RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 HIST1H2BKO60814 126 aa9.77□□□□□ -0.85
GARNL3-204ENST00000429629 HIST1H2BJP06899 126 aa9.77□□□□□ -0.85
GARNL3-204ENST00000429629 HIST1H2BOP23527 126 aa9.77□□□□□ -0.85
GARNL3-204ENST00000429629 HIST1H2BBP33778 126 aa9.77□□□□□ -0.85
GARNL3-204ENST00000429629 HIST1H2BDP58876 126 aa9.77□□□□□ -0.85
GARNL3-204ENST00000429629 CNBPP62633 177 aaKnown RBP9.77□□□□□ -0.85
GARNL3-204ENST00000429629 HIST1H2BCP62807 126 aa9.77□□□□□ -0.85
GARNL3-204ENST00000429629 HIST2H2BEQ16778 126 aa9.77□□□□□ -0.85
GARNL3-204ENST00000429629 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.77□□□□□ -0.85
GARNL3-204ENST00000429629 HIST1H2BHQ93079 126 aa9.77□□□□□ -0.85
GARNL3-204ENST00000429629 HIST1H2BNQ99877 126 aa9.77□□□□□ -0.85
GARNL3-204ENST00000429629 HIST1H2BMQ99879 126 aa9.77□□□□□ -0.85
GARNL3-204ENST00000429629 PKHD1P08F94 4074 aa9.77□□□□□ -0.85
GARNL3-204ENST00000429629 A0A087WZ39 114 aa9.76□□□□□ -0.85
GARNL3-204ENST00000429629 SERF1AO75920 110 aa9.76□□□□□ -0.85
GARNL3-204ENST00000429629 APOMO95445 188 aa9.76□□□□□ -0.85
GARNL3-204ENST00000429629 HERVK_113P63121 156 aa9.76□□□□□ -0.85
GARNL3-204ENST00000429629 C15orf56Q8N910 161 aa9.76□□□□□ -0.85
GARNL3-204ENST00000429629 F8WDY8 70 aa9.75□□□□□ -0.85
GARNL3-204ENST00000429629 MALP21145 153 aa9.75□□□□□ -0.85
GARNL3-204ENST00000429629 GCSHP23434 173 aa9.75□□□□□ -0.85
GARNL3-204ENST00000429629 TINCRA0A1B0GVN0 87 aa9.74□□□□□ -0.85
GARNL3-204ENST00000429629 hDV102S1A0JD36 115 aa9.74□□□□□ -0.85
GARNL3-204ENST00000429629 LINC00310P59036 64 aa9.74□□□□□ -0.85
GARNL3-204ENST00000429629 PMCHL1Q16048 86 aa9.74□□□□□ -0.85
GARNL3-204ENST00000429629 COA6Q5JTJ3 125 aaKnown RBP9.74□□□□□ -0.85
GARNL3-204ENST00000429629 OR10D4PQ8NGN7 298 aa9.74□□□□□ -0.85
GARNL3-204ENST00000429629 IGHV3-64A0A075B6Q5 118 aa9.73□□□□□ -0.85
GARNL3-204ENST00000429629 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.73□□□□□ -0.85
GARNL3-204ENST00000429629 COX6A2Q02221 97 aa9.73□□□□□ -0.85
GARNL3-204ENST00000429629 ZC2HC1BQ5TFG8 222 aa9.73□□□□□ -0.85
GARNL3-204ENST00000429629 C5orf38Q86SI9 138 aa9.73□□□□□ -0.85
GARNL3-204ENST00000429629 C9orf163Q8N9P6 203 aa9.73□□□□□ -0.85
GARNL3-204ENST00000429629 LRP1BQ9NZR2 4599 aa9.72□□□□□ -0.85
GARNL3-204ENST00000429629 DNAH5Q8TE73 4624 aa9.72□□□□□ -0.85
GARNL3-204ENST00000429629 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.72□□□□□ -0.85
GARNL3-204ENST00000429629 IGLV5-45A0A087WSX0 123 aa9.72□□□□□ -0.85
GARNL3-204ENST00000429629 IFI27L1Q96BM0 104 aa9.72□□□□□ -0.85
GARNL3-204ENST00000429629 PACRGQ96M98 296 aaPredicted RBP9.72□□□□□ -0.85
GARNL3-204ENST00000429629 GEMIN7Q9H840 131 aaKnown RBP9.72□□□□□ -0.85
GARNL3-204ENST00000429629 TRAV12-1A0A0B4J245 112 aa9.71□□□□□ -0.86
GARNL3-204ENST00000429629 ZNF561-AS1K7EIQ3 104 aa9.71□□□□□ -0.86
GARNL3-204ENST00000429629 SLPIP03973 132 aa9.71□□□□□ -0.86
GARNL3-204ENST00000429629 FAM19A2Q8N3H0 131 aa9.71□□□□□ -0.86
GARNL3-204ENST00000429629 C2orf48Q96LS8 159 aa9.71□□□□□ -0.86
GARNL3-204ENST00000429629 BIRC6Q9NR09 4857 aa9.71□□□□□ -0.86
GARNL3-204ENST00000429629 A0A0J9YXV3 536 aa9.7□□□□□ -0.86
GARNL3-204ENST00000429629 NUPR1O60356 82 aa9.7□□□□□ -0.86
GARNL3-204ENST00000429629 LEPROTL1O95214 131 aa9.7□□□□□ -0.86
GARNL3-204ENST00000429629 IGLC3P0DOY3 106 aa9.7□□□□□ -0.86
GARNL3-204ENST00000429629 HSPB8Q9UJY1 196 aa9.7□□□□□ -0.86
GARNL3-204ENST00000429629 CDK2AP2O75956 126 aa9.69□□□□□ -0.86
GARNL3-204ENST00000429629 KRTAP10-1P60331 282 aa9.68□□□□□ -0.86
GARNL3-204ENST00000429629 HIGD2BQ4VC39 106 aa9.68□□□□□ -0.86
GARNL3-204ENST00000429629 CDKN2A-AS1Q9UH64 79 aa9.68□□□□□ -0.86
GARNL3-204ENST00000429629 PKIGQ9Y2B9 76 aa9.68□□□□□ -0.86
GARNL3-204ENST00000429629 IGLV4-69A0A075B6H9 119 aa9.67□□□□□ -0.86
GARNL3-204ENST00000429629 FUSP35637 526 aaKnown RBP eCLIP9.67□□□□□ -0.86
GARNL3-204ENST00000429629 NDUFA6P56556 154 aa9.67□□□□□ -0.86
GARNL3-204ENST00000429629 RNF151Q2KHN1 245 aa9.67□□□□□ -0.86
GARNL3-204ENST00000429629 H3BRM9 83 aa9.66□□□□□ -0.86
GARNL3-204ENST00000429629 SPAG11BQ08648 103 aa9.66□□□□□ -0.86
GARNL3-204ENST00000429629 SYCNQ0VAF6 134 aa9.66□□□□□ -0.86
GARNL3-204ENST00000429629 KIAA0087Q14695 138 aa9.66□□□□□ -0.86
GARNL3-204ENST00000429629 SDIM1Q6ZPB5 146 aa9.66□□□□□ -0.86
GARNL3-204ENST00000429629 Q6ZSA8 131 aa9.66□□□□□ -0.86
GARNL3-204ENST00000429629 LINC00469Q8N7U9 141 aa9.66□□□□□ -0.86
GARNL3-204ENST00000429629 ORAOV1Q8WV07 137 aa9.66□□□□□ -0.86
GARNL3-204ENST00000429629 CHTOPQ9Y3Y2 248 aaKnown RBP9.65□□□□□ -0.86
GARNL3-204ENST00000429629 F8VRH5 84 aa9.64□□□□□ -0.87
GARNL3-204ENST00000429629 Q8IZM0 81 aa9.64□□□□□ -0.87
GARNL3-204ENST00000429629 CARD19Q96LW7 228 aa9.64□□□□□ -0.87
GARNL3-204ENST00000429629 MRPL35Q9NZE8 188 aaKnown RBP9.64□□□□□ -0.87
GARNL3-204ENST00000429629 SMIM1B2RUZ4 78 aa9.63□□□□□ -0.87
GARNL3-204ENST00000429629 CAMK2N2Q96S95 79 aa9.63□□□□□ -0.87
GARNL3-204ENST00000429629 CHAC1Q9BUX1 264 aa9.63□□□□□ -0.87
GARNL3-204ENST00000429629 MAP1LC3CQ9BXW4 147 aa9.63□□□□□ -0.87
GARNL3-204ENST00000429629 NDUFA1O15239 70 aa9.62□□□□□ -0.87
GARNL3-204ENST00000429629 PRSS2P07478 247 aa9.62□□□□□ -0.87
GARNL3-204ENST00000429629 FABP4P15090 132 aa9.62□□□□□ -0.87
GARNL3-204ENST00000429629 ZNF22P17026 224 aaPredicted RBP9.62□□□□□ -0.87
GARNL3-204ENST00000429629 IGLV5-39A0A0G2JS06 123 aa9.61□□□□□ -0.87
GARNL3-204ENST00000429629 C11orf86A6NJI1 115 aa9.61□□□□□ -0.87
GARNL3-204ENST00000429629 CXCL5P42830 114 aa9.61□□□□□ -0.87
GARNL3-204ENST00000429629 CIRBPQ14011 172 aaKnown RBP9.61□□□□□ -0.87
GARNL3-204ENST00000429629 ODF1Q14990 250 aa9.61□□□□□ -0.87
GARNL3-204ENST00000429629 C6orf226Q5I0X4 101 aa9.61□□□□□ -0.87
GARNL3-204ENST00000429629 Q6ZRU5 148 aa9.61□□□□□ -0.87
GARNL3-204ENST00000429629 LINC00526Q96FQ7 95 aa9.61□□□□□ -0.87
GARNL3-204ENST00000429629 DNAH8Q96JB1 4490 aa9.61□□□□□ -0.87
GARNL3-204ENST00000429629 TRBV30A0A0K0K1B3 111 aa9.6□□□□□ -0.87
GARNL3-204ENST00000429629 XGP55808 180 aa9.6□□□□□ -0.87
GARNL3-204ENST00000429629 LINC01620Q4KN68 170 aa9.6□□□□□ -0.87
GARNL3-204ENST00000429629 LINC00474Q9P2X8 69 aa9.6□□□□□ -0.87
GARNL3-204ENST00000429629 TLX1NBP0CAT3 122 aa9.59□□□□□ -0.87
GARNL3-204ENST00000429629 PLNP26678 52 aa9.59□□□□□ -0.87
GARNL3-204ENST00000429629 FAM30AQ9NZY2 134 aa9.59□□□□□ -0.87
GARNL3-204ENST00000429629 APOBP04114 4563 aaKnown RBP9.59□□□□□ -0.87
GARNL3-204ENST00000429629 SYS1-DBNDD2H3BUS1 97 aa9.58□□□□□ -0.88
GARNL3-204ENST00000429629 CKS1BP61024 79 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms