RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 TRAV10A0A0B4J240 114 aa1.76□□□□□ -2.13
LSM1P1-201ENST00000438629 ODF3BA8MYP8 253 aa1.76□□□□□ -2.13
LSM1P1-201ENST00000438629 PRH1P02810 166 aa1.76□□□□□ -2.13
LSM1P1-201ENST00000438629 CTSGP08311 255 aa1.76□□□□□ -2.13
LSM1P1-201ENST00000438629 UBE2D1P51668 147 aa1.76□□□□□ -2.13
LSM1P1-201ENST00000438629 SSBP1Q04837 148 aaKnown RBP1.76□□□□□ -2.13
LSM1P1-201ENST00000438629 C2orf82Q6UX34 121 aa1.76□□□□□ -2.13
LSM1P1-201ENST00000438629 CDC42SE2Q9NRR3 84 aa1.76□□□□□ -2.13
LSM1P1-201ENST00000438629 TMEM14BQ9NUH8 114 aa1.76□□□□□ -2.13
LSM1P1-201ENST00000438629 C22orf24Q9Y442 160 aa1.76□□□□□ -2.13
LSM1P1-201ENST00000438629 BCORQ6W2J9 1755 aa1.76□□□□□ -2.13
LSM1P1-201ENST00000438629 COL4A1P02462 1669 aa1.76□□□□□ -2.13
LSM1P1-201ENST00000438629 DDX60LQ5H9U9 1706 aaKnown RBP1.75□□□□□ -2.13
LSM1P1-201ENST00000438629 ZNF831Q5JPB2 1677 aa1.75□□□□□ -2.13
LSM1P1-201ENST00000438629 LOC101927531A0A1B0GV80 90 aa1.75□□□□□ -2.13
LSM1P1-201ENST00000438629 A0A1W2PNM2 257 aa1.75□□□□□ -2.13
LSM1P1-201ENST00000438629 C10orf142B7Z368 130 aa1.75□□□□□ -2.13
LSM1P1-201ENST00000438629 LEPROTL1O95214 131 aa1.75□□□□□ -2.13
LSM1P1-201ENST00000438629 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.75□□□□□ -2.13
LSM1P1-201ENST00000438629 CMC2Q9NRP2 79 aa1.75□□□□□ -2.13
LSM1P1-201ENST00000438629 NDUFA4L2Q9NRX3 87 aa1.75□□□□□ -2.13
LSM1P1-201ENST00000438629 LINC01549A6NIU2 74 aa1.74□□□□□ -2.13
LSM1P1-201ENST00000438629 IGHV3-33P01772 117 aa1.74□□□□□ -2.13
LSM1P1-201ENST00000438629 ARMS2P0C7Q2 107 aa1.74□□□□□ -2.13
LSM1P1-201ENST00000438629 S100A3P33764 101 aa1.74□□□□□ -2.13
LSM1P1-201ENST00000438629 ZNF833PQ6ZTB9 187 aa1.74□□□□□ -2.13
LSM1P1-201ENST00000438629 Q6ZTI0 123 aa1.74□□□□□ -2.13
LSM1P1-201ENST00000438629 NINQ8N4C6 2090 aa1.74□□□□□ -2.13
LSM1P1-201ENST00000438629 MYOFQ9NZM1 2061 aa1.74□□□□□ -2.13
LSM1P1-201ENST00000438629 NRAPQ86VF7 1730 aa1.74□□□□□ -2.13
LSM1P1-201ENST00000438629 DOT1LQ8TEK3 1739 aa1.74□□□□□ -2.13
LSM1P1-201ENST00000438629 E9PCH4 1651 aa1.74□□□□□ -2.13
LSM1P1-201ENST00000438629 MALRD1Q5VYJ5 2156 aa1.74□□□□□ -2.13
LSM1P1-201ENST00000438629 SAMD9LQ8IVG5 1584 aa1.73□□□□□ -2.13
LSM1P1-201ENST00000438629 TRBV6-8A0A0A6YYG3 113 aa1.73□□□□□ -2.13
LSM1P1-201ENST00000438629 TRBV7-4A0A0J9YYF1 115 aa1.73□□□□□ -2.13
LSM1P1-201ENST00000438629 TRBV10-1A0A0K0K1A3 114 aa1.73□□□□□ -2.13
LSM1P1-201ENST00000438629 HMGN4O00479 90 aa1.73□□□□□ -2.13
LSM1P1-201ENST00000438629 PPYP01298 95 aa1.73□□□□□ -2.13
LSM1P1-201ENST00000438629 SAA2P0DJI9 122 aaPredicted RBP1.73□□□□□ -2.13
LSM1P1-201ENST00000438629 GDF5OSQ5U4N7 250 aa1.73□□□□□ -2.13
LSM1P1-201ENST00000438629 CSAG1Q6PB30 78 aa1.73□□□□□ -2.13
LSM1P1-201ENST00000438629 KRTAP26-1Q6PEX3 210 aa1.73□□□□□ -2.13
LSM1P1-201ENST00000438629 C4orf3Q8WVX3 66 aa1.73□□□□□ -2.13
LSM1P1-201ENST00000438629 NRXN2Q9P2S2 1712 aa1.73□□□□□ -2.13
LSM1P1-201ENST00000438629 SLIT1O75093 1534 aa1.72□□□□□ -2.13
LSM1P1-201ENST00000438629 A0A087WVE0 104 aa1.72□□□□□ -2.13
LSM1P1-201ENST00000438629 TRAV12-1A0A0B4J245 112 aa1.72□□□□□ -2.13
LSM1P1-201ENST00000438629 CLPSL1A2RUU4 121 aa1.72□□□□□ -2.13
LSM1P1-201ENST00000438629 KRTAP13-1Q8IUC0 172 aa1.72□□□□□ -2.13
LSM1P1-201ENST00000438629 ZCCHC13Q8WW36 166 aaKnown RBP1.72□□□□□ -2.13
LSM1P1-201ENST00000438629 PRR15LQ9BU68 103 aa1.72□□□□□ -2.13
LSM1P1-201ENST00000438629 PRO2289Q9P1D8 64 aa1.72□□□□□ -2.13
LSM1P1-201ENST00000438629 ABRACLQ9P1F3 81 aa1.72□□□□□ -2.13
LSM1P1-201ENST00000438629 LENEPQ9Y5L5 61 aa1.72□□□□□ -2.13
LSM1P1-201ENST00000438629 SNURFQ9Y675 71 aa1.72□□□□□ -2.13
LSM1P1-201ENST00000438629 LRRC37A3O60309 1634 aa1.72□□□□□ -2.13
LSM1P1-201ENST00000438629 SDK2Q58EX2 2172 aa1.72□□□□□ -2.13
LSM1P1-201ENST00000438629 DLEC1Q9Y238 1755 aa1.72□□□□□ -2.13
LSM1P1-201ENST00000438629 PRR14LQ5THK1 2151 aa1.71□□□□□ -2.14
LSM1P1-201ENST00000438629 TNRC6BQ9UPQ9 1833 aaKnown RBP1.71□□□□□ -2.14
LSM1P1-201ENST00000438629 DEPDC5O75140 1603 aa1.71□□□□□ -2.14
LSM1P1-201ENST00000438629 A0A0J9YY99 117 aa1.71□□□□□ -2.14
LSM1P1-201ENST00000438629 D6R8Y8 96 aa1.71□□□□□ -2.14
LSM1P1-201ENST00000438629 J3QRE1 110 aa1.71□□□□□ -2.14
LSM1P1-201ENST00000438629 IGHV3-30P01768 117 aa1.71□□□□□ -2.14
LSM1P1-201ENST00000438629 IGHV3-30-5P0DP03 117 aa1.71□□□□□ -2.14
LSM1P1-201ENST00000438629 ELOF1P60002 83 aaKnown RBP1.71□□□□□ -2.14
LSM1P1-201ENST00000438629 MUSTN1Q8IVN3 82 aa1.71□□□□□ -2.14
LSM1P1-201ENST00000438629 CCL26Q9Y258 94 aa1.71□□□□□ -2.14
LSM1P1-201ENST00000438629 LHFPL6Q9Y693 200 aa1.71□□□□□ -2.14
LSM1P1-201ENST00000438629 PCDH15Q96QU1 1955 aa1.7□□□□□ -2.14
LSM1P1-201ENST00000438629 MPDZO75970 2070 aa1.7□□□□□ -2.14
LSM1P1-201ENST00000438629 IGKV3D-7A0A0C4DH55 119 aa1.7□□□□□ -2.14
LSM1P1-201ENST00000438629 HIGD1CA8MV81 97 aa1.7□□□□□ -2.14
LSM1P1-201ENST00000438629 HMGA1P17096 107 aaKnown RBP1.7□□□□□ -2.14
LSM1P1-201ENST00000438629 CAV3P56539 151 aa1.7□□□□□ -2.14
LSM1P1-201ENST00000438629 C1orf137Q5JT78 98 aa1.7□□□□□ -2.14
LSM1P1-201ENST00000438629 FDCSPQ8NFU4 85 aa1.7□□□□□ -2.14
LSM1P1-201ENST00000438629 ZNF563Q8TA94 476 aa1.7□□□□□ -2.14
LSM1P1-201ENST00000438629 DMAC1Q96GE9 116 aa1.7□□□□□ -2.14
LSM1P1-201ENST00000438629 ORMDL1Q9P0S3 153 aa1.7□□□□□ -2.14
LSM1P1-201ENST00000438629 DDX60Q8IY21 1712 aaKnown RBP1.69□□□□□ -2.14
LSM1P1-201ENST00000438629 TOGARAM1Q9Y4F4 1720 aa1.69□□□□□ -2.14
LSM1P1-201ENST00000438629 TRBV6-5A0A0K0K1A5 114 aa1.69□□□□□ -2.14
LSM1P1-201ENST00000438629 TRBV30A0A0K0K1B3 111 aa1.69□□□□□ -2.14
LSM1P1-201ENST00000438629 NUPR2A6NF83 97 aa1.69□□□□□ -2.14
LSM1P1-201ENST00000438629 PPP1R17O96001 155 aa1.69□□□□□ -2.14
LSM1P1-201ENST00000438629 DNAL4O96015 105 aa1.69□□□□□ -2.14
LSM1P1-201ENST00000438629 FCER1GP30273 86 aa1.69□□□□□ -2.14
LSM1P1-201ENST00000438629 KRTAP5-2Q701N4 177 aa1.69□□□□□ -2.14
LSM1P1-201ENST00000438629 DUOX1Q9NRD9 1551 aa1.68□□□□□ -2.14
LSM1P1-201ENST00000438629 MED13Q9UHV7 2174 aa1.68□□□□□ -2.14
LSM1P1-201ENST00000438629 IGKV3-7A0A075B6H7 116 aa1.68□□□□□ -2.14
LSM1P1-201ENST00000438629 IFI6P09912 130 aa1.68□□□□□ -2.14
LSM1P1-201ENST00000438629 SPAG11BQ08648 103 aa1.68□□□□□ -2.14
LSM1P1-201ENST00000438629 FAM74A4Q5TZK3 123 aa1.68□□□□□ -2.14
LSM1P1-201ENST00000438629 SPAG11AQ6PDA7 123 aa1.68□□□□□ -2.14
LSM1P1-201ENST00000438629 MRPL36Q9P0J6 103 aaKnown RBP1.68□□□□□ -2.14
LSM1P1-201ENST00000438629 COL4A5P29400 1685 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms