RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 A0A087WZ39 114 aa7.03□□□□□ -1.28
CHRNA1-207ENST00000435083 GATCO43716 136 aaKnown RBP7.03□□□□□ -1.28
CHRNA1-207ENST00000435083 PRR4Q16378 134 aa7.03□□□□□ -1.28
CHRNA1-207ENST00000435083 RNASE13Q5GAN3 156 aaKnown RBP7.03□□□□□ -1.28
CHRNA1-207ENST00000435083 C5orf38Q86SI9 138 aa7.03□□□□□ -1.28
CHRNA1-207ENST00000435083 TRAV13-1A0A0B4J241 112 aa7.02□□□□□ -1.29
CHRNA1-207ENST00000435083 H0Y9J4 135 aa7.02□□□□□ -1.29
CHRNA1-207ENST00000435083 POLR2KP53803 58 aaKnown RBP7.02□□□□□ -1.29
CHRNA1-207ENST00000435083 CT83Q5H943 113 aa7.02□□□□□ -1.29
CHRNA1-207ENST00000435083 TRBV24-1A0A075B6N3 115 aa7.01□□□□□ -1.29
CHRNA1-207ENST00000435083 A8MWL6 223 aa7.01□□□□□ -1.29
CHRNA1-207ENST00000435083 SPAG11BQ08648 103 aa7.01□□□□□ -1.29
CHRNA1-207ENST00000435083 BORCS7Q96B45 105 aa7.01□□□□□ -1.29
CHRNA1-207ENST00000435083 V9GYV3 84 aa7.01□□□□□ -1.29
CHRNA1-207ENST00000435083 IGLV1-50A0A075B6I6 118 aa7□□□□□ -1.29
CHRNA1-207ENST00000435083 TRBV27A0A0K0K1C4 114 aa7□□□□□ -1.29
CHRNA1-207ENST00000435083 COLCA2A8K830 154 aa7□□□□□ -1.29
CHRNA1-207ENST00000435083 FCER1GP30273 86 aa7□□□□□ -1.29
CHRNA1-207ENST00000435083 RNF151Q2KHN1 245 aa7□□□□□ -1.29
CHRNA1-207ENST00000435083 KRTAP9-2Q9BYQ4 174 aa7□□□□□ -1.29
CHRNA1-207ENST00000435083 A0A0U1RQV1 116 aa6.99□□□□□ -1.29
CHRNA1-207ENST00000435083 RAB5AP20339 215 aa6.99□□□□□ -1.29
CHRNA1-207ENST00000435083 KRTAP11-1Q8IUC1 163 aa6.99□□□□□ -1.29
CHRNA1-207ENST00000435083 TSKUQ8WUA8 353 aa6.99□□□□□ -1.29
CHRNA1-207ENST00000435083 YPEL4Q96NS1 127 aa6.99□□□□□ -1.29
CHRNA1-207ENST00000435083 FAM168BA1KXE4 195 aa6.99□□□□□ -1.29
CHRNA1-207ENST00000435083 VCYO14598 125 aa6.99□□□□□ -1.29
CHRNA1-207ENST00000435083 UBE2D1P51668 147 aa6.99□□□□□ -1.29
CHRNA1-207ENST00000435083 SMAGPQ0VAQ4 97 aa6.99□□□□□ -1.29
CHRNA1-207ENST00000435083 TMEM191AQ9H0A3 160 aa6.99□□□□□ -1.29
CHRNA1-207ENST00000435083 UBE2D4Q9Y2X8 147 aa6.99□□□□□ -1.29
CHRNA1-207ENST00000435083 CSDC2Q9Y534 153 aaKnown RBP6.99□□□□□ -1.29
CHRNA1-207ENST00000435083 SMIM27A0A1W2PRY6 76 aa6.98□□□□□ -1.29
CHRNA1-207ENST00000435083 SMKR1H3BMG3 65 aa6.98□□□□□ -1.29
CHRNA1-207ENST00000435083 RAB4AP20338 218 aa6.98□□□□□ -1.29
CHRNA1-207ENST00000435083 COX19Q49B96 90 aa6.98□□□□□ -1.29
CHRNA1-207ENST00000435083 Q6ZUT4 128 aa6.98□□□□□ -1.29
CHRNA1-207ENST00000435083 FAM19A5Q7Z5A7 132 aaPredicted RBP6.98□□□□□ -1.29
CHRNA1-207ENST00000435083 AMN1Q8IY45 258 aa6.98□□□□□ -1.29
CHRNA1-207ENST00000435083 NAT8BQ9UHF3 227 aa6.98□□□□□ -1.29
CHRNA1-207ENST00000435083 TGIF2-C20orf24A0A0A6YYL0 155 aa6.97□□□□□ -1.29
CHRNA1-207ENST00000435083 A0A1B0GUT8 65 aa6.97□□□□□ -1.29
CHRNA1-207ENST00000435083 KRTAP1-4P0C5Y4 121 aa6.97□□□□□ -1.29
CHRNA1-207ENST00000435083 OR10D4PQ8NGN7 298 aa6.97□□□□□ -1.29
CHRNA1-207ENST00000435083 ORAOV1Q8WV07 137 aa6.97□□□□□ -1.29
CHRNA1-207ENST00000435083 MRPL35Q9NZE8 188 aaKnown RBP6.97□□□□□ -1.29
CHRNA1-207ENST00000435083 ATP5L2Q7Z4Y8 100 aa6.96□□□□□ -1.29
CHRNA1-207ENST00000435083 LCE2BO14633 110 aa6.95□□□□□ -1.3
CHRNA1-207ENST00000435083 NDUFA1O15239 70 aa6.95□□□□□ -1.3
CHRNA1-207ENST00000435083 RPL13AP40429 203 aaKnown RBP6.95□□□□□ -1.3
CHRNA1-207ENST00000435083 UBE2BP63146 152 aa6.95□□□□□ -1.3
CHRNA1-207ENST00000435083 GAGE2EQ4V326 116 aa6.95□□□□□ -1.3
CHRNA1-207ENST00000435083 C10orf25Q5T742 122 aa6.95□□□□□ -1.3
CHRNA1-207ENST00000435083 KIR2DL4Q99706 377 aa6.95□□□□□ -1.3
CHRNA1-207ENST00000435083 GAGE2DQ9UEU5 116 aa6.95□□□□□ -1.3
CHRNA1-207ENST00000435083 HIGD1CA8MV81 97 aa6.95□□□□□ -1.3
CHRNA1-207ENST00000435083 F8WDY8 70 aa6.95□□□□□ -1.3
CHRNA1-207ENST00000435083 RAB5BP61020 215 aa6.95□□□□□ -1.3
CHRNA1-207ENST00000435083 SUMO2P61956 95 aaKnown RBP6.95□□□□□ -1.3
CHRNA1-207ENST00000435083 UNQ6190/PRO20217Q6UXQ8 127 aa6.95□□□□□ -1.3
CHRNA1-207ENST00000435083 TMEM18Q96B42 140 aa6.95□□□□□ -1.3
CHRNA1-207ENST00000435083 A0A1B0GW15 77 aa6.94□□□□□ -1.3
CHRNA1-207ENST00000435083 S100A8P05109 93 aa6.94□□□□□ -1.3
CHRNA1-207ENST00000435083 TIMM21Q9BVV7 248 aa6.94□□□□□ -1.3
CHRNA1-207ENST00000435083 M0QXV9 152 aa6.93□□□□□ -1.3
CHRNA1-207ENST00000435083 PPP1R17O96001 155 aa6.93□□□□□ -1.3
CHRNA1-207ENST00000435083 TLX1NBP0CAT3 122 aa6.93□□□□□ -1.3
CHRNA1-207ENST00000435083 NRACQ8N912 160 aa6.93□□□□□ -1.3
CHRNA1-207ENST00000435083 C6orf48Q9UBA6 75 aa6.93□□□□□ -1.3
CHRNA1-207ENST00000435083 MUC2Q02817 5179 aa6.93□□□□□ -1.3
CHRNA1-207ENST00000435083 IGHV3OR16-9A0A0B4J2B5 98 aa6.92□□□□□ -1.3
CHRNA1-207ENST00000435083 TSPAN13O95857 204 aa6.92□□□□□ -1.3
CHRNA1-207ENST00000435083 HBBP68871 147 aa6.92□□□□□ -1.3
CHRNA1-207ENST00000435083 RIGQ13278 110 aa6.92□□□□□ -1.3
CHRNA1-207ENST00000435083 KRTAP7-1Q8IUC3 87 aa6.92□□□□□ -1.3
CHRNA1-207ENST00000435083 GNB1LQ9BYB4 327 aa6.92□□□□□ -1.3
CHRNA1-207ENST00000435083 RPL39P62891 51 aaKnown RBP6.91□□□□□ -1.3
CHRNA1-207ENST00000435083 TRAPPC1Q9Y5R8 145 aa6.91□□□□□ -1.3
CHRNA1-207ENST00000435083 TRGC2P03986 189 aa6.91□□□□□ -1.3
CHRNA1-207ENST00000435083 MRPL54Q6P161 138 aaKnown RBP6.91□□□□□ -1.3
CHRNA1-207ENST00000435083 IFITM10A6NMD0 228 aa6.9□□□□□ -1.31
CHRNA1-207ENST00000435083 FAM104AQ969W3 186 aa6.9□□□□□ -1.31
CHRNA1-207ENST00000435083 LOC105371267A0A1B0GV96 52 aa6.89□□□□□ -1.31
CHRNA1-207ENST00000435083 A0A1B0GXF2 115 aa6.89□□□□□ -1.31
CHRNA1-207ENST00000435083 S100A6P06703 90 aa6.89□□□□□ -1.31
CHRNA1-207ENST00000435083 MRPL51Q4U2R6 128 aaKnown RBP6.89□□□□□ -1.31
CHRNA1-207ENST00000435083 FABP9Q0Z7S8 132 aa6.88□□□□□ -1.31
CHRNA1-207ENST00000435083 KIAA0087Q14695 138 aa6.88□□□□□ -1.31
CHRNA1-207ENST00000435083 TMEM136Q6ZRR5 245 aa6.88□□□□□ -1.31
CHRNA1-207ENST00000435083 C20orf78Q9BR46 151 aa6.88□□□□□ -1.31
CHRNA1-207ENST00000435083 MRPL18Q9H0U6 180 aaKnown RBP6.88□□□□□ -1.31
CHRNA1-207ENST00000435083 SPANXA1Q9NS26 97 aa6.88□□□□□ -1.31
CHRNA1-207ENST00000435083 KRTAP9-6A0A140TA67 174 aa6.87□□□□□ -1.31
CHRNA1-207ENST00000435083 TCAPO15273 167 aa6.87□□□□□ -1.31
CHRNA1-207ENST00000435083 ZNF861PO60384 105 aa6.87□□□□□ -1.31
CHRNA1-207ENST00000435083 CKS2P33552 79 aa6.87□□□□□ -1.31
CHRNA1-207ENST00000435083 MRPS36P82909 103 aaKnown RBP6.87□□□□□ -1.31
CHRNA1-207ENST00000435083 C9orf129Q5T035 196 aaKnown RBP6.87□□□□□ -1.31
CHRNA1-207ENST00000435083 LCE2AQ5TA79 106 aaPredicted RBP6.87□□□□□ -1.31
CHRNA1-207ENST00000435083 FAM104BQ5XKR9 115 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms