RNA–Protein interactions for RNA: ENST00000428534.1

GLI3-202, Transcript of GLI family zinc finger 3, humanhuman

TSL 4

Gene GLI3, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-202ENST00000428534 C15orf56Q8N910 161 aa15.29■□□□□ 0.04
GLI3-202ENST00000428534 CHCHD1Q96BP2 118 aaKnown RBP15.29■□□□□ 0.04
GLI3-202ENST00000428534 ZNF561-AS1K7EIQ3 104 aa15.27■□□□□ 0.04
GLI3-202ENST00000428534 HBDP02042 147 aa15.27■□□□□ 0.04
GLI3-202ENST00000428534 S100A1P23297 94 aa15.27■□□□□ 0.04
GLI3-202ENST00000428534 KRTAP10-1P60331 282 aa15.27■□□□□ 0.04
GLI3-202ENST00000428534 DNAH5Q8TE73 4624 aa15.26■□□□□ 0.03
GLI3-202ENST00000428534 IGHV3OR16-9A0A0B4J2B5 98 aa15.26■□□□□ 0.03
GLI3-202ENST00000428534 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.26■□□□□ 0.03
GLI3-202ENST00000428534 UBE2D1P51668 147 aa15.26■□□□□ 0.03
GLI3-202ENST00000428534 C9orf163Q8N9P6 203 aa15.26■□□□□ 0.03
GLI3-202ENST00000428534 FAM19A3Q7Z5A8 133 aa15.25■□□□□ 0.03
GLI3-202ENST00000428534 BAGE3Q86Y29 109 aa15.25■□□□□ 0.03
GLI3-202ENST00000428534 URB1-AS1Q96HZ7 61 aa15.25■□□□□ 0.03
GLI3-202ENST00000428534 HIGD2BQ4VC39 106 aa15.24■□□□□ 0.03
GLI3-202ENST00000428534 LINC00242Q5T6M2 205 aa15.24■□□□□ 0.03
GLI3-202ENST00000428534 C5orf38Q86SI9 138 aa15.24■□□□□ 0.03
GLI3-202ENST00000428534 LINC00173Q6ZV60 143 aa15.23■□□□□ 0.03
GLI3-202ENST00000428534 LINC01561Q8N1V8 128 aa15.23■□□□□ 0.03
GLI3-202ENST00000428534 PKIGQ9Y2B9 76 aa15.23■□□□□ 0.03
GLI3-202ENST00000428534 ATP5LO75964 103 aa15.22■□□□□ 0.03
GLI3-202ENST00000428534 HERVK_113P63121 156 aa15.22■□□□□ 0.03
GLI3-202ENST00000428534 OR10D4PQ8NGN7 298 aa15.22■□□□□ 0.03
GLI3-202ENST00000428534 PMVKQ15126 192 aa15.21■□□□□ 0.03
GLI3-202ENST00000428534 IGHV3-64A0A075B6Q5 118 aa15.2■□□□□ 0.02
GLI3-202ENST00000428534 A0A087WZ39 114 aa15.2■□□□□ 0.02
GLI3-202ENST00000428534 F8WDY8 70 aa15.2■□□□□ 0.02
GLI3-202ENST00000428534 SCO1O75880 301 aa15.2■□□□□ 0.02
GLI3-202ENST00000428534 GEMIN7Q9H840 131 aaKnown RBP15.2■□□□□ 0.02
GLI3-202ENST00000428534 HSBP1O75506 76 aa15.19■□□□□ 0.02
GLI3-202ENST00000428534 C2orf48Q96LS8 159 aa15.19■□□□□ 0.02
GLI3-202ENST00000428534 A0A096LNJ9 63 aa15.18■□□□□ 0.02
GLI3-202ENST00000428534 PDZD11Q5EBL8 140 aa15.18■□□□□ 0.02
GLI3-202ENST00000428534 CST9LQ9H4G1 147 aa15.18■□□□□ 0.02
GLI3-202ENST00000428534 ZC2HC1BQ5TFG8 222 aa15.17■□□□□ 0.02
GLI3-202ENST00000428534 SLPIP03973 132 aa15.16■□□□□ 0.02
GLI3-202ENST00000428534 COX6A2Q02221 97 aa15.16■□□□□ 0.02
GLI3-202ENST00000428534 Q6ZSA8 131 aa15.16■□□□□ 0.02
GLI3-202ENST00000428534 ORAOV1Q8WV07 137 aa15.16■□□□□ 0.02
GLI3-202ENST00000428534 TINCRA0A1B0GVN0 87 aa15.15■□□□□ 0.02
GLI3-202ENST00000428534 SPAG11BQ08648 103 aa15.15■□□□□ 0.02
GLI3-202ENST00000428534 SYCNQ0VAF6 134 aa15.15■□□□□ 0.02
GLI3-202ENST00000428534 PMCHL1Q16048 86 aa15.15■□□□□ 0.02
GLI3-202ENST00000428534 LINC01620Q4KN68 170 aa15.15■□□□□ 0.02
GLI3-202ENST00000428534 IGLV4-69A0A075B6H9 119 aa15.14■□□□□ 0.01
GLI3-202ENST00000428534 CARD19Q96LW7 228 aa15.14■□□□□ 0.01
GLI3-202ENST00000428534 CAMK2N2Q96S95 79 aa15.14■□□□□ 0.01
GLI3-202ENST00000428534 XGP55808 180 aa15.13■□□□□ 0.01
GLI3-202ENST00000428534 SDIM1Q6ZPB5 146 aa15.13■□□□□ 0.01
GLI3-202ENST00000428534 PACRGQ96M98 296 aaPredicted RBP15.13■□□□□ 0.01
GLI3-202ENST00000428534 A0A0J9YXV3 536 aa15.12■□□□□ 0.01
GLI3-202ENST00000428534 NDUFA6P56556 154 aa15.12■□□□□ 0.01
GLI3-202ENST00000428534 ATP6V1G1O75348 118 aa15.11■□□□□ 0.01
GLI3-202ENST00000428534 FAM30AQ9NZY2 134 aa15.11■□□□□ 0.01
GLI3-202ENST00000428534 SERF1AO75920 110 aa15.09■□□□□ 0.01
GLI3-202ENST00000428534 PRSS2P07478 247 aa15.09■□□□□ 0.01
GLI3-202ENST00000428534 LINC00469Q8N7U9 141 aa15.09■□□□□ 0.01
GLI3-202ENST00000428534 IFI27L1Q96BM0 104 aa15.09■□□□□ 0.01
GLI3-202ENST00000428534 LINC00526Q96FQ7 95 aa15.09■□□□□ 0.01
GLI3-202ENST00000428534 CHAC1Q9BUX1 264 aa15.09■□□□□ 0.01
GLI3-202ENST00000428534 CDKN2A-AS1Q9UH64 79 aa15.09■□□□□ 0.01
GLI3-202ENST00000428534 H3BRM9 83 aa15.08■□□□□ 0
GLI3-202ENST00000428534 NDUFA1O15239 70 aa15.08■□□□□ 0
GLI3-202ENST00000428534 RNF151Q2KHN1 245 aa15.08■□□□□ 0
GLI3-202ENST00000428534 LINC00474Q9P2X8 69 aa15.08■□□□□ 0
GLI3-202ENST00000428534 IGLV5-45A0A087WSX0 123 aa15.07■□□□□ 0
GLI3-202ENST00000428534 Q8N1X5 172 aa15.07■□□□□ 0
GLI3-202ENST00000428534 TRAV12-1A0A0B4J245 112 aa15.06■□□□□ 0
GLI3-202ENST00000428534 LEPROTL1O95214 131 aa15.06■□□□□ 0
GLI3-202ENST00000428534 IGLC3P0DOY3 106 aa15.06■□□□□ 0
GLI3-202ENST00000428534 FAM19A2Q8N3H0 131 aa15.06■□□□□ 0
GLI3-202ENST00000428534 MRPL35Q9NZE8 188 aaKnown RBP15.06■□□□□ 0
GLI3-202ENST00000428534 HIST1H2BKO60814 126 aa15.05■□□□□ -0
GLI3-202ENST00000428534 HIST1H2BJP06899 126 aa15.05■□□□□ -0
GLI3-202ENST00000428534 HIST1H2BOP23527 126 aa15.05■□□□□ -0
GLI3-202ENST00000428534 HIST1H2BBP33778 126 aa15.05■□□□□ -0
GLI3-202ENST00000428534 HIST1H2BDP58876 126 aa15.05■□□□□ -0
GLI3-202ENST00000428534 HIST1H2BCP62807 126 aa15.05■□□□□ -0
GLI3-202ENST00000428534 HIST2H2BEQ16778 126 aa15.05■□□□□ -0
GLI3-202ENST00000428534 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.05■□□□□ -0
GLI3-202ENST00000428534 Q6ZRU5 148 aa15.05■□□□□ -0
GLI3-202ENST00000428534 HIST1H2BHQ93079 126 aa15.05■□□□□ -0
GLI3-202ENST00000428534 HIST1H2BNQ99877 126 aa15.05■□□□□ -0
GLI3-202ENST00000428534 HIST1H2BMQ99879 126 aa15.05■□□□□ -0
GLI3-202ENST00000428534 HSPB8Q9UJY1 196 aa15.05■□□□□ -0
GLI3-202ENST00000428534 HERC1Q15751 4861 aa15.04■□□□□ -0
GLI3-202ENST00000428534 C6orf226Q5I0X4 101 aa15.04■□□□□ -0
GLI3-202ENST00000428534 Q8IZM0 81 aa15.04■□□□□ -0
GLI3-202ENST00000428534 DPH3Q96FX2 82 aa15.04■□□□□ -0
GLI3-202ENST00000428534 LOC107984640A0A0U1RRK4 108 aa15.03■□□□□ -0
GLI3-202ENST00000428534 KIAA0087Q14695 138 aa15.03■□□□□ -0
GLI3-202ENST00000428534 CXCL5P42830 114 aa15.02■□□□□ -0
GLI3-202ENST00000428534 CKS1BP61024 79 aa15.02■□□□□ -0
GLI3-202ENST00000428534 CIRBPQ14011 172 aaKnown RBP15.02■□□□□ -0
GLI3-202ENST00000428534 SCXQ7RTU7 201 aa15.02■□□□□ -0
GLI3-202ENST00000428534 CHTOPQ9Y3Y2 248 aaKnown RBP15.02■□□□□ -0
GLI3-202ENST00000428534 TRBV30A0A0K0K1B3 111 aa15.01□□□□□ -0.01
GLI3-202ENST00000428534 LINC00310P59036 64 aa15.01□□□□□ -0.01
GLI3-202ENST00000428534 CIRBP-AS1Q8TBR5 109 aa15.01□□□□□ -0.01
GLI3-202ENST00000428534 TOMM7Q9P0U1 55 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms