RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 IGLV4-69A0A075B6H9 119 aa6.7□□□□□ -1.34
MCF2L-216ENST00000439475 TGIF2-C20orf24A0A0A6YYL0 155 aa6.7□□□□□ -1.34
MCF2L-216ENST00000439475 LINC01549A6NIU2 74 aa6.7□□□□□ -1.34
MCF2L-216ENST00000439475 SNAPINO95295 136 aa6.7□□□□□ -1.34
MCF2L-216ENST00000439475 CIRBPQ14011 172 aaKnown RBP6.7□□□□□ -1.34
MCF2L-216ENST00000439475 CAMK2N2Q96S95 79 aa6.7□□□□□ -1.34
MCF2L-216ENST00000439475 OPRPNQ99935 248 aaPredicted RBP6.7□□□□□ -1.34
MCF2L-216ENST00000439475 VCX2Q9H322 139 aa6.7□□□□□ -1.34
MCF2L-216ENST00000439475 LINC00474Q9P2X8 69 aa6.7□□□□□ -1.34
MCF2L-216ENST00000439475 FAT1Q14517 4588 aa6.69□□□□□ -1.34
MCF2L-216ENST00000439475 IGLV4-3A0A075B6K6 122 aa6.69□□□□□ -1.34
MCF2L-216ENST00000439475 F8WDY8 70 aa6.69□□□□□ -1.34
MCF2L-216ENST00000439475 APOC3P02656 99 aa6.69□□□□□ -1.34
MCF2L-216ENST00000439475 FABP9Q0Z7S8 132 aa6.69□□□□□ -1.34
MCF2L-216ENST00000439475 SVBPQ8N300 66 aa6.69□□□□□ -1.34
MCF2L-216ENST00000439475 OR10D4PQ8NGN7 298 aa6.69□□□□□ -1.34
MCF2L-216ENST00000439475 LINC00526Q96FQ7 95 aa6.69□□□□□ -1.34
MCF2L-216ENST00000439475 C2orf48Q96LS8 159 aa6.69□□□□□ -1.34
MCF2L-216ENST00000439475 A0A087WYN8 130 aa6.68□□□□□ -1.34
MCF2L-216ENST00000439475 IGHV3OR16-9A0A0B4J2B5 98 aa6.68□□□□□ -1.34
MCF2L-216ENST00000439475 IGKV2-24A0A0C4DH68 120 aa6.68□□□□□ -1.34
MCF2L-216ENST00000439475 RPL37AP61513 92 aaKnown RBP6.68□□□□□ -1.34
MCF2L-216ENST00000439475 SEC11AP67812 179 aa6.68□□□□□ -1.34
MCF2L-216ENST00000439475 SPAG11BQ08648 103 aa6.68□□□□□ -1.34
MCF2L-216ENST00000439475 MAJINQ3KP22 176 aa6.68□□□□□ -1.34
MCF2L-216ENST00000439475 SPACA4Q8TDM5 124 aa6.68□□□□□ -1.34
MCF2L-216ENST00000439475 MRPL18Q9H0U6 180 aaKnown RBP6.68□□□□□ -1.34
MCF2L-216ENST00000439475 SMCO4Q9NRQ5 59 aa6.68□□□□□ -1.34
MCF2L-216ENST00000439475 LOC107984640A0A0U1RRK4 108 aa6.67□□□□□ -1.34
MCF2L-216ENST00000439475 PANO1I0J062 215 aa6.67□□□□□ -1.34
MCF2L-216ENST00000439475 CHTF8P0CG12 524 aa6.67□□□□□ -1.34
MCF2L-216ENST00000439475 ORAOV1Q8WV07 137 aa6.67□□□□□ -1.34
MCF2L-216ENST00000439475 FAM104AQ969W3 186 aa6.67□□□□□ -1.34
MCF2L-216ENST00000439475 ALKBH7Q9BT30 221 aaPredicted RBP6.67□□□□□ -1.34
MCF2L-216ENST00000439475 RNF151Q2KHN1 245 aa6.66□□□□□ -1.34
MCF2L-216ENST00000439475 LINC00242Q5T6M2 205 aa6.66□□□□□ -1.34
MCF2L-216ENST00000439475 Q6ZRU5 148 aa6.66□□□□□ -1.34
MCF2L-216ENST00000439475 FA2HQ7L5A8 372 aa6.66□□□□□ -1.34
MCF2L-216ENST00000439475 LINC01561Q8N1V8 128 aa6.66□□□□□ -1.34
MCF2L-216ENST00000439475 STPG4Q8N801 248 aa6.66□□□□□ -1.34
MCF2L-216ENST00000439475 C7orf33Q8WU49 177 aa6.66□□□□□ -1.34
MCF2L-216ENST00000439475 TOMM6Q96B49 74 aa6.66□□□□□ -1.34
MCF2L-216ENST00000439475 AMELXQ99217 191 aa6.66□□□□□ -1.34
MCF2L-216ENST00000439475 TIMM17AQ99595 171 aa6.66□□□□□ -1.34
MCF2L-216ENST00000439475 PLAC8Q9NZF1 115 aa6.66□□□□□ -1.34
MCF2L-216ENST00000439475 TRAPPC1Q9Y5R8 145 aa6.66□□□□□ -1.34
MCF2L-216ENST00000439475 A0A087WZ39 114 aa6.65□□□□□ -1.34
MCF2L-216ENST00000439475 IGIPA6NJ69 53 aa6.65□□□□□ -1.34
MCF2L-216ENST00000439475 NDUFA1O15239 70 aa6.65□□□□□ -1.34
MCF2L-216ENST00000439475 UBE2D1P51668 147 aa6.65□□□□□ -1.34
MCF2L-216ENST00000439475 GAGE2BQ13066 116 aa6.65□□□□□ -1.34
MCF2L-216ENST00000439475 ERASQ7Z444 233 aa6.65□□□□□ -1.34
MCF2L-216ENST00000439475 SCGB3A1Q96QR1 104 aa6.65□□□□□ -1.34
MCF2L-216ENST00000439475 A0A096LNI7 61 aa6.64□□□□□ -1.35
MCF2L-216ENST00000439475 HERVK_113P63121 156 aa6.64□□□□□ -1.35
MCF2L-216ENST00000439475 GEMIN7Q9H840 131 aaKnown RBP6.64□□□□□ -1.35
MCF2L-216ENST00000439475 MRPL35Q9NZE8 188 aaKnown RBP6.64□□□□□ -1.35
MCF2L-216ENST00000439475 J3QL48 77 aa6.63□□□□□ -1.35
MCF2L-216ENST00000439475 PRSS2P07478 247 aa6.63□□□□□ -1.35
MCF2L-216ENST00000439475 RAB5BP61020 215 aa6.63□□□□□ -1.35
MCF2L-216ENST00000439475 PACRGQ96M98 296 aaPredicted RBP6.63□□□□□ -1.35
MCF2L-216ENST00000439475 LINC01546A6NGU7 62 aa6.62□□□□□ -1.35
MCF2L-216ENST00000439475 PTTG1IPP53801 180 aa6.62□□□□□ -1.35
MCF2L-216ENST00000439475 ZC2HC1BQ5TFG8 222 aa6.62□□□□□ -1.35
MCF2L-216ENST00000439475 FAM19A3Q7Z5A8 133 aa6.62□□□□□ -1.35
MCF2L-216ENST00000439475 LINC00614P0C842 121 aa6.61□□□□□ -1.35
MCF2L-216ENST00000439475 RPL18AQ02543 176 aaKnown RBP6.61□□□□□ -1.35
MCF2L-216ENST00000439475 LINC00173Q6ZV60 143 aa6.61□□□□□ -1.35
MCF2L-216ENST00000439475 ABCA13Q86UQ4 5058 aa6.61□□□□□ -1.35
MCF2L-216ENST00000439475 PCLOQ9Y6V0 5065 aa6.6□□□□□ -1.35
MCF2L-216ENST00000439475 TRBV30A0A0K0K1B3 111 aa6.6□□□□□ -1.35
MCF2L-216ENST00000439475 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.6□□□□□ -1.35
MCF2L-216ENST00000439475 KRTAP10-4P60372 401 aaPredicted RBP6.6□□□□□ -1.35
MCF2L-216ENST00000439475 CKS1BP61024 79 aa6.6□□□□□ -1.35
MCF2L-216ENST00000439475 C6orf226Q5I0X4 101 aa6.6□□□□□ -1.35
MCF2L-216ENST00000439475 UNQ6190/PRO20217Q6UXQ8 127 aa6.6□□□□□ -1.35
MCF2L-216ENST00000439475 TOMM7Q9P0U1 55 aa6.6□□□□□ -1.35
MCF2L-216ENST00000439475 A0A0J9YXV3 536 aa6.59□□□□□ -1.35
MCF2L-216ENST00000439475 TINCRA0A1B0GVN0 87 aa6.59□□□□□ -1.35
MCF2L-216ENST00000439475 KRTAP29-1A8MX34 341 aaPredicted RBP6.59□□□□□ -1.35
MCF2L-216ENST00000439475 OXTP01178 125 aa6.59□□□□□ -1.35
MCF2L-216ENST00000439475 TLX1NBP0CAT3 122 aa6.59□□□□□ -1.35
MCF2L-216ENST00000439475 KIAA0087Q14695 138 aa6.59□□□□□ -1.35
MCF2L-216ENST00000439475 PMVKQ15126 192 aa6.59□□□□□ -1.35
MCF2L-216ENST00000439475 C18orf32Q8TCD1 76 aa6.59□□□□□ -1.35
MCF2L-216ENST00000439475 C9orf116Q5BN46 136 aaPredicted RBP6.58□□□□□ -1.36
MCF2L-216ENST00000439475 Q8IZM0 81 aa6.58□□□□□ -1.36
MCF2L-216ENST00000439475 LINC00469Q8N7U9 141 aa6.58□□□□□ -1.36
MCF2L-216ENST00000439475 C6orf48Q9UBA6 75 aa6.58□□□□□ -1.36
MCF2L-216ENST00000439475 CDKN2A-AS1Q9UH64 79 aa6.58□□□□□ -1.36
MCF2L-216ENST00000439475 ATP5LO75964 103 aa6.57□□□□□ -1.36
MCF2L-216ENST00000439475 HBDP02042 147 aa6.57□□□□□ -1.36
MCF2L-216ENST00000439475 CXCL5P42830 114 aa6.57□□□□□ -1.36
MCF2L-216ENST00000439475 NDUFA6P56556 154 aa6.57□□□□□ -1.36
MCF2L-216ENST00000439475 C10orf25Q5T742 122 aa6.57□□□□□ -1.36
MCF2L-216ENST00000439475 Q6ZRP5 223 aa6.57□□□□□ -1.36
MCF2L-216ENST00000439475 CST9LQ9H4G1 147 aa6.57□□□□□ -1.36
MCF2L-216ENST00000439475 VPS13BQ7Z7G8 4022 aa6.56□□□□□ -1.36
MCF2L-216ENST00000439475 FLG2Q5D862 2391 aaPredicted RBP6.56□□□□□ -1.36
MCF2L-216ENST00000439475 A0A1W2PNN7 141 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms