RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 PLNP26678 52 aa3.08□□□□□ -1.92
UBE4A-202ENST00000431736 RPL23P62829 140 aaKnown RBP3.08□□□□□ -1.92
UBE4A-202ENST00000431736 AMN1Q8IY45 258 aa3.08□□□□□ -1.92
UBE4A-202ENST00000431736 M0R143 59 aa3.08□□□□□ -1.92
UBE4A-202ENST00000431736 Q6ZRU5 148 aa3.08□□□□□ -1.92
UBE4A-202ENST00000431736 TIMM17AQ99595 171 aa3.08□□□□□ -1.92
UBE4A-202ENST00000431736 SMG1Q96Q15 3661 aaKnown RBP3.08□□□□□ -1.92
UBE4A-202ENST00000431736 KRTAP10-2P60368 255 aa3.07□□□□□ -1.92
UBE4A-202ENST00000431736 FAM19A1Q7Z5A9 133 aa3.07□□□□□ -1.92
UBE4A-202ENST00000431736 SMIM2Q9BVW6 85 aa3.07□□□□□ -1.92
UBE4A-202ENST00000431736 TMEM126AQ9H061 195 aa3.07□□□□□ -1.92
UBE4A-202ENST00000431736 TSPAN13O95857 204 aa3.07□□□□□ -1.92
UBE4A-202ENST00000431736 IFITM2Q01629 132 aa3.07□□□□□ -1.92
UBE4A-202ENST00000431736 C11orf52Q96A22 123 aa3.07□□□□□ -1.92
UBE4A-202ENST00000431736 HRNRQ86YZ3 2850 aaPredicted RBP3.07□□□□□ -1.92
UBE4A-202ENST00000431736 A0A087WYN8 130 aa3.07□□□□□ -1.92
UBE4A-202ENST00000431736 LINC00959A0A1B0GUT2 108 aa3.07□□□□□ -1.92
UBE4A-202ENST00000431736 M0QY20 66 aa3.07□□□□□ -1.92
UBE4A-202ENST00000431736 FUSP35637 526 aaKnown RBP eCLIP3.07□□□□□ -1.92
UBE4A-202ENST00000431736 LINC01620Q4KN68 170 aa3.07□□□□□ -1.92
UBE4A-202ENST00000431736 C9orf163Q8N9P6 203 aa3.07□□□□□ -1.92
UBE4A-202ENST00000431736 KIF25-AS1Q9Y6Z4 181 aa3.07□□□□□ -1.92
UBE4A-202ENST00000431736 PFN2P35080 140 aa3.07□□□□□ -1.92
UBE4A-202ENST00000431736 KRTAP10-1P60331 282 aa3.07□□□□□ -1.92
UBE4A-202ENST00000431736 RNASE13Q5GAN3 156 aaKnown RBP3.07□□□□□ -1.92
UBE4A-202ENST00000431736 FAM231DQ6ZW35 169 aa3.07□□□□□ -1.92
UBE4A-202ENST00000431736 PLEKHB2Q96CS7 222 aa3.07□□□□□ -1.92
UBE4A-202ENST00000431736 PSORS1C2Q9UIG4 136 aa3.07□□□□□ -1.92
UBE4A-202ENST00000431736 LOC107984156A0A0G2JMH3 177 aa3.07□□□□□ -1.92
UBE4A-202ENST00000431736 K7EMI3 77 aa3.07□□□□□ -1.92
UBE4A-202ENST00000431736 IL15RAQ13261 267 aa3.07□□□□□ -1.92
UBE4A-202ENST00000431736 ARL17AQ8IVW1 177 aa3.07□□□□□ -1.92
UBE4A-202ENST00000431736 FAM19A4Q96LR4 140 aa3.07□□□□□ -1.92
UBE4A-202ENST00000431736 CDIP1Q9H305 208 aa3.07□□□□□ -1.92
UBE4A-202ENST00000431736 MYMXA0A1B0GTQ4 84 aa3.06□□□□□ -1.92
UBE4A-202ENST00000431736 FAM104BQ5XKR9 115 aa3.06□□□□□ -1.92
UBE4A-202ENST00000431736 SPINK6Q6UWN8 80 aa3.06□□□□□ -1.92
UBE4A-202ENST00000431736 TRBV30A0A0K0K1B3 111 aa3.06□□□□□ -1.92
UBE4A-202ENST00000431736 SMKR1H3BMG3 65 aa3.06□□□□□ -1.92
UBE4A-202ENST00000431736 SMIM13P0DJ93 91 aa3.06□□□□□ -1.92
UBE4A-202ENST00000431736 CRYGAP11844 174 aa3.06□□□□□ -1.92
UBE4A-202ENST00000431736 PMVKQ15126 192 aa3.06□□□□□ -1.92
UBE4A-202ENST00000431736 C9orf153Q5TBE3 101 aa3.06□□□□□ -1.92
UBE4A-202ENST00000431736 CBLN2Q8IUK8 224 aa3.06□□□□□ -1.92
UBE4A-202ENST00000431736 RPL39LQ96EH5 51 aaKnown RBP3.06□□□□□ -1.92
UBE4A-202ENST00000431736 J3QR89 54 aa3.06□□□□□ -1.92
UBE4A-202ENST00000431736 NUPR1O60356 82 aa3.06□□□□□ -1.92
UBE4A-202ENST00000431736 DPM2O94777 84 aa3.06□□□□□ -1.92
UBE4A-202ENST00000431736 CTRLP40313 264 aa3.06□□□□□ -1.92
UBE4A-202ENST00000431736 TIMM21Q9BVV7 248 aa3.06□□□□□ -1.92
UBE4A-202ENST00000431736 GAGE10A6NGK3 116 aa3.06□□□□□ -1.92
UBE4A-202ENST00000431736 PMCHL1Q16048 86 aa3.06□□□□□ -1.92
UBE4A-202ENST00000431736 C9orf116Q5BN46 136 aaPredicted RBP3.06□□□□□ -1.92
UBE4A-202ENST00000431736 C2orf66Q6UXQ4 117 aa3.06□□□□□ -1.92
UBE4A-202ENST00000431736 HIGD2AQ9BW72 106 aa3.06□□□□□ -1.92
UBE4A-202ENST00000431736 MUC4Q99102 2169 aa3.06□□□□□ -1.92
UBE4A-202ENST00000431736 TRGC2P03986 189 aa3.06□□□□□ -1.92
UBE4A-202ENST00000431736 LINC00614P0C842 121 aa3.06□□□□□ -1.92
UBE4A-202ENST00000431736 FBN1P35555 2871 aaKnown RBP3.05□□□□□ -1.92
UBE4A-202ENST00000431736 NUP35Q8NFH5 326 aa3.05□□□□□ -1.92
UBE4A-202ENST00000431736 IFI27L1Q96BM0 104 aa3.05□□□□□ -1.92
UBE4A-202ENST00000431736 VPS25Q9BRG1 176 aa3.05□□□□□ -1.92
UBE4A-202ENST00000431736 TYMSOSQ8TAI1 123 aa3.05□□□□□ -1.92
UBE4A-202ENST00000431736 ZNF625Q96I27 306 aaPredicted RBP3.05□□□□□ -1.92
UBE4A-202ENST00000431736 C11orf1Q9H5F2 150 aa3.05□□□□□ -1.92
UBE4A-202ENST00000431736 FAM19A2Q8N3H0 131 aa3.05□□□□□ -1.92
UBE4A-202ENST00000431736 Q8N8P6 123 aa3.05□□□□□ -1.92
UBE4A-202ENST00000431736 COX7B2Q8TF08 81 aa3.05□□□□□ -1.92
UBE4A-202ENST00000431736 OPRPNQ99935 248 aaPredicted RBP3.05□□□□□ -1.92
UBE4A-202ENST00000431736 LEPROTO15243 131 aa3.05□□□□□ -1.92
UBE4A-202ENST00000431736 LINC01551Q86U37 167 aa3.05□□□□□ -1.92
UBE4A-202ENST00000431736 LAMA5O15230 3695 aa3.05□□□□□ -1.92
UBE4A-202ENST00000431736 HERV-K104P63124 156 aa3.04□□□□□ -1.92
UBE4A-202ENST00000431736 TAL2Q16559 108 aa3.04□□□□□ -1.92
UBE4A-202ENST00000431736 GATD1Q8NB37 220 aa3.04□□□□□ -1.92
UBE4A-202ENST00000431736 A0A1B0GV72 72 aa3.04□□□□□ -1.92
UBE4A-202ENST00000431736 MRPL51Q4U2R6 128 aaKnown RBP3.04□□□□□ -1.92
UBE4A-202ENST00000431736 CIRBP-AS1Q8TBR5 109 aa3.04□□□□□ -1.92
UBE4A-202ENST00000431736 C11orf21Q9P2W6 132 aa3.04□□□□□ -1.92
UBE4A-202ENST00000431736 PAM16Q9Y3D7 125 aa3.04□□□□□ -1.92
UBE4A-202ENST00000431736 NPC2P61916 151 aa3.04□□□□□ -1.92
UBE4A-202ENST00000431736 C20orf203Q8NBC4 194 aa3.04□□□□□ -1.92
UBE4A-202ENST00000431736 NHP2Q9NX24 153 aaKnown RBP3.04□□□□□ -1.92
UBE4A-202ENST00000431736 IGKCP01834 107 aa3.04□□□□□ -1.92
UBE4A-202ENST00000431736 ZNF726P1Q15940 193 aa3.04□□□□□ -1.92
UBE4A-202ENST00000431736 GNB1LQ9BYB4 327 aa3.04□□□□□ -1.92
UBE4A-202ENST00000431736 SNRPEP62304 92 aaKnown RBP3.03□□□□□ -1.92
UBE4A-202ENST00000431736 IGLV1-50A0A075B6I6 118 aa3.03□□□□□ -1.92
UBE4A-202ENST00000431736 LINC00526Q96FQ7 95 aa3.03□□□□□ -1.92
UBE4A-202ENST00000431736 TRBV6-5A0A0K0K1A5 114 aa3.03□□□□□ -1.92
UBE4A-202ENST00000431736 NPSP0C0P6 89 aa3.03□□□□□ -1.92
UBE4A-202ENST00000431736 ESDP10768 282 aa3.03□□□□□ -1.92
UBE4A-202ENST00000431736 RNF151Q2KHN1 245 aa3.03□□□□□ -1.92
UBE4A-202ENST00000431736 Q6ZUT4 128 aa3.03□□□□□ -1.92
UBE4A-202ENST00000431736 CHCHD1Q96BP2 118 aaKnown RBP3.03□□□□□ -1.92
UBE4A-202ENST00000431736 TENM2Q9NT68 2774 aa3.03□□□□□ -1.92
UBE4A-202ENST00000431736 IGLC6P0CF74 106 aa3.03□□□□□ -1.92
UBE4A-202ENST00000431736 CNBPP62633 177 aaKnown RBP3.03□□□□□ -1.92
UBE4A-202ENST00000431736 RELNP78509 3460 aa3.03□□□□□ -1.92
UBE4A-202ENST00000431736 GVQW2A0A096LPI5 108 aaPredicted RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms