RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 C5orf38Q86SI9 138 aa12.06□□□□□ -0.48
DDR1-236ENST00000431373 C9orf163Q8N9P6 203 aa12.06□□□□□ -0.48
DDR1-236ENST00000431373 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.05□□□□□ -0.48
DDR1-236ENST00000431373 IGHV3OR16-9A0A0B4J2B5 98 aa12.05□□□□□ -0.48
DDR1-236ENST00000431373 UBE2D1P51668 147 aa12.05□□□□□ -0.48
DDR1-236ENST00000431373 SLPIP03973 132 aa12.04□□□□□ -0.48
DDR1-236ENST00000431373 LINC00242Q5T6M2 205 aa12.04□□□□□ -0.48
DDR1-236ENST00000431373 A0A096LNJ9 63 aa12.03□□□□□ -0.48
DDR1-236ENST00000431373 APOMO95445 188 aa12.03□□□□□ -0.48
DDR1-236ENST00000431373 HBDP02042 147 aa12.03□□□□□ -0.48
DDR1-236ENST00000431373 HERC2O95714 4834 aa12.03□□□□□ -0.48
DDR1-236ENST00000431373 ZNF561-AS1K7EIQ3 104 aa12.02□□□□□ -0.49
DDR1-236ENST00000431373 FAM30AQ9NZY2 134 aa12.02□□□□□ -0.49
DDR1-236ENST00000431373 XGP55808 180 aa12.01□□□□□ -0.49
DDR1-236ENST00000431373 COX6A2Q02221 97 aa12.01□□□□□ -0.49
DDR1-236ENST00000431373 PMCHL1Q16048 86 aa12.01□□□□□ -0.49
DDR1-236ENST00000431373 Q6ZSA8 131 aa12.01□□□□□ -0.49
DDR1-236ENST00000431373 FAM19A3Q7Z5A8 133 aa12.01□□□□□ -0.49
DDR1-236ENST00000431373 CHCHD1Q96BP2 118 aaKnown RBP12.01□□□□□ -0.49
DDR1-236ENST00000431373 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12□□□□□ -0.49
DDR1-236ENST00000431373 LINC00526Q96FQ7 95 aa12□□□□□ -0.49
DDR1-236ENST00000431373 RYR1P21817 5038 aa11.99□□□□□ -0.49
DDR1-236ENST00000431373 IGHV3-64A0A075B6Q5 118 aa11.99□□□□□ -0.49
DDR1-236ENST00000431373 A0A087WZ39 114 aa11.99□□□□□ -0.49
DDR1-236ENST00000431373 SEC11AP67812 179 aa11.99□□□□□ -0.49
DDR1-236ENST00000431373 BAGE3Q86Y29 109 aa11.99□□□□□ -0.49
DDR1-236ENST00000431373 OR10D4PQ8NGN7 298 aa11.99□□□□□ -0.49
DDR1-236ENST00000431373 APOBP04114 4563 aaKnown RBP11.99□□□□□ -0.49
DDR1-236ENST00000431373 PDZD11Q5EBL8 140 aa11.98□□□□□ -0.49
DDR1-236ENST00000431373 ORAOV1Q8WV07 137 aa11.98□□□□□ -0.49
DDR1-236ENST00000431373 IGLV4-69A0A075B6H9 119 aa11.97□□□□□ -0.49
DDR1-236ENST00000431373 HERVK_113P63121 156 aa11.97□□□□□ -0.49
DDR1-236ENST00000431373 HAMPP81172 84 aa11.97□□□□□ -0.49
DDR1-236ENST00000431373 SPAG11BQ08648 103 aa11.97□□□□□ -0.49
DDR1-236ENST00000431373 PMVKQ15126 192 aa11.97□□□□□ -0.49
DDR1-236ENST00000431373 SDIM1Q6ZPB5 146 aa11.97□□□□□ -0.49
DDR1-236ENST00000431373 CST9LQ9H4G1 147 aa11.97□□□□□ -0.49
DDR1-236ENST00000431373 A0A0J9YXV3 536 aa11.96□□□□□ -0.49
DDR1-236ENST00000431373 ATP5LO75964 103 aa11.96□□□□□ -0.49
DDR1-236ENST00000431373 SYCNQ0VAF6 134 aa11.96□□□□□ -0.49
DDR1-236ENST00000431373 LINC01561Q8N1V8 128 aa11.96□□□□□ -0.49
DDR1-236ENST00000431373 CARD19Q96LW7 228 aa11.96□□□□□ -0.49
DDR1-236ENST00000431373 GEMIN7Q9H840 131 aaKnown RBP11.96□□□□□ -0.49
DDR1-236ENST00000431373 HSBP1O75506 76 aa11.95□□□□□ -0.5
DDR1-236ENST00000431373 S100A1P23297 94 aa11.95□□□□□ -0.5
DDR1-236ENST00000431373 C2orf48Q96LS8 159 aa11.95□□□□□ -0.5
DDR1-236ENST00000431373 CAMK2N2Q96S95 79 aa11.95□□□□□ -0.5
DDR1-236ENST00000431373 HSPG2P98160 4391 aa11.95□□□□□ -0.5
DDR1-236ENST00000431373 TINCRA0A1B0GVN0 87 aa11.94□□□□□ -0.5
DDR1-236ENST00000431373 ATP6V1G1O75348 118 aa11.93□□□□□ -0.5
DDR1-236ENST00000431373 NDUFA6P56556 154 aa11.93□□□□□ -0.5
DDR1-236ENST00000431373 CHAC1Q9BUX1 264 aa11.93□□□□□ -0.5
DDR1-236ENST00000431373 CDKN2A-AS1Q9UH64 79 aa11.93□□□□□ -0.5
DDR1-236ENST00000431373 SERF1AO75920 110 aa11.92□□□□□ -0.5
DDR1-236ENST00000431373 Q6ZRU5 148 aa11.92□□□□□ -0.5
DDR1-236ENST00000431373 SCXQ7RTU7 201 aa11.92□□□□□ -0.5
DDR1-236ENST00000431373 F8WDY8 70 aa11.91□□□□□ -0.5
DDR1-236ENST00000431373 LINC00310P59036 64 aa11.91□□□□□ -0.5
DDR1-236ENST00000431373 Q8N1X5 172 aa11.91□□□□□ -0.5
DDR1-236ENST00000431373 FAM19A2Q8N3H0 131 aa11.91□□□□□ -0.5
DDR1-236ENST00000431373 LINC00469Q8N7U9 141 aa11.91□□□□□ -0.5
DDR1-236ENST00000431373 PKIGQ9Y2B9 76 aa11.91□□□□□ -0.5
DDR1-236ENST00000431373 DNAH8Q96JB1 4490 aa11.9□□□□□ -0.5
DDR1-236ENST00000431373 PACRGQ96M98 296 aaPredicted RBP11.9□□□□□ -0.5
DDR1-236ENST00000431373 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.9□□□□□ -0.5
DDR1-236ENST00000431373 IGLV5-45A0A087WSX0 123 aa11.89□□□□□ -0.51
DDR1-236ENST00000431373 PANO1I0J062 215 aa11.89□□□□□ -0.51
DDR1-236ENST00000431373 NDUFA1O15239 70 aa11.89□□□□□ -0.51
DDR1-236ENST00000431373 KIAA0087Q14695 138 aa11.89□□□□□ -0.51
DDR1-236ENST00000431373 CIRBP-AS1Q8TBR5 109 aa11.89□□□□□ -0.51
DDR1-236ENST00000431373 IFI27L1Q96BM0 104 aa11.89□□□□□ -0.51
DDR1-236ENST00000431373 SMR3BP02814 79 aaPredicted RBP11.88□□□□□ -0.51
DDR1-236ENST00000431373 IGLC3P0DOY3 106 aa11.88□□□□□ -0.51
DDR1-236ENST00000431373 CIRBPQ14011 172 aaKnown RBP11.88□□□□□ -0.51
DDR1-236ENST00000431373 HIST1H2BKO60814 126 aa11.87□□□□□ -0.51
DDR1-236ENST00000431373 HIST1H2BJP06899 126 aa11.87□□□□□ -0.51
DDR1-236ENST00000431373 PRSS2P07478 247 aa11.87□□□□□ -0.51
DDR1-236ENST00000431373 CHTF8P0CG12 524 aa11.87□□□□□ -0.51
DDR1-236ENST00000431373 HIST1H2BOP23527 126 aa11.87□□□□□ -0.51
DDR1-236ENST00000431373 HIST1H2BBP33778 126 aa11.87□□□□□ -0.51
DDR1-236ENST00000431373 HIST1H2BDP58876 126 aa11.87□□□□□ -0.51
DDR1-236ENST00000431373 HIST1H2BCP62807 126 aa11.87□□□□□ -0.51
DDR1-236ENST00000431373 HIST2H2BEQ16778 126 aa11.87□□□□□ -0.51
DDR1-236ENST00000431373 RNF151Q2KHN1 245 aa11.87□□□□□ -0.51
DDR1-236ENST00000431373 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.87□□□□□ -0.51
DDR1-236ENST00000431373 HIST1H2BHQ93079 126 aa11.87□□□□□ -0.51
DDR1-236ENST00000431373 HIST1H2BNQ99877 126 aa11.87□□□□□ -0.51
DDR1-236ENST00000431373 HIST1H2BMQ99879 126 aa11.87□□□□□ -0.51
DDR1-236ENST00000431373 MRPL35Q9NZE8 188 aaKnown RBP11.87□□□□□ -0.51
DDR1-236ENST00000431373 TOMM7Q9P0U1 55 aa11.87□□□□□ -0.51
DDR1-236ENST00000431373 NUPR1O60356 82 aa11.86□□□□□ -0.51
DDR1-236ENST00000431373 UNQ6190/PRO20217Q6UXQ8 127 aa11.86□□□□□ -0.51
DDR1-236ENST00000431373 Q8IZM0 81 aa11.86□□□□□ -0.51
DDR1-236ENST00000431373 SPACA4Q8TDM5 124 aa11.86□□□□□ -0.51
DDR1-236ENST00000431373 A0A096LNI7 61 aa11.85□□□□□ -0.51
DDR1-236ENST00000431373 IGKV2-24A0A0C4DH68 120 aa11.85□□□□□ -0.51
DDR1-236ENST00000431373 LOC107984640A0A0U1RRK4 108 aa11.85□□□□□ -0.51
DDR1-236ENST00000431373 SMIM1B2RUZ4 78 aa11.85□□□□□ -0.51
DDR1-236ENST00000431373 LEPROTL1O95214 131 aa11.85□□□□□ -0.51
DDR1-236ENST00000431373 DPH3Q96FX2 82 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms