RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 PROK1P58294 105 aa6.2□□□□□ -1.42
HPS4-206ENST00000439453 DNAJC30Q96LL9 226 aa6.2□□□□□ -1.42
HPS4-206ENST00000439453 A6NDX4 124 aa6.2□□□□□ -1.42
HPS4-206ENST00000439453 H3BUX3 64 aa6.2□□□□□ -1.42
HPS4-206ENST00000439453 K7EMT4 169 aa6.2□□□□□ -1.42
HPS4-206ENST00000439453 IGHG2P01859 326 aa6.2□□□□□ -1.42
HPS4-206ENST00000439453 LY6EQ16553 131 aa6.2□□□□□ -1.42
HPS4-206ENST00000439453 NDUFA1O15239 70 aa6.2□□□□□ -1.42
HPS4-206ENST00000439453 TRACP01848 142 aa6.2□□□□□ -1.42
HPS4-206ENST00000439453 KRTAP10-3P60369 221 aa6.2□□□□□ -1.42
HPS4-206ENST00000439453 UBE2D4Q9Y2X8 147 aa6.2□□□□□ -1.42
HPS4-206ENST00000439453 J3KT08 172 aa6.19□□□□□ -1.42
HPS4-206ENST00000439453 LINC00308Q8TCZ7 52 aa6.19□□□□□ -1.42
HPS4-206ENST00000439453 LINC00526Q96FQ7 95 aa6.19□□□□□ -1.42
HPS4-206ENST00000439453 CHCHD7Q9BUK0 85 aa6.19□□□□□ -1.42
HPS4-206ENST00000439453 IGKV3OR2-268A0A0C4DH90 116 aa6.19□□□□□ -1.42
HPS4-206ENST00000439453 DAZ2Q13117 558 aaKnown RBP6.19□□□□□ -1.42
HPS4-206ENST00000439453 DAZ4Q86SG3 579 aaKnown RBP6.19□□□□□ -1.42
HPS4-206ENST00000439453 DAZ3Q9NR90 486 aaKnown RBP6.19□□□□□ -1.42
HPS4-206ENST00000439453 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.19□□□□□ -1.42
HPS4-206ENST00000439453 IGKV2-29A2NJV5 120 aaPredicted RBP6.19□□□□□ -1.42
HPS4-206ENST00000439453 ATP5G1P05496 136 aa6.19□□□□□ -1.42
HPS4-206ENST00000439453 HERVK_113P63121 156 aa6.19□□□□□ -1.42
HPS4-206ENST00000439453 KHDC1LQ5JSQ8 128 aa6.19□□□□□ -1.42
HPS4-206ENST00000439453 SDIM1Q6ZPB5 146 aa6.19□□□□□ -1.42
HPS4-206ENST00000439453 CDKN2A-AS1Q9UH64 79 aa6.19□□□□□ -1.42
HPS4-206ENST00000439453 SNRPD3P62318 126 aaKnown RBP6.18□□□□□ -1.42
HPS4-206ENST00000439453 TOMM7Q9P0U1 55 aa6.18□□□□□ -1.42
HPS4-206ENST00000439453 TRAV13-1A0A0B4J241 112 aa6.18□□□□□ -1.42
HPS4-206ENST00000439453 BAALC-AS2P0C853 105 aa6.18□□□□□ -1.42
HPS4-206ENST00000439453 C5orf38Q86SI9 138 aa6.18□□□□□ -1.42
HPS4-206ENST00000439453 PEMTQ9UBM1 199 aa6.18□□□□□ -1.42
HPS4-206ENST00000439453 Q9UF83 564 aa6.18□□□□□ -1.42
HPS4-206ENST00000439453 IGLV1-40P01703 118 aa6.18□□□□□ -1.42
HPS4-206ENST00000439453 CXCL5P42830 114 aa6.18□□□□□ -1.42
HPS4-206ENST00000439453 BLCAPP62952 87 aa6.18□□□□□ -1.42
HPS4-206ENST00000439453 Q8N2B8 174 aa6.18□□□□□ -1.42
HPS4-206ENST00000439453 LINC00467Q9BRT7 94 aa6.18□□□□□ -1.42
HPS4-206ENST00000439453 C16orf95Q9H693 158 aa6.18□□□□□ -1.42
HPS4-206ENST00000439453 ZNF702PQ9H963 129 aa6.18□□□□□ -1.42
HPS4-206ENST00000439453 BEAN1Q3B7T3 259 aa6.17□□□□□ -1.42
HPS4-206ENST00000439453 SPATA3Q8NHX4 192 aa6.17□□□□□ -1.42
HPS4-206ENST00000439453 Q9H8V8 135 aa6.17□□□□□ -1.42
HPS4-206ENST00000439453 KLK5Q9Y337 293 aaPredicted RBP6.17□□□□□ -1.42
HPS4-206ENST00000439453 CSDC2Q9Y534 153 aaKnown RBP6.17□□□□□ -1.42
HPS4-206ENST00000439453 LOC107984640A0A0U1RRK4 108 aa6.17□□□□□ -1.42
HPS4-206ENST00000439453 KNCNA6PVL3 124 aa6.17□□□□□ -1.42
HPS4-206ENST00000439453 K7EQG2 157 aa6.17□□□□□ -1.42
HPS4-206ENST00000439453 TIRAPP58753 221 aa6.17□□□□□ -1.42
HPS4-206ENST00000439453 IGLV5-45A0A087WSX0 123 aa6.17□□□□□ -1.42
HPS4-206ENST00000439453 INAFM2P0DMQ5 153 aa6.17□□□□□ -1.42
HPS4-206ENST00000439453 C22orf24Q9Y442 160 aa6.17□□□□□ -1.42
HPS4-206ENST00000439453 COX7CP15954 63 aa6.16□□□□□ -1.42
HPS4-206ENST00000439453 SOSTDC1Q6X4U4 206 aa6.16□□□□□ -1.42
HPS4-206ENST00000439453 Q6ZSN1 163 aa6.16□□□□□ -1.42
HPS4-206ENST00000439453 LINC01006Q8NI28 216 aa6.16□□□□□ -1.42
HPS4-206ENST00000439453 C5orf47Q569G3 176 aa6.16□□□□□ -1.42
HPS4-206ENST00000439453 RBMY1A1P0DJD3 496 aaKnown RBP6.16□□□□□ -1.42
HPS4-206ENST00000439453 RBMY1CP0DJD4 496 aa6.16□□□□□ -1.42
HPS4-206ENST00000439453 COX6A2Q02221 97 aa6.16□□□□□ -1.42
HPS4-206ENST00000439453 RBMY1FQ15415 496 aaKnown RBP6.16□□□□□ -1.42
HPS4-206ENST00000439453 IGHV3-38A0A0C4DH36 116 aa6.15□□□□□ -1.42
HPS4-206ENST00000439453 IGHV3OR16-12A0A075B7B8 117 aa6.15□□□□□ -1.43
HPS4-206ENST00000439453 IGLV5-39A0A0G2JS06 123 aa6.15□□□□□ -1.43
HPS4-206ENST00000439453 C2orf48Q96LS8 159 aa6.15□□□□□ -1.43
HPS4-206ENST00000439453 FAM218AQ96MZ4 157 aa6.15□□□□□ -1.43
HPS4-206ENST00000439453 FAM222AQ5U5X8 452 aa6.15□□□□□ -1.43
HPS4-206ENST00000439453 RNF152Q8N8N0 203 aa6.15□□□□□ -1.43
HPS4-206ENST00000439453 A0A1B0GX51 115 aa6.14□□□□□ -1.43
HPS4-206ENST00000439453 CFHR3Q02985 330 aa6.14□□□□□ -1.43
HPS4-206ENST00000439453 CRPP02741 224 aa6.14□□□□□ -1.43
HPS4-206ENST00000439453 HIST2H2BDQ6DRA6 164 aa6.14□□□□□ -1.43
HPS4-206ENST00000439453 CRYGAP11844 174 aa6.14□□□□□ -1.43
HPS4-206ENST00000439453 IGKV3D-7A0A0C4DH55 119 aa6.13□□□□□ -1.43
HPS4-206ENST00000439453 PRM2P04554 102 aa6.13□□□□□ -1.43
HPS4-206ENST00000439453 ATOX1O00244 68 aa6.13□□□□□ -1.43
HPS4-206ENST00000439453 UBE2L6O14933 153 aa6.13□□□□□ -1.43
HPS4-206ENST00000439453 SYNJ2BPP57105 145 aa6.13□□□□□ -1.43
HPS4-206ENST00000439453 LINC00242Q5T6M2 205 aa6.13□□□□□ -1.43
HPS4-206ENST00000439453 FAM19A5Q7Z5A7 132 aaPredicted RBP6.13□□□□□ -1.43
HPS4-206ENST00000439453 MALP21145 153 aa6.12□□□□□ -1.43
HPS4-206ENST00000439453 Q9HAA7 133 aa6.12□□□□□ -1.43
HPS4-206ENST00000439453 SMIM1B2RUZ4 78 aa6.12□□□□□ -1.43
HPS4-206ENST00000439453 C1orf43Q9BWL3 253 aa6.12□□□□□ -1.43
HPS4-206ENST00000439453 hADV29S1A0JD25 119 aa6.12□□□□□ -1.43
HPS4-206ENST00000439453 HOXD3P31249 432 aaPredicted RBP6.12□□□□□ -1.43
HPS4-206ENST00000439453 LINC00158P58513 81 aa6.12□□□□□ -1.43
HPS4-206ENST00000439453 PRKDCP78527 4128 aaKnown RBP6.11□□□□□ -1.43
HPS4-206ENST00000439453 SMIM9A6NGZ8 99 aa6.11□□□□□ -1.43
HPS4-206ENST00000439453 PSMB8P28062 276 aa6.11□□□□□ -1.43
HPS4-206ENST00000439453 C10orf99Q6UWK7 81 aa6.11□□□□□ -1.43
HPS4-206ENST00000439453 IGHV3-53P01767 116 aa6.11□□□□□ -1.43
HPS4-206ENST00000439453 RPS28P62857 69 aaKnown RBP6.11□□□□□ -1.43
HPS4-206ENST00000439453 PIK3CD-AS1Q5SR53 167 aa6.11□□□□□ -1.43
HPS4-206ENST00000439453 ZNF415Q09FC8 603 aa6.11□□□□□ -1.43
HPS4-206ENST00000439453 PAX4O43316 350 aa6.1□□□□□ -1.43
HPS4-206ENST00000439453 RBMY1BA6NDE4 496 aaKnown RBP6.1□□□□□ -1.43
HPS4-206ENST00000439453 RBMY1EA6NEQ0 496 aaKnown RBP6.1□□□□□ -1.43
HPS4-206ENST00000439453 RBMY1DP0C7P1 496 aaKnown RBP6.1□□□□□ -1.43
HPS4-206ENST00000439453 RPL28P46779 137 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms