENST00000439717 MAJINQ3KP22 176 aa7.51□□□□□ -1.21
HSPG2-206ENST00000439717 C6orf226Q5I0X4 101 aa7.51□□□□□ -1.21
HSPG2-206ENST00000439717 UNQ6190/PRO20217Q6UXQ8 127 aa7.51□□□□□ -1.21
HSPG2-206ENST00000439717 PLAC8Q9NZF1 115 aa7.51□□□□□ -1.21
HSPG2-206ENST00000439717 TRBV30A0A0K0K1B3 111 aa7.5□□□□□ -1.21
HSPG2-206ENST00000439717 H3BRM9 83 aa7.5□□□□□ -1.21
HSPG2-206ENST00000439717 PLA2G1BP04054 148 aaKnown RBP7.5□□□□□ -1.21
HSPG2-206ENST00000439717 PTTG1IPP53801 180 aa7.5□□□□□ -1.21
HSPG2-206ENST00000439717 C10orf25Q5T742 122 aa7.5□□□□□ -1.21
HSPG2-206ENST00000439717 IFI27L1Q96BM0 104 aa7.5□□□□□ -1.21
HSPG2-206ENST00000439717 TOMM7Q9P0U1 55 aa7.5□□□□□ -1.21
HSPG2-206ENST00000439717 TRAV12-1A0A0B4J245 112 aa7.49□□□□□ -1.21
HSPG2-206ENST00000439717 SMIM1B2RUZ4 78 aa7.49□□□□□ -1.21
HSPG2-206ENST00000439717 SERF1AO75920 110 aa7.49□□□□□ -1.21
HSPG2-206ENST00000439717 TLX1NBP0CAT3 122 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms