RNA–Protein interactions for RNA: ENST00000437966.3

CHRNA7-202, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 2

Gene CHRNA7, Length 1,788 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-202ENST00000437966 IGHV3-33P01772 117 aa13.35□□□□□ -0.27
CHRNA7-202ENST00000437966 IGHV3-30-5P0DP03 117 aa13.35□□□□□ -0.27
CHRNA7-202ENST00000437966 LGALS3P17931 250 aaKnown RBP13.35□□□□□ -0.27
CHRNA7-202ENST00000437966 WFDC10BQ8IUB3 73 aa13.35□□□□□ -0.27
CHRNA7-202ENST00000437966 IGHV1-58A0A0C4DH39 117 aa13.34□□□□□ -0.27
CHRNA7-202ENST00000437966 SIVA1O15304 175 aa13.34□□□□□ -0.27
CHRNA7-202ENST00000437966 SEC11AP67812 179 aa13.34□□□□□ -0.27
CHRNA7-202ENST00000437966 IGLL5B9A064 214 aa13.33□□□□□ -0.28
CHRNA7-202ENST00000437966 H3BRM9 83 aa13.33□□□□□ -0.28
CHRNA7-202ENST00000437966 MEGF8Q7Z7M0 2845 aa13.33□□□□□ -0.28
CHRNA7-202ENST00000437966 PRKDCP78527 4128 aaKnown RBP13.33□□□□□ -0.28
CHRNA7-202ENST00000437966 XCL1P47992 114 aa13.31□□□□□ -0.28
CHRNA7-202ENST00000437966 IGLV10-54A0A075B6I4 117 aa13.3□□□□□ -0.28
CHRNA7-202ENST00000437966 CCL25O15444 150 aa13.3□□□□□ -0.28
CHRNA7-202ENST00000437966 REG3AQ06141 175 aa13.3□□□□□ -0.28
CHRNA7-202ENST00000437966 C5orf38Q86SI9 138 aa13.3□□□□□ -0.28
CHRNA7-202ENST00000437966 KLK12Q9UKR0 248 aa13.3□□□□□ -0.28
CHRNA7-202ENST00000437966 SMIM1B2RUZ4 78 aa13.3□□□□□ -0.28
CHRNA7-202ENST00000437966 SS18Q15532 418 aa13.3□□□□□ -0.28
CHRNA7-202ENST00000437966 BVES-AS1Q5T3Y7 98 aa13.3□□□□□ -0.28
CHRNA7-202ENST00000437966 SCGB1D4Q6XE38 83 aa13.3□□□□□ -0.28
CHRNA7-202ENST00000437966 HIGD1BQ9P298 99 aa13.3□□□□□ -0.28
CHRNA7-202ENST00000437966 IGHV3OR16-9A0A0B4J2B5 98 aa13.27□□□□□ -0.28
CHRNA7-202ENST00000437966 NHLRC4P0CG21 123 aaPredicted RBP13.27□□□□□ -0.28
CHRNA7-202ENST00000437966 STAB2Q8WWQ8 2551 aa13.27□□□□□ -0.29
CHRNA7-202ENST00000437966 IGLV5-39A0A0G2JS06 123 aa13.27□□□□□ -0.29
CHRNA7-202ENST00000437966 HSD52Q0P140 79 aa13.27□□□□□ -0.29
CHRNA7-202ENST00000437966 C15orf53Q8NAA6 179 aa13.27□□□□□ -0.29
CHRNA7-202ENST00000437966 C10orf126Q8N4M7 172 aa13.26□□□□□ -0.29
CHRNA7-202ENST00000437966 ENHOQ6UWT2 76 aa13.25□□□□□ -0.29
CHRNA7-202ENST00000437966 NDUFA12Q9UI09 145 aa13.25□□□□□ -0.29
CHRNA7-202ENST00000437966 CHCHD10Q8WYQ3 142 aaPredicted RBP13.25□□□□□ -0.29
CHRNA7-202ENST00000437966 LINC00588Q9Y4M8 146 aa13.25□□□□□ -0.29
CHRNA7-202ENST00000437966 GCSHP23434 173 aa13.24□□□□□ -0.29
CHRNA7-202ENST00000437966 HIST1H4GQ99525 98 aa13.24□□□□□ -0.29
CHRNA7-202ENST00000437966 K7EP13 123 aa13.23□□□□□ -0.29
CHRNA7-202ENST00000437966 DYNC2H1Q8NCM8 4307 aaKnown RBP13.23□□□□□ -0.29
CHRNA7-202ENST00000437966 A0A087WZ39 114 aa13.22□□□□□ -0.29
CHRNA7-202ENST00000437966 A0A0J9YXY3 114 aa13.22□□□□□ -0.29
CHRNA7-202ENST00000437966 ZFAND6Q6FIF0 208 aa13.22□□□□□ -0.29
CHRNA7-202ENST00000437966 UBE2WQ96B02 151 aa13.22□□□□□ -0.29
CHRNA7-202ENST00000437966 TOMM7Q9P0U1 55 aa13.22□□□□□ -0.29
CHRNA7-202ENST00000437966 ORAOV1Q8WV07 137 aa13.21□□□□□ -0.29
CHRNA7-202ENST00000437966 ZNF625Q96I27 306 aaPredicted RBP13.21□□□□□ -0.29
CHRNA7-202ENST00000437966 PRR34Q9NV39 138 aa13.21□□□□□ -0.29
CHRNA7-202ENST00000437966 FXYD2P54710 66 aa13.2□□□□□ -0.3
CHRNA7-202ENST00000437966 Q9H8V8 135 aa13.2□□□□□ -0.3
CHRNA7-202ENST00000437966 GAGE12HA6NDE8 117 aa13.2□□□□□ -0.3
CHRNA7-202ENST00000437966 SRSF9Q13242 221 aaKnown RBP eCLIP13.2□□□□□ -0.3
CHRNA7-202ENST00000437966 COL5A1-AS1Q5SY13 56 aa13.2□□□□□ -0.3
CHRNA7-202ENST00000437966 CD164L2Q6UWJ8 174 aa13.2□□□□□ -0.3
CHRNA7-202ENST00000437966 CEND1Q8N111 149 aa13.2□□□□□ -0.3
CHRNA7-202ENST00000437966 COX7B2Q8TF08 81 aa13.2□□□□□ -0.3
CHRNA7-202ENST00000437966 Q6ZVH6 145 aa13.19□□□□□ -0.3
CHRNA7-202ENST00000437966 NDUFA1O15239 70 aa13.18□□□□□ -0.3
CHRNA7-202ENST00000437966 CRPP02741 224 aa13.18□□□□□ -0.3
CHRNA7-202ENST00000437966 CCL18P55774 89 aa13.18□□□□□ -0.3
CHRNA7-202ENST00000437966 FOXI1Q12951 378 aa13.18□□□□□ -0.3
CHRNA7-202ENST00000437966 A0A1B0GV90 55 aa13.17□□□□□ -0.3
CHRNA7-202ENST00000437966 LBHQ53QV2 105 aaPredicted RBP13.17□□□□□ -0.3
CHRNA7-202ENST00000437966 LINC01556Q5JQF7 62 aa13.17□□□□□ -0.3
CHRNA7-202ENST00000437966 COX7A2LO14548 114 aa13.17□□□□□ -0.3
CHRNA7-202ENST00000437966 PTTG1IPP53801 180 aa13.16□□□□□ -0.3
CHRNA7-202ENST00000437966 TAL2Q16559 108 aa13.16□□□□□ -0.3
CHRNA7-202ENST00000437966 ADAMTSL4-AS1Q5T5F5 129 aa13.16□□□□□ -0.3
CHRNA7-202ENST00000437966 DNAH7Q8WXX0 4024 aa13.16□□□□□ -0.3
CHRNA7-202ENST00000437966 A0A0U1RRA0 63 aa13.15□□□□□ -0.3
CHRNA7-202ENST00000437966 LITAFQ99732 161 aa13.15□□□□□ -0.3
CHRNA7-202ENST00000437966 TM2D2Q9BX73 214 aa13.15□□□□□ -0.3
CHRNA7-202ENST00000437966 APLNQ9ULZ1 77 aa13.15□□□□□ -0.3
CHRNA7-202ENST00000437966 CSMD3Q7Z407 3707 aa13.15□□□□□ -0.3
CHRNA7-202ENST00000437966 DNAH10OSP0CZ25 163 aa13.14□□□□□ -0.31
CHRNA7-202ENST00000437966 MALP21145 153 aa13.14□□□□□ -0.31
CHRNA7-202ENST00000437966 SPANXB1Q9NS25 103 aaPredicted RBP13.14□□□□□ -0.31
CHRNA7-202ENST00000437966 LYSTQ99698 3801 aa13.13□□□□□ -0.31
CHRNA7-202ENST00000437966 K7ERJ3 54 aa13.12□□□□□ -0.31
CHRNA7-202ENST00000437966 DAND5Q8N907 189 aa13.12□□□□□ -0.31
CHRNA7-202ENST00000437966 PLECQ15149 4684 aaKnown RBP13.12□□□□□ -0.31
CHRNA7-202ENST00000437966 NPC2P61916 151 aa13.12□□□□□ -0.31
CHRNA7-202ENST00000437966 C6orf226Q5I0X4 101 aa13.12□□□□□ -0.31
CHRNA7-202ENST00000437966 NHP2Q9NX24 153 aaKnown RBP13.12□□□□□ -0.31
CHRNA7-202ENST00000437966 TMEM238C9JI98 176 aa13.11□□□□□ -0.31
CHRNA7-202ENST00000437966 TAX1BP3O14907 124 aa13.11□□□□□ -0.31
CHRNA7-202ENST00000437966 MIAQ16674 131 aa13.11□□□□□ -0.31
CHRNA7-202ENST00000437966 MUSTN1Q8IVN3 82 aa13.11□□□□□ -0.31
CHRNA7-202ENST00000437966 Q9HAA7 133 aa13.11□□□□□ -0.31
CHRNA7-202ENST00000437966 TRAV8-4A0A0B4J246 113 aa13.1□□□□□ -0.31
CHRNA7-202ENST00000437966 A6NDN8 102 aa13.1□□□□□ -0.31
CHRNA7-202ENST00000437966 LINC01561Q8N1V8 128 aa13.1□□□□□ -0.31
CHRNA7-202ENST00000437966 RAB37Q96AX2 223 aa13.1□□□□□ -0.31
CHRNA7-202ENST00000437966 PRSS2P07478 247 aa13.09□□□□□ -0.31
CHRNA7-202ENST00000437966 MEIG1Q5JSS6 88 aa13.09□□□□□ -0.31
CHRNA7-202ENST00000437966 C2orf82Q6UX34 121 aa13.09□□□□□ -0.31
CHRNA7-202ENST00000437966 KRTAP26-1Q6PEX3 210 aa13.09□□□□□ -0.31
CHRNA7-202ENST00000437966 LINC00526Q96FQ7 95 aa13.09□□□□□ -0.31
CHRNA7-202ENST00000437966 DNAH1Q9P2D7 4330 aa13.08□□□□□ -0.32
CHRNA7-202ENST00000437966 SMIM13P0DJ93 91 aa13.08□□□□□ -0.32
CHRNA7-202ENST00000437966 KIAA0087Q14695 138 aa13.08□□□□□ -0.32
CHRNA7-202ENST00000437966 IGKV2D-24A0A075B6R9 120 aa13.07□□□□□ -0.32
CHRNA7-202ENST00000437966 EIF4EBP3O60516 100 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms