RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 TMEM208Q9BTX3 173 aa4.29□□□□□ -1.72
SPEN-202ENST00000438066 MRPL16Q9NX20 251 aaKnown RBP4.29□□□□□ -1.72
SPEN-202ENST00000438066 TP73-AS1Q9UF72 201 aa4.29□□□□□ -1.72
SPEN-202ENST00000438066 FBN1P35555 2871 aaKnown RBP4.28□□□□□ -1.72
SPEN-202ENST00000438066 A0A087WX48 190 aa4.28□□□□□ -1.72
SPEN-202ENST00000438066 LINC01549A6NIU2 74 aa4.28□□□□□ -1.72
SPEN-202ENST00000438066 IGIPA6NJ69 53 aa4.28□□□□□ -1.72
SPEN-202ENST00000438066 IGHV3-53P01767 116 aa4.28□□□□□ -1.72
SPEN-202ENST00000438066 G0S2P27469 103 aa4.28□□□□□ -1.72
SPEN-202ENST00000438066 RHOHQ15669 191 aa4.28□□□□□ -1.72
SPEN-202ENST00000438066 Q6ZVH6 145 aa4.28□□□□□ -1.72
SPEN-202ENST00000438066 GTSCR1Q86UQ5 136 aa4.28□□□□□ -1.72
SPEN-202ENST00000438066 LINC00469Q8N7U9 141 aa4.28□□□□□ -1.72
SPEN-202ENST00000438066 SCGB3A1Q96QR1 104 aa4.28□□□□□ -1.72
SPEN-202ENST00000438066 KRTAP9-8Q9BYQ0 159 aa4.28□□□□□ -1.72
SPEN-202ENST00000438066 HHLA3Q9XRX5 114 aa4.28□□□□□ -1.72
SPEN-202ENST00000438066 CYSLTR1Q9Y271 337 aa4.28□□□□□ -1.72
SPEN-202ENST00000438066 MRPS16Q9Y3D3 137 aaKnown RBP4.28□□□□□ -1.72
SPEN-202ENST00000438066 TRRAPQ9Y4A5 3859 aa4.28□□□□□ -1.73
SPEN-202ENST00000438066 IGHV3-73A0A0B4J1V6 119 aa4.27□□□□□ -1.73
SPEN-202ENST00000438066 M0R143 59 aa4.27□□□□□ -1.73
SPEN-202ENST00000438066 DPM2O94777 84 aa4.27□□□□□ -1.73
SPEN-202ENST00000438066 P0DMU3 169 aa4.27□□□□□ -1.73
SPEN-202ENST00000438066 FAM231AP0DMU4 169 aa4.27□□□□□ -1.73
SPEN-202ENST00000438066 FAM231CP0DMU5 169 aa4.27□□□□□ -1.73
SPEN-202ENST00000438066 COX8AP10176 69 aa4.27□□□□□ -1.73
SPEN-202ENST00000438066 FGF6P10767 208 aa4.27□□□□□ -1.73
SPEN-202ENST00000438066 RPL39P62891 51 aaKnown RBP4.27□□□□□ -1.73
SPEN-202ENST00000438066 PRR3P79522 188 aaKnown RBP4.27□□□□□ -1.73
SPEN-202ENST00000438066 RPL18AQ02543 176 aaKnown RBP4.27□□□□□ -1.73
SPEN-202ENST00000438066 DAZ2Q13117 558 aaKnown RBP4.27□□□□□ -1.73
SPEN-202ENST00000438066 SLC25A34Q6PIV7 304 aa4.27□□□□□ -1.73
SPEN-202ENST00000438066 TIMM17AQ99595 171 aa4.27□□□□□ -1.73
SPEN-202ENST00000438066 MRPL35Q9NZE8 188 aaKnown RBP4.27□□□□□ -1.73
SPEN-202ENST00000438066 TP53TG1Q9Y2A0 90 aa4.27□□□□□ -1.73
SPEN-202ENST00000438066 F8VRH5 84 aa4.26□□□□□ -1.73
SPEN-202ENST00000438066 I3L3M4 83 aa4.26□□□□□ -1.73
SPEN-202ENST00000438066 IGKCP01834 107 aa4.26□□□□□ -1.73
SPEN-202ENST00000438066 PLNP26678 52 aa4.26□□□□□ -1.73
SPEN-202ENST00000438066 Q6ZTI0 123 aa4.26□□□□□ -1.73
SPEN-202ENST00000438066 WFDC9Q8NEX5 89 aa4.26□□□□□ -1.73
SPEN-202ENST00000438066 COL6A5A8TX70 2615 aa4.26□□□□□ -1.73
SPEN-202ENST00000438066 TRGV1A0A0A0MS02 117 aa4.26□□□□□ -1.73
SPEN-202ENST00000438066 TRAV4A0A0B4J268 109 aa4.26□□□□□ -1.73
SPEN-202ENST00000438066 DLEU1O43261 78 aa4.26□□□□□ -1.73
SPEN-202ENST00000438066 C2orf91Q6ZV80 131 aa4.26□□□□□ -1.73
SPEN-202ENST00000438066 BOD1L2Q8IYS8 172 aa4.26□□□□□ -1.73
SPEN-202ENST00000438066 DEFB104AQ8WTQ1 72 aa4.26□□□□□ -1.73
SPEN-202ENST00000438066 TMEM141Q96I45 108 aa4.26□□□□□ -1.73
SPEN-202ENST00000438066 DNAJC30Q96LL9 226 aa4.26□□□□□ -1.73
SPEN-202ENST00000438066 IGKV2D-26A0A0A0MRZ7 120 aa4.25□□□□□ -1.73
SPEN-202ENST00000438066 RRN3P1Q2M238 152 aa4.25□□□□□ -1.73
SPEN-202ENST00000438066 NOP10Q9NPE3 64 aaKnown RBP4.25□□□□□ -1.73
SPEN-202ENST00000438066 IGLV4-69A0A075B6H9 119 aa4.24□□□□□ -1.73
SPEN-202ENST00000438066 M0QXV9 152 aa4.24□□□□□ -1.73
SPEN-202ENST00000438066 C5orf47Q569G3 176 aa4.24□□□□□ -1.73
SPEN-202ENST00000438066 PCP2Q8IVA1 136 aa4.24□□□□□ -1.73
SPEN-202ENST00000438066 FAM104AQ969W3 186 aa4.24□□□□□ -1.73
SPEN-202ENST00000438066 CST9LQ9H4G1 147 aa4.24□□□□□ -1.73
SPEN-202ENST00000438066 NBEAL1Q6ZS30 2694 aa4.24□□□□□ -1.73
SPEN-202ENST00000438066 TRBV10-1A0A0K0K1A3 114 aa4.24□□□□□ -1.73
SPEN-202ENST00000438066 A0A1B0GV90 55 aa4.24□□□□□ -1.73
SPEN-202ENST00000438066 TCTAP57738 103 aa4.24□□□□□ -1.73
SPEN-202ENST00000438066 PMVKQ15126 192 aa4.24□□□□□ -1.73
SPEN-202ENST00000438066 LINC00612Q8N6U2 182 aa4.24□□□□□ -1.73
SPEN-202ENST00000438066 CHCHD7Q9BUK0 85 aa4.24□□□□□ -1.73
SPEN-202ENST00000438066 TRBV7-3A0A075B6L6 115 aa4.23□□□□□ -1.73
SPEN-202ENST00000438066 SMIM26A0A096LP01 95 aa4.23□□□□□ -1.73
SPEN-202ENST00000438066 A0A0J9YXV3 536 aa4.23□□□□□ -1.73
SPEN-202ENST00000438066 NMUP48645 174 aa4.23□□□□□ -1.73
SPEN-202ENST00000438066 HINT1P49773 126 aaPredicted RBP4.23□□□□□ -1.73
SPEN-202ENST00000438066 MPV17L2Q567V2 206 aa4.23□□□□□ -1.73
SPEN-202ENST00000438066 SLC25A29Q8N8R3 303 aa4.23□□□□□ -1.73
SPEN-202ENST00000438066 NOTCH1P46531 2555 aa4.23□□□□□ -1.73
SPEN-202ENST00000438066 TRGV2A0A075B6R0 118 aa4.22□□□□□ -1.73
SPEN-202ENST00000438066 FAM240AA0A1B0GVK7 77 aa4.22□□□□□ -1.73
SPEN-202ENST00000438066 SMIM9A6NGZ8 99 aa4.22□□□□□ -1.73
SPEN-202ENST00000438066 C11orf86A6NJI1 115 aa4.22□□□□□ -1.73
SPEN-202ENST00000438066 CRYBA4P53673 196 aa4.22□□□□□ -1.73
SPEN-202ENST00000438066 UBE2D3P61077 147 aa4.22□□□□□ -1.73
SPEN-202ENST00000438066 UBE2D2P62837 147 aa4.22□□□□□ -1.73
SPEN-202ENST00000438066 BATFQ16520 125 aa4.22□□□□□ -1.73
SPEN-202ENST00000438066 COL5A1-AS1Q5SY13 56 aa4.22□□□□□ -1.73
SPEN-202ENST00000438066 BVES-AS1Q5T3Y7 98 aa4.22□□□□□ -1.73
SPEN-202ENST00000438066 FAM19A1Q7Z5A9 133 aa4.22□□□□□ -1.73
SPEN-202ENST00000438066 AMELXQ99217 191 aa4.22□□□□□ -1.73
SPEN-202ENST00000438066 TTTY13Q9BZ97 58 aa4.22□□□□□ -1.73
SPEN-202ENST00000438066 SPANXA1Q9NS26 97 aa4.22□□□□□ -1.73
SPEN-202ENST00000438066 IGHV3OR16-9A0A0B4J2B5 98 aa4.21□□□□□ -1.73
SPEN-202ENST00000438066 TRBV6-4A0A1B0GX49 114 aa4.21□□□□□ -1.73
SPEN-202ENST00000438066 LINC00694P0DN24 101 aa4.21□□□□□ -1.73
SPEN-202ENST00000438066 HERVK_113P61574 105 aa4.21□□□□□ -1.73
SPEN-202ENST00000438066 CAMK2N1Q7Z7J9 78 aa4.21□□□□□ -1.73
SPEN-202ENST00000438066 ZNRF2Q8NHG8 242 aa4.21□□□□□ -1.73
SPEN-202ENST00000438066 DAZ3Q9NR90 486 aaKnown RBP4.21□□□□□ -1.73
SPEN-202ENST00000438066 HIGD1BQ9P298 99 aa4.21□□□□□ -1.73
SPEN-202ENST00000438066 UBE2D4Q9Y2X8 147 aa4.21□□□□□ -1.73
SPEN-202ENST00000438066 TENM3Q9P273 2699 aa4.21□□□□□ -1.74
SPEN-202ENST00000438066 TRBV25-1A0A075B6N4 114 aa4.21□□□□□ -1.74
SPEN-202ENST00000438066 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms